RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 PODXL2Q9NZ53 605 aa31.25■■■□□ 2.59
PERM1-203ENST00000479361 PRELPP51888 382 aa31.24■■■□□ 2.59
PERM1-203ENST00000479361 ZNF594Q96JF6 807 aaPredicted RBP31.24■■■□□ 2.59
PERM1-203ENST00000479361 VPS33BQ9H267 617 aa31.24■■■□□ 2.59
PERM1-203ENST00000479361 XDHP47989 1333 aa31.24■■■□□ 2.59
PERM1-203ENST00000479361 IARSP41252 1262 aaKnown RBP31.23■■■□□ 2.59
PERM1-203ENST00000479361 C20orf194Q5TEA3 1177 aa31.23■■■□□ 2.59
PERM1-203ENST00000479361 ANKRD2Q9GZV1 360 aa31.23■■■□□ 2.59
PERM1-203ENST00000479361 CNNM1Q9NRU3 951 aa31.23■■■□□ 2.59
PERM1-203ENST00000479361 SBF1O95248 1867 aa31.23■■■□□ 2.59
PERM1-203ENST00000479361 YY1P25490 414 aa31.22■■■□□ 2.59
PERM1-203ENST00000479361 SPEF2Q9C093 1822 aa31.21■■■□□ 2.59
PERM1-203ENST00000479361 C6orf229H3BNL8 230 aa31.21■■■□□ 2.59
PERM1-203ENST00000479361 MTX1Q13505 466 aa31.21■■■□□ 2.59
PERM1-203ENST00000479361 GGA1Q9UJY5 639 aa31.21■■■□□ 2.59
PERM1-203ENST00000479361 ZC3H4Q9UPT8 1303 aaKnown RBP31.21■■■□□ 2.59
PERM1-203ENST00000479361 SRGAP3O43295 1099 aa31.19■■■□□ 2.58
PERM1-203ENST00000479361 UFL1O94874 794 aa31.19■■■□□ 2.58
PERM1-203ENST00000479361 ATP2B4P23634 1241 aa31.19■■■□□ 2.58
PERM1-203ENST00000479361 TBC1D16Q8TBP0 767 aa31.19■■■□□ 2.58
PERM1-203ENST00000479361 EYA3Q99504 573 aa31.19■■■□□ 2.58
PERM1-203ENST00000479361 PPIP5K2O43314 1243 aa31.18■■■□□ 2.58
PERM1-203ENST00000479361 RFX5P48382 616 aaPredicted RBP31.18■■■□□ 2.58
PERM1-203ENST00000479361 CHRNDQ07001 517 aa31.18■■■□□ 2.58
PERM1-203ENST00000479361 LARGE2Q8N3Y3 721 aa31.18■■■□□ 2.58
PERM1-203ENST00000479361 POLLQ9UGP5 575 aa31.18■■■□□ 2.58
PERM1-203ENST00000479361 DUOX1Q9NRD9 1551 aa31.17■■■□□ 2.58
PERM1-203ENST00000479361 WASHC4Q2M389 1173 aa31.17■■■□□ 2.58
PERM1-203ENST00000479361 JDP2Q8WYK2 163 aa31.17■■■□□ 2.58
PERM1-203ENST00000479361 LTBP1Q14766 1721 aa31.17■■■□□ 2.58
PERM1-203ENST00000479361 PTPN12Q05209 780 aaKnown RBP31.16■■■□□ 2.58
PERM1-203ENST00000479361 KIAA2012Q0VF49 1180 aa31.16■■■□□ 2.58
PERM1-203ENST00000479361 AOC3Q16853 763 aa31.16■■■□□ 2.58
PERM1-203ENST00000479361 C1orf115Q9H7X2 142 aa31.16■■■□□ 2.58
PERM1-203ENST00000479361 LEMD3Q9Y2U8 911 aa31.16■■■□□ 2.58
PERM1-203ENST00000479361 CCDC88AQ3V6T2 1871 aa31.15■■■□□ 2.58
PERM1-203ENST00000479361 KLHDC4Q8TBB5 520 aa31.15■■■□□ 2.58
PERM1-203ENST00000479361 ZBTB40Q9NUA8 1239 aa31.15■■■□□ 2.58
PERM1-203ENST00000479361 FBXO3Q9UK99 471 aa31.15■■■□□ 2.58
PERM1-203ENST00000479361 RIPOR2Q9Y4F9 1068 aa31.15■■■□□ 2.58
PERM1-203ENST00000479361 MROH5Q6ZUA9 1318 aa31.15■■■□□ 2.58
PERM1-203ENST00000479361 PUS3Q9BZE2 481 aaKnown RBP31.14■■■□□ 2.58
PERM1-203ENST00000479361 ZC3H12CQ9C0D7 883 aaKnown RBP31.14■■■□□ 2.58
PERM1-203ENST00000479361 KCNJ4P48050 445 aa31.13■■■□□ 2.57
PERM1-203ENST00000479361 NIM1KQ8IY84 436 aa31.13■■■□□ 2.57
PERM1-203ENST00000479361 COPRSQ9NQ92 184 aa31.13■■■□□ 2.57
PERM1-203ENST00000479361 DICER1Q9UPY3 1922 aaKnown RBP31.13■■■□□ 2.57
PERM1-203ENST00000479361 EYA2O00167 538 aa31.12■■■□□ 2.57
PERM1-203ENST00000479361 ATP8B2P98198 1209 aa31.12■■■□□ 2.57
PERM1-203ENST00000479361 LRRC24Q50LG9 513 aa31.12■■■□□ 2.57
PERM1-203ENST00000479361 ZNF804BA4D1E1 1349 aa31.11■■■□□ 2.57
PERM1-203ENST00000479361 CIAO1O76071 339 aa31.11■■■□□ 2.57
PERM1-203ENST00000479361 METTL24Q5JXM2 366 aa31.11■■■□□ 2.57
PERM1-203ENST00000479361 HELBQ8NG08 1087 aaPredicted RBP31.11■■■□□ 2.57
PERM1-203ENST00000479361 TIAM2Q8IVF5 1701 aa31.1■■■□□ 2.57
PERM1-203ENST00000479361 PNMA6EA0A0J9YXQ4 647 aa31.1■■■□□ 2.57
PERM1-203ENST00000479361 TAF5LO75529 589 aa31.1■■■□□ 2.57
PERM1-203ENST00000479361 SIL1Q9H173 461 aa31.1■■■□□ 2.57
PERM1-203ENST00000479361 SUPT16HQ9Y5B9 1047 aaKnown RBP31.1■■■□□ 2.57
PERM1-203ENST00000479361 RIMBP2O15034 1052 aa31.09■■■□□ 2.57
PERM1-203ENST00000479361 CEP85Q6P2H3 762 aa31.09■■■□□ 2.57
PERM1-203ENST00000479361 GPR101Q96P66 508 aaPredicted RBP31.09■■■□□ 2.57
PERM1-203ENST00000479361 MED23Q9ULK4 1368 aa31.08■■■□□ 2.57
PERM1-203ENST00000479361 DPY19L2Q6NUT2 758 aa31.08■■■□□ 2.57
PERM1-203ENST00000479361 SSH3Q8TE77 659 aa31.08■■■□□ 2.57
PERM1-203ENST00000479361 PA2G4Q9UQ80 394 aaKnown RBP31.08■■■□□ 2.57
PERM1-203ENST00000479361 G3V3G9 751 aa31.07■■■□□ 2.56
PERM1-203ENST00000479361 FZD9O00144 591 aa31.07■■■□□ 2.56
PERM1-203ENST00000479361 IL15P40933 162 aaPredicted RBP31.07■■■□□ 2.56
PERM1-203ENST00000479361 DCAF8Q5TAQ9 597 aa31.07■■■□□ 2.56
PERM1-203ENST00000479361 ZNRF3Q9ULT6 936 aa31.07■■■□□ 2.56
PERM1-203ENST00000479361 EIF6P56537 245 aaKnown RBP31.06■■■□□ 2.56
PERM1-203ENST00000479361 POLA2Q14181 598 aa31.06■■■□□ 2.56
PERM1-203ENST00000479361 RPAP2Q8IXW5 612 aaPredicted RBP31.06■■■□□ 2.56
PERM1-203ENST00000479361 COL4A5P29400 1685 aa31.06■■■□□ 2.56
PERM1-203ENST00000479361 WTIPA6NIX2 430 aaPredicted RBP31.05■■■□□ 2.56
PERM1-203ENST00000479361 PDE8BO95263 885 aa31.05■■■□□ 2.56
PERM1-203ENST00000479361 UBE4AQ14139 1066 aa31.05■■■□□ 2.56
PERM1-203ENST00000479361 ATG9AQ7Z3C6 839 aa31.05■■■□□ 2.56
PERM1-203ENST00000479361 KDM2BQ8NHM5 1336 aa31.04■■■□□ 2.56
PERM1-203ENST00000479361 GLTPD2A6NH11 291 aa31.03■■■□□ 2.56
PERM1-203ENST00000479361 C15orf52Q6ZUT6 534 aaKnown RBP31.03■■■□□ 2.56
PERM1-203ENST00000479361 VGLL2Q8N8G2 317 aa31.03■■■□□ 2.56
PERM1-203ENST00000479361 CEP126Q9P2H0 1117 aa31.03■■■□□ 2.56
PERM1-203ENST00000479361 A0A1B0GUL6 1792 aa31.02■■■□□ 2.56
PERM1-203ENST00000479361 HMMRO75330 724 aa31.02■■■□□ 2.56
PERM1-203ENST00000479361 DOK7Q18PE1 504 aa31.02■■■□□ 2.56
PERM1-203ENST00000479361 CRBNQ96SW2 442 aa31.02■■■□□ 2.56
PERM1-203ENST00000479361 DBNDD1Q9H9R9 158 aa31.02■■■□□ 2.56
PERM1-203ENST00000479361 SNAP23O00161 211 aa31.01■■■□□ 2.55
PERM1-203ENST00000479361 ECE2O60344 883 aa31.01■■■□□ 2.55
PERM1-203ENST00000479361 G3BP1Q13283 466 aaKnown RBP eCLIP31.01■■■□□ 2.55
PERM1-203ENST00000479361 PUM3Q15397 648 aaKnown RBP31.01■■■□□ 2.55
PERM1-203ENST00000479361 ZNF784Q8NCA9 323 aaPredicted RBP31■■■□□ 2.55
PERM1-203ENST00000479361 ZNF526Q8TF50 670 aaPredicted RBP31■■■□□ 2.55
PERM1-203ENST00000479361 ZNF541Q9H0D2 1346 aa30.99■■■□□ 2.55
PERM1-203ENST00000479361 COA1Q9GZY4 146 aa30.99■■■□□ 2.55
PERM1-203ENST00000479361 SURF6O75683 361 aaKnown RBP30.98■■■□□ 2.55
PERM1-203ENST00000479361 KLRK1P26718 216 aa30.98■■■□□ 2.55
PERM1-203ENST00000479361 PODNQ7Z5L7 613 aa30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms