RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 GPS2Q13227 327 aa12.79□□□□□ -0.36
CHD6-208ENST00000480022 AXDND1Q5T1B0 1012 aaPredicted RBP12.79□□□□□ -0.36
CHD6-208ENST00000480022 TRIM66O15016 1216 aa12.79□□□□□ -0.36
CHD6-208ENST00000480022 PALD1Q9ULE6 856 aa12.79□□□□□ -0.36
CHD6-208ENST00000480022 LRRFIP2Q9Y608 721 aaKnown RBP12.79□□□□□ -0.36
CHD6-208ENST00000480022 NPHP1O15259 732 aa12.78□□□□□ -0.36
CHD6-208ENST00000480022 CLCN6P51797 869 aa12.78□□□□□ -0.36
CHD6-208ENST00000480022 CCDC191Q8NCU4 936 aa12.78□□□□□ -0.36
CHD6-208ENST00000480022 NCAPGQ9BPX3 1015 aa12.78□□□□□ -0.36
CHD6-208ENST00000480022 CLIP2Q9UDT6 1046 aa12.78□□□□□ -0.36
CHD6-208ENST00000480022 MRVI1Q9Y6F6 885 aa12.78□□□□□ -0.36
CHD6-208ENST00000480022 F13A1P00488 732 aa12.78□□□□□ -0.36
CHD6-208ENST00000480022 TYRO3Q06418 890 aa12.78□□□□□ -0.36
CHD6-208ENST00000480022 ZSCAN26Q16670 478 aa12.78□□□□□ -0.36
CHD6-208ENST00000480022 GOLGA6L1Q8N7Z2 621 aa12.78□□□□□ -0.36
CHD6-208ENST00000480022 USP27XA6NNY8 438 aa12.77□□□□□ -0.36
CHD6-208ENST00000480022 POLR3GO15318 223 aaPredicted RBP12.77□□□□□ -0.36
CHD6-208ENST00000480022 STX6O43752 255 aa12.77□□□□□ -0.36
CHD6-208ENST00000480022 NEMFO60524 1076 aa12.77□□□□□ -0.36
CHD6-208ENST00000480022 GYS2P54840 703 aa12.77□□□□□ -0.36
CHD6-208ENST00000480022 MAP3K11Q16584 847 aa12.77□□□□□ -0.36
CHD6-208ENST00000480022 FAM43BQ6ZT52 329 aaPredicted RBP12.77□□□□□ -0.36
CHD6-208ENST00000480022 BCL9O00512 1426 aa12.77□□□□□ -0.37
CHD6-208ENST00000480022 ERVV-2B6SEH9 535 aa12.77□□□□□ -0.37
CHD6-208ENST00000480022 VAMP4O75379 141 aa12.77□□□□□ -0.37
CHD6-208ENST00000480022 GUCY2CP25092 1073 aa12.77□□□□□ -0.37
CHD6-208ENST00000480022 ACSBG1Q96GR2 724 aa12.77□□□□□ -0.37
CHD6-208ENST00000480022 CBX8Q9HC52 389 aa12.77□□□□□ -0.37
CHD6-208ENST00000480022 ADAMTS7Q9UKP4 1686 aa12.77□□□□□ -0.37
CHD6-208ENST00000480022 RAD50Q92878 1312 aa12.76□□□□□ -0.37
CHD6-208ENST00000480022 KIF2AO00139 706 aaPredicted RBP12.76□□□□□ -0.37
CHD6-208ENST00000480022 ERCC6LQ2NKX8 1250 aa12.76□□□□□ -0.37
CHD6-208ENST00000480022 ANKRD44Q8N8A2 993 aa12.76□□□□□ -0.37
CHD6-208ENST00000480022 UPF3BQ9BZI7 483 aaKnown RBP12.76□□□□□ -0.37
CHD6-208ENST00000480022 API5Q9BZZ5 524 aaKnown RBP12.76□□□□□ -0.37
CHD6-208ENST00000480022 SLC52A2Q9HAB3 445 aa12.76□□□□□ -0.37
CHD6-208ENST00000480022 LCMT1Q9UIC8 334 aa12.76□□□□□ -0.37
CHD6-208ENST00000480022 DLG5Q8TDM6 1919 aa12.76□□□□□ -0.37
CHD6-208ENST00000480022 CABP4P57796 275 aa12.76□□□□□ -0.37
CHD6-208ENST00000480022 TEFQ10587 303 aa12.76□□□□□ -0.37
CHD6-208ENST00000480022 CCDC144BQ3MJ40 725 aa12.76□□□□□ -0.37
CHD6-208ENST00000480022 CCDC144CPQ8IYA2 1237 aa12.76□□□□□ -0.37
CHD6-208ENST00000480022 SMARCE1Q969G3 411 aa12.76□□□□□ -0.37
CHD6-208ENST00000480022 ESYT1Q9BSJ8 1104 aa12.76□□□□□ -0.37
CHD6-208ENST00000480022 ATG3Q9NT62 314 aa12.76□□□□□ -0.37
CHD6-208ENST00000480022 BRWD3Q6RI45 1802 aa12.76□□□□□ -0.37
CHD6-208ENST00000480022 CDC25BP30305 580 aa12.75□□□□□ -0.37
CHD6-208ENST00000480022 FAM196AQ6ZSG2 479 aa12.75□□□□□ -0.37
CHD6-208ENST00000480022 LRRC8AQ8IWT6 810 aa12.75□□□□□ -0.37
CHD6-208ENST00000480022 NUP62CLQ9H1M0 184 aa12.75□□□□□ -0.37
CHD6-208ENST00000480022 KCNQ2O43526 872 aa12.75□□□□□ -0.37
CHD6-208ENST00000480022 SYT1P21579 422 aa12.75□□□□□ -0.37
CHD6-208ENST00000480022 SRLQ86TD4 932 aa12.75□□□□□ -0.37
CHD6-208ENST00000480022 TDRD7Q8NHU6 1098 aaKnown RBP12.75□□□□□ -0.37
CHD6-208ENST00000480022 SYTL4Q96C24 671 aaPredicted RBP12.75□□□□□ -0.37
CHD6-208ENST00000480022 ARGLU1Q9NWB6 273 aaPredicted RBP12.75□□□□□ -0.37
CHD6-208ENST00000480022 MRC1P22897 1456 aa12.75□□□□□ -0.37
CHD6-208ENST00000480022 TOGARAM1Q9Y4F4 1720 aa12.75□□□□□ -0.37
CHD6-208ENST00000480022 APBB1O00213 710 aa12.75□□□□□ -0.37
CHD6-208ENST00000480022 ZRANB2O95218 330 aaKnown RBP eCLIP12.75□□□□□ -0.37
CHD6-208ENST00000480022 ST5P78524 1137 aa12.75□□□□□ -0.37
CHD6-208ENST00000480022 ANO6Q4KMQ2 910 aa12.75□□□□□ -0.37
CHD6-208ENST00000480022 TMCO3Q6UWJ1 677 aa12.75□□□□□ -0.37
CHD6-208ENST00000480022 ZNF622Q969S3 477 aaKnown RBP eCLIP12.75□□□□□ -0.37
CHD6-208ENST00000480022 IL17RAQ96F46 866 aa12.75□□□□□ -0.37
CHD6-208ENST00000480022 TAF7Q15545 349 aaPredicted RBP12.74□□□□□ -0.37
CHD6-208ENST00000480022 RPAP2Q8IXW5 612 aaPredicted RBP12.74□□□□□ -0.37
CHD6-208ENST00000480022 ANO2Q9NQ90 1003 aa12.74□□□□□ -0.37
CHD6-208ENST00000480022 TMOD3Q9NYL9 352 aa12.74□□□□□ -0.37
CHD6-208ENST00000480022 ELP1O95163 1332 aa12.74□□□□□ -0.37
CHD6-208ENST00000480022 EP400Q96L91 3159 aa12.74□□□□□ -0.37
CHD6-208ENST00000480022 MYCNP04198 464 aaPredicted RBP12.74□□□□□ -0.37
CHD6-208ENST00000480022 SKILP12757 684 aa12.74□□□□□ -0.37
CHD6-208ENST00000480022 DNM1Q05193 864 aaKnown RBP12.74□□□□□ -0.37
CHD6-208ENST00000480022 FILIP1Q7Z7B0 1213 aa12.74□□□□□ -0.37
CHD6-208ENST00000480022 FBXO18Q8NFZ0 1043 aa12.74□□□□□ -0.37
CHD6-208ENST00000480022 GOLGA5Q8TBA6 731 aa12.74□□□□□ -0.37
CHD6-208ENST00000480022 PIGBQ92521 554 aa12.74□□□□□ -0.37
CHD6-208ENST00000480022 L2HGDHQ9H9P8 463 aa12.74□□□□□ -0.37
CHD6-208ENST00000480022 MIS18AQ9NYP9 233 aa12.74□□□□□ -0.37
CHD6-208ENST00000480022 RRP15Q9Y3B9 282 aaKnown RBP12.74□□□□□ -0.37
CHD6-208ENST00000480022 A0A1B0GUL7 405 aa12.73□□□□□ -0.37
CHD6-208ENST00000480022 ZNF853P0CG23 659 aa12.73□□□□□ -0.37
CHD6-208ENST00000480022 NOM1Q5C9Z4 860 aaKnown RBP12.73□□□□□ -0.37
CHD6-208ENST00000480022 PTF1AQ7RTS3 328 aa12.73□□□□□ -0.37
CHD6-208ENST00000480022 OSBPL3Q9H4L5 887 aa12.73□□□□□ -0.37
CHD6-208ENST00000480022 TRMT1Q9NXH9 659 aaKnown RBP12.73□□□□□ -0.37
CHD6-208ENST00000480022 JRKLQ9Y4A0 524 aa12.73□□□□□ -0.37
CHD6-208ENST00000480022 SCN11AQ9UI33 1791 aa12.73□□□□□ -0.37
CHD6-208ENST00000480022 SETQ01105 290 aaPredicted RBP12.73□□□□□ -0.37
CHD6-208ENST00000480022 ARHGAP29Q52LW3 1261 aa12.73□□□□□ -0.37
CHD6-208ENST00000480022 CCAR2Q8N163 923 aaKnown RBP12.73□□□□□ -0.37
CHD6-208ENST00000480022 ATP10DQ9P241 1426 aa12.72□□□□□ -0.37
CHD6-208ENST00000480022 BTBD11A6QL63 1104 aa12.72□□□□□ -0.37
CHD6-208ENST00000480022 CAMK4Q16566 473 aa12.72□□□□□ -0.37
CHD6-208ENST00000480022 EXOC6BQ9Y2D4 811 aa12.72□□□□□ -0.37
CHD6-208ENST00000480022 DOT1LQ8TEK3 1739 aa12.72□□□□□ -0.37
CHD6-208ENST00000480022 CHL1O00533 1208 aa12.72□□□□□ -0.37
CHD6-208ENST00000480022 ATP8B1O43520 1251 aa12.72□□□□□ -0.37
CHD6-208ENST00000480022 TSPYL6Q8N831 410 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms