RNA–Protein interactions for RNA: ENST00000480793.1

R3HDM1-214, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 235 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-214ENST00000480793 C21orf2O43822 256 aa4.93□□□□□ -1.62
R3HDM1-214ENST00000480793 BMP3P12645 472 aa4.93□□□□□ -1.62
R3HDM1-214ENST00000480793 INPP5BP32019 993 aa4.93□□□□□ -1.62
R3HDM1-214ENST00000480793 ZNF124Q15973 351 aa4.93□□□□□ -1.62
R3HDM1-214ENST00000480793 PKN1Q16512 942 aa4.93□□□□□ -1.62
R3HDM1-214ENST00000480793 DUOXA2Q1HG44 320 aa4.93□□□□□ -1.62
R3HDM1-214ENST00000480793 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.93□□□□□ -1.62
R3HDM1-214ENST00000480793 TSEN2Q8NCE0 465 aaKnown RBP4.93□□□□□ -1.62
R3HDM1-214ENST00000480793 GALNT11Q8NCW6 608 aa4.93□□□□□ -1.62
R3HDM1-214ENST00000480793 TRIM33Q9UPN9 1127 aa4.93□□□□□ -1.62
R3HDM1-214ENST00000480793 BCS1LQ9Y276 419 aa4.93□□□□□ -1.62
R3HDM1-214ENST00000480793 LINC01387J3KSC0 135 aa4.92□□□□□ -1.62
R3HDM1-214ENST00000480793 ZBTB7BO15156 539 aaPredicted RBP4.92□□□□□ -1.62
R3HDM1-214ENST00000480793 PRNPP04156 253 aa4.92□□□□□ -1.62
R3HDM1-214ENST00000480793 MSMPQ1L6U9 139 aa4.92□□□□□ -1.62
R3HDM1-214ENST00000480793 AGBL5Q8NDL9 886 aa4.92□□□□□ -1.62
R3HDM1-214ENST00000480793 SCG3Q8WXD2 468 aaKnown RBP4.92□□□□□ -1.62
R3HDM1-214ENST00000480793 MFSD14AQ96MC6 490 aa4.92□□□□□ -1.62
R3HDM1-214ENST00000480793 NSUN5Q96P11 429 aaKnown RBP4.92□□□□□ -1.62
R3HDM1-214ENST00000480793 OSBPL1AQ9BXW6 950 aa4.92□□□□□ -1.62
R3HDM1-214ENST00000480793 KRTAP17-1Q9BYP8 105 aa4.92□□□□□ -1.62
R3HDM1-214ENST00000480793 HIF3AQ9Y2N7 669 aa4.92□□□□□ -1.62
R3HDM1-214ENST00000480793 FOSL1P15407 271 aa4.91□□□□□ -1.62
R3HDM1-214ENST00000480793 CPSF6Q16630 551 aaKnown RBP eCLIP4.91□□□□□ -1.62
R3HDM1-214ENST00000480793 KIAA1211Q6ZU35 1233 aa4.91□□□□□ -1.62
R3HDM1-214ENST00000480793 LARGE2Q8N3Y3 721 aa4.91□□□□□ -1.62
R3HDM1-214ENST00000480793 PALM3A6NDB9 673 aaPredicted RBP4.9□□□□□ -1.63
R3HDM1-214ENST00000480793 RASA1P20936 1047 aa4.9□□□□□ -1.63
R3HDM1-214ENST00000480793 CLDN10P78369 228 aa4.9□□□□□ -1.63
R3HDM1-214ENST00000480793 NEUROD2Q15784 382 aa4.9□□□□□ -1.63
R3HDM1-214ENST00000480793 LCE5AQ5TCM9 118 aa4.9□□□□□ -1.63
R3HDM1-214ENST00000480793 ANKRD34AQ69YU3 496 aa4.9□□□□□ -1.63
R3HDM1-214ENST00000480793 FAM117BQ6P1L5 589 aa4.9□□□□□ -1.63
R3HDM1-214ENST00000480793 KCNK4Q9NYG8 393 aa4.9□□□□□ -1.63
R3HDM1-214ENST00000480793 KRTAP9-7A8MTY7 169 aa4.89□□□□□ -1.63
R3HDM1-214ENST00000480793 GAS2O43903 313 aaKnown RBP4.89□□□□□ -1.63
R3HDM1-214ENST00000480793 FARP2O94887 1054 aaPredicted RBP4.89□□□□□ -1.63
R3HDM1-214ENST00000480793 SOX18P35713 384 aa4.89□□□□□ -1.63
R3HDM1-214ENST00000480793 PREPP48147 710 aa4.89□□□□□ -1.63
R3HDM1-214ENST00000480793 TXNDC11Q6PKC3 985 aa4.89□□□□□ -1.63
R3HDM1-214ENST00000480793 FBXL6Q8N531 539 aa4.89□□□□□ -1.63
R3HDM1-214ENST00000480793 KLHL23Q8NBE8 558 aa4.89□□□□□ -1.63
R3HDM1-214ENST00000480793 FLCNQ8NFG4 579 aa4.89□□□□□ -1.63
R3HDM1-214ENST00000480793 KLK14Q9P0G3 267 aa4.89□□□□□ -1.63
R3HDM1-214ENST00000480793 BIN1O00499 593 aa4.88□□□□□ -1.63
R3HDM1-214ENST00000480793 MICAL2O94851 1124 aa4.88□□□□□ -1.63
R3HDM1-214ENST00000480793 EGFRP00533 1210 aa4.88□□□□□ -1.63
R3HDM1-214ENST00000480793 HOXD8P13378 290 aaPredicted RBP4.88□□□□□ -1.63
R3HDM1-214ENST00000480793 KRTAP19-4Q3LI73 84 aa4.88□□□□□ -1.63
R3HDM1-214ENST00000480793 SIX5Q8N196 739 aa4.88□□□□□ -1.63
R3HDM1-214ENST00000480793 OGFOD1Q8N543 542 aa4.88□□□□□ -1.63
R3HDM1-214ENST00000480793 METTL22Q9BUU2 404 aaPredicted RBP4.88□□□□□ -1.63
R3HDM1-214ENST00000480793 CARD10Q9BWT7 1032 aa4.88□□□□□ -1.63
R3HDM1-214ENST00000480793 BSDC1Q9NW68 430 aaPredicted RBP4.88□□□□□ -1.63
R3HDM1-214ENST00000480793 FSCN2O14926 492 aa4.87□□□□□ -1.63
R3HDM1-214ENST00000480793 MMP20O60882 483 aa4.87□□□□□ -1.63
R3HDM1-214ENST00000480793 XYLBO75191 536 aa4.87□□□□□ -1.63
R3HDM1-214ENST00000480793 PAPLNO95428 1278 aa4.87□□□□□ -1.63
R3HDM1-214ENST00000480793 F13BP05160 661 aa4.87□□□□□ -1.63
R3HDM1-214ENST00000480793 RXRBP28702 533 aa4.87□□□□□ -1.63
R3HDM1-214ENST00000480793 CDC27P30260 824 aa4.87□□□□□ -1.63
R3HDM1-214ENST00000480793 DGKZQ13574 1117 aa4.87□□□□□ -1.63
R3HDM1-214ENST00000480793 COL19A1Q14993 1142 aa4.87□□□□□ -1.63
R3HDM1-214ENST00000480793 FDX2Q6P4F2 183 aa4.87□□□□□ -1.63
R3HDM1-214ENST00000480793 NFXL1Q6ZNB6 911 aa4.87□□□□□ -1.63
R3HDM1-214ENST00000480793 KSR1Q8IVT5 923 aa4.87□□□□□ -1.63
R3HDM1-214ENST00000480793 PLEKHM2Q8IWE5 1019 aa4.87□□□□□ -1.63
R3HDM1-214ENST00000480793 UBASH3BQ8TF42 649 aa4.87□□□□□ -1.63
R3HDM1-214ENST00000480793 ZNF594Q96JF6 807 aaPredicted RBP4.87□□□□□ -1.63
R3HDM1-214ENST00000480793 LACRTQ9GZZ8 138 aa4.87□□□□□ -1.63
R3HDM1-214ENST00000480793 RNF208Q9H0X6 261 aa4.87□□□□□ -1.63
R3HDM1-214ENST00000480793 ALG2Q9H553 416 aa4.87□□□□□ -1.63
R3HDM1-214ENST00000480793 RTCBQ9Y3I0 505 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-214ENST00000480793 USP17L3A6NCW0 530 aa4.86□□□□□ -1.63
R3HDM1-214ENST00000480793 USP17L4A6NCW7 530 aa4.86□□□□□ -1.63
R3HDM1-214ENST00000480793 FAM177BA6PVY3 158 aa4.86□□□□□ -1.63
R3HDM1-214ENST00000480793 SMNDC1O75940 238 aaKnown RBP eCLIP4.86□□□□□ -1.63
R3HDM1-214ENST00000480793 MAP4P27816 1152 aaKnown RBP4.86□□□□□ -1.63
R3HDM1-214ENST00000480793 CDC25BP30305 580 aa4.86□□□□□ -1.63
R3HDM1-214ENST00000480793 USP17L2Q6R6M4 530 aa4.86□□□□□ -1.63
R3HDM1-214ENST00000480793 USP17L1Q7RTZ2 530 aa4.86□□□□□ -1.63
R3HDM1-214ENST00000480793 FOXD4L4Q8WXT5 416 aaPredicted RBP4.86□□□□□ -1.63
R3HDM1-214ENST00000480793 SLC38A3Q99624 504 aa4.86□□□□□ -1.63
R3HDM1-214ENST00000480793 CYP26A1O43174 497 aa4.85□□□□□ -1.63
R3HDM1-214ENST00000480793 CEP135Q66GS9 1140 aa4.85□□□□□ -1.63
R3HDM1-214ENST00000480793 CMTR1Q8N1G2 835 aaKnown RBP4.85□□□□□ -1.63
R3HDM1-214ENST00000480793 SPACA7Q96KW9 195 aa4.85□□□□□ -1.63
R3HDM1-214ENST00000480793 SEC31BQ9NQW1 1179 aa4.85□□□□□ -1.63
R3HDM1-214ENST00000480793 NCANO14594 1321 aa4.84□□□□□ -1.63
R3HDM1-214ENST00000480793 DDX3YO15523 660 aaKnown RBP4.84□□□□□ -1.63
R3HDM1-214ENST00000480793 ADAM11O75078 769 aa4.84□□□□□ -1.63
R3HDM1-214ENST00000480793 ZNF865P0CJ78 1059 aaPredicted RBP4.84□□□□□ -1.63
R3HDM1-214ENST00000480793 RGL4Q8IZJ4 473 aa4.84□□□□□ -1.63
R3HDM1-214ENST00000480793 COL26A1Q96A83 441 aa4.84□□□□□ -1.63
R3HDM1-214ENST00000480793 RUSC1Q9BVN2 902 aa4.84□□□□□ -1.63
R3HDM1-214ENST00000480793 PAK6Q9NQU5 681 aaPredicted RBP4.84□□□□□ -1.63
R3HDM1-214ENST00000480793 MKRN1Q9UHC7 482 aaKnown RBP4.84□□□□□ -1.63
R3HDM1-214ENST00000480793 USP20Q9Y2K6 914 aa4.84□□□□□ -1.63
R3HDM1-214ENST00000480793 PRRG2O14669 202 aa4.83□□□□□ -1.64
R3HDM1-214ENST00000480793 TM4SF5O14894 197 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms