RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 BSDC1Q9NW68 430 aaPredicted RBP21.58■■□□□ 1.05
HSPG2-209ENST00000480900 GGA1Q9UJY5 639 aa21.58■■□□□ 1.05
HSPG2-209ENST00000480900 PTPRCP08575 1304 aa21.57■■□□□ 1.04
HSPG2-209ENST00000480900 YDJCA8MPS7 323 aa21.57■■□□□ 1.04
HSPG2-209ENST00000480900 GRM8O00222 908 aa21.57■■□□□ 1.04
HSPG2-209ENST00000480900 CT47B1P0C2W7 299 aaPredicted RBP21.57■■□□□ 1.04
HSPG2-209ENST00000480900 FAM161AQ3B820 660 aa21.57■■□□□ 1.04
HSPG2-209ENST00000480900 SLC4A10Q6U841 1118 aa21.57■■□□□ 1.04
HSPG2-209ENST00000480900 SSH1Q8WYL5 1049 aa21.57■■□□□ 1.04
HSPG2-209ENST00000480900 SRCIN1Q9C0H9 1055 aa21.57■■□□□ 1.04
HSPG2-209ENST00000480900 RIMBP2O15034 1052 aa21.56■■□□□ 1.04
HSPG2-209ENST00000480900 RAD17O75943 681 aa21.56■■□□□ 1.04
HSPG2-209ENST00000480900 EPS15P42566 896 aa21.56■■□□□ 1.04
HSPG2-209ENST00000480900 ALDH1L2Q3SY69 923 aa21.56■■□□□ 1.04
HSPG2-209ENST00000480900 DBNDD1Q9H9R9 158 aa21.56■■□□□ 1.04
HSPG2-209ENST00000480900 GPRC5DQ9NZD1 345 aa21.56■■□□□ 1.04
HSPG2-209ENST00000480900 ITGA6P23229 1130 aa21.55■■□□□ 1.04
HSPG2-209ENST00000480900 IGHMBP2P38935 993 aaKnown RBP21.55■■□□□ 1.04
HSPG2-209ENST00000480900 DNAJC5GQ8N7S2 189 aa21.55■■□□□ 1.04
HSPG2-209ENST00000480900 ZC3H12CQ9C0D7 883 aaKnown RBP21.55■■□□□ 1.04
HSPG2-209ENST00000480900 MINPP1Q9UNW1 487 aa21.55■■□□□ 1.04
HSPG2-209ENST00000480900 A0A1B0GUL6 1792 aa21.55■■□□□ 1.04
HSPG2-209ENST00000480900 ECE2O60344 883 aa21.54■■□□□ 1.04
HSPG2-209ENST00000480900 ATP2B4P23634 1241 aa21.54■■□□□ 1.04
HSPG2-209ENST00000480900 GMPSP49915 693 aaPredicted RBP21.54■■□□□ 1.04
HSPG2-209ENST00000480900 FOXO4P98177 505 aa21.54■■□□□ 1.04
HSPG2-209ENST00000480900 GPR101Q96P66 508 aaPredicted RBP21.54■■□□□ 1.04
HSPG2-209ENST00000480900 C9orf78Q9NZ63 289 aaPredicted RBP21.54■■□□□ 1.04
HSPG2-209ENST00000480900 CLEC11AQ9Y240 323 aa21.54■■□□□ 1.04
HSPG2-209ENST00000480900 HTRA3P83110 453 aa21.53■■□□□ 1.04
HSPG2-209ENST00000480900 USP50Q70EL3 339 aaPredicted RBP21.53■■□□□ 1.04
HSPG2-209ENST00000480900 PASKQ96RG2 1323 aa21.53■■□□□ 1.04
HSPG2-209ENST00000480900 DOK7Q18PE1 504 aa21.52■■□□□ 1.04
HSPG2-209ENST00000480900 BCL2L13Q9BXK5 485 aa21.52■■□□□ 1.04
HSPG2-209ENST00000480900 ADARB2Q9NS39 739 aaKnown RBP21.52■■□□□ 1.04
HSPG2-209ENST00000480900 SMC4Q9NTJ3 1288 aa21.52■■□□□ 1.04
HSPG2-209ENST00000480900 TRPM7Q96QT4 1865 aa21.52■■□□□ 1.03
HSPG2-209ENST00000480900 ANKRD18BA2A2Z9 1011 aa21.51■■□□□ 1.03
HSPG2-209ENST00000480900 PSMD14O00487 310 aa21.51■■□□□ 1.03
HSPG2-209ENST00000480900 MPHOSPH8Q99549 860 aa21.51■■□□□ 1.03
HSPG2-209ENST00000480900 UTYO14607 1347 aa21.51■■□□□ 1.03
HSPG2-209ENST00000480900 MED23Q9ULK4 1368 aa21.5■■□□□ 1.03
HSPG2-209ENST00000480900 ITGBL1O95965 494 aaPredicted RBP21.5■■□□□ 1.03
HSPG2-209ENST00000480900 CCT4P50991 539 aaKnown RBP21.5■■□□□ 1.03
HSPG2-209ENST00000480900 IFIT5Q13325 482 aaKnown RBP21.5■■□□□ 1.03
HSPG2-209ENST00000480900 G3V3G9 751 aa21.49■■□□□ 1.03
HSPG2-209ENST00000480900 EPHA10Q5JZY3 1008 aa21.49■■□□□ 1.03
HSPG2-209ENST00000480900 DCAF8Q5TAQ9 597 aa21.49■■□□□ 1.03
HSPG2-209ENST00000480900 MAP1SQ66K74 1059 aaPredicted RBP21.49■■□□□ 1.03
HSPG2-209ENST00000480900 LMBR1LQ6UX01 489 aa21.49■■□□□ 1.03
HSPG2-209ENST00000480900 CNTROBQ8N137 903 aa21.49■■□□□ 1.03
HSPG2-209ENST00000480900 DPF2Q92785 391 aa21.49■■□□□ 1.03
HSPG2-209ENST00000480900 KLRG1Q96E93 195 aa21.49■■□□□ 1.03
HSPG2-209ENST00000480900 ANKRD2Q9GZV1 360 aa21.49■■□□□ 1.03
HSPG2-209ENST00000480900 CHMP3Q9Y3E7 222 aa21.49■■□□□ 1.03
HSPG2-209ENST00000480900 POLR2AP24928 1970 aaKnown RBP21.48■■□□□ 1.03
HSPG2-209ENST00000480900 RPS12P25398 132 aaKnown RBP21.48■■□□□ 1.03
HSPG2-209ENST00000480900 CREBZFQ9NS37 354 aa21.48■■□□□ 1.03
HSPG2-209ENST00000480900 LEMD3Q9Y2U8 911 aa21.48■■□□□ 1.03
HSPG2-209ENST00000480900 ZNF646O15015 1829 aaPredicted RBP21.48■■□□□ 1.03
HSPG2-209ENST00000480900 ZNF609O15014 1411 aa21.47■■□□□ 1.03
HSPG2-209ENST00000480900 BRPF1P55201 1214 aaPredicted RBP21.47■■□□□ 1.03
HSPG2-209ENST00000480900 KCNQ5Q9NR82 932 aa21.47■■□□□ 1.03
HSPG2-209ENST00000480900 CNOT7Q9UIV1 285 aaKnown RBP21.47■■□□□ 1.03
HSPG2-209ENST00000480900 H7C1D1 291 aa21.46■■□□□ 1.03
HSPG2-209ENST00000480900 VIL1P09327 827 aaKnown RBP21.46■■□□□ 1.03
HSPG2-209ENST00000480900 NBPF7P0C2Y1 421 aaPredicted RBP21.46■■□□□ 1.03
HSPG2-209ENST00000480900 CCDC57Q2TAC2 916 aa21.46■■□□□ 1.03
HSPG2-209ENST00000480900 MICALL2Q8IY33 904 aa21.46■■□□□ 1.03
HSPG2-209ENST00000480900 SUCLG2Q96I99 432 aa21.46■■□□□ 1.03
HSPG2-209ENST00000480900 ZBTB12Q9Y330 459 aaPredicted RBP21.46■■□□□ 1.03
HSPG2-209ENST00000480900 WTIPA6NIX2 430 aaPredicted RBP21.45■■□□□ 1.02
HSPG2-209ENST00000480900 CHRNDQ07001 517 aa21.45■■□□□ 1.02
HSPG2-209ENST00000480900 PODNQ7Z5L7 613 aa21.45■■□□□ 1.02
HSPG2-209ENST00000480900 KAZALD1Q96I82 304 aa21.45■■□□□ 1.02
HSPG2-209ENST00000480900 ZNF804BA4D1E1 1349 aa21.45■■□□□ 1.02
HSPG2-209ENST00000480900 ZC3H15Q8WU90 426 aaKnown RBP21.44■■□□□ 1.02
HSPG2-209ENST00000480900 SHTN1A0MZ66 631 aa21.43■■□□□ 1.02
HSPG2-209ENST00000480900 RARSP54136 660 aaKnown RBP21.43■■□□□ 1.02
HSPG2-209ENST00000480900 HNRNPUQ00839 825 aaKnown RBP eCLIP21.43■■□□□ 1.02
HSPG2-209ENST00000480900 RABL6Q3YEC7 729 aaPredicted RBP21.43■■□□□ 1.02
HSPG2-209ENST00000480900 TAF7LQ5H9L4 462 aa21.43■■□□□ 1.02
HSPG2-209ENST00000480900 JMYQ8N9B5 988 aa21.43■■□□□ 1.02
HSPG2-209ENST00000480900 TRPM4Q8TD43 1214 aa21.43■■□□□ 1.02
HSPG2-209ENST00000480900 PGAP2Q9UHJ9 254 aa21.43■■□□□ 1.02
HSPG2-209ENST00000480900 TMEM88BA6NKF7 163 aa21.42■■□□□ 1.02
HSPG2-209ENST00000480900 KCNJ4P48050 445 aa21.42■■□□□ 1.02
HSPG2-209ENST00000480900 AGBL3Q8NEM8 1001 aa21.42■■□□□ 1.02
HSPG2-209ENST00000480900 API5Q9BZZ5 524 aaKnown RBP21.42■■□□□ 1.02
HSPG2-209ENST00000480900 COA1Q9GZY4 146 aa21.42■■□□□ 1.02
HSPG2-209ENST00000480900 USP44Q9H0E7 712 aa21.42■■□□□ 1.02
HSPG2-209ENST00000480900 BICC1Q9H694 974 aaKnown RBP21.42■■□□□ 1.02
HSPG2-209ENST00000480900 KIF16BQ96L93 1317 aa21.41■■□□□ 1.02
HSPG2-209ENST00000480900 USP17L3A6NCW0 530 aa21.41■■□□□ 1.02
HSPG2-209ENST00000480900 USP17L4A6NCW7 530 aa21.41■■□□□ 1.02
HSPG2-209ENST00000480900 HIRAP54198 1017 aaPredicted RBP21.41■■□□□ 1.02
HSPG2-209ENST00000480900 RSBN1LQ6PCB5 846 aaPredicted RBP21.41■■□□□ 1.02
HSPG2-209ENST00000480900 LDHAL6AQ6ZMR3 332 aa21.41■■□□□ 1.02
HSPG2-209ENST00000480900 USP17L1Q7RTZ2 530 aa21.41■■□□□ 1.02
HSPG2-209ENST00000480900 TXNRD3Q86VQ6 643 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms