RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 RASSF7Q02833 373 aa17.43■□□□□ 0.38
PCIF1-202ENST00000479348 ZNF594Q96JF6 807 aaPredicted RBP17.43■□□□□ 0.38
PCIF1-202ENST00000479348 CNNM1Q9NRU3 951 aa17.43■□□□□ 0.38
PCIF1-202ENST00000479348 ANKIB1Q9P2G1 1089 aa17.43■□□□□ 0.38
PCIF1-202ENST00000479348 SUPT16HQ9Y5B9 1047 aaKnown RBP17.43■□□□□ 0.38
PCIF1-202ENST00000479348 SRGAP3O43295 1099 aa17.42■□□□□ 0.38
PCIF1-202ENST00000479348 ATP2B4P23634 1241 aa17.42■□□□□ 0.38
PCIF1-202ENST00000479348 ATP8B2P98198 1209 aa17.42■□□□□ 0.38
PCIF1-202ENST00000479348 PTPN12Q05209 780 aaKnown RBP17.42■□□□□ 0.38
PCIF1-202ENST00000479348 IARSP41252 1262 aaKnown RBP17.41■□□□□ 0.38
PCIF1-202ENST00000479348 C9orf131Q5VYM1 1079 aa17.41■□□□□ 0.38
PCIF1-202ENST00000479348 COPRSQ9NQ92 184 aa17.41■□□□□ 0.38
PCIF1-202ENST00000479348 RNF181Q9P0P0 153 aa17.41■□□□□ 0.38
PCIF1-202ENST00000479348 GGA1Q9UJY5 639 aa17.41■□□□□ 0.38
PCIF1-202ENST00000479348 LEMD3Q9Y2U8 911 aa17.41■□□□□ 0.38
PCIF1-202ENST00000479348 RIPOR2Q9Y4F9 1068 aa17.41■□□□□ 0.38
PCIF1-202ENST00000479348 CHD4Q14839 1912 aa17.41■□□□□ 0.38
PCIF1-202ENST00000479348 MROH5Q6ZUA9 1318 aa17.4■□□□□ 0.38
PCIF1-202ENST00000479348 ZC3H4Q9UPT8 1303 aaKnown RBP17.4■□□□□ 0.38
PCIF1-202ENST00000479348 C6orf229H3BNL8 230 aa17.4■□□□□ 0.38
PCIF1-202ENST00000479348 CIAO1O76071 339 aa17.4■□□□□ 0.38
PCIF1-202ENST00000479348 CHRNDQ07001 517 aa17.4■□□□□ 0.38
PCIF1-202ENST00000479348 SLC51AQ86UW1 340 aa17.4■□□□□ 0.38
PCIF1-202ENST00000479348 RPAP2Q8IXW5 612 aaPredicted RBP17.4■□□□□ 0.38
PCIF1-202ENST00000479348 TBC1D16Q8TBP0 767 aa17.4■□□□□ 0.38
PCIF1-202ENST00000479348 EYA3Q99504 573 aa17.4■□□□□ 0.38
PCIF1-202ENST00000479348 ZNF277Q9NRM2 450 aaPredicted RBP17.4■□□□□ 0.38
PCIF1-202ENST00000479348 EYA2O00167 538 aa17.39■□□□□ 0.37
PCIF1-202ENST00000479348 PRELPP51888 382 aa17.39■□□□□ 0.37
PCIF1-202ENST00000479348 AAMPQ13685 434 aa17.39■□□□□ 0.37
PCIF1-202ENST00000479348 POLA2Q14181 598 aa17.39■□□□□ 0.37
PCIF1-202ENST00000479348 CEP85Q6P2H3 762 aa17.39■□□□□ 0.37
PCIF1-202ENST00000479348 SSH3Q8TE77 659 aa17.39■□□□□ 0.37
PCIF1-202ENST00000479348 PUS3Q9BZE2 481 aaKnown RBP17.39■□□□□ 0.37
PCIF1-202ENST00000479348 C1orf115Q9H7X2 142 aa17.39■□□□□ 0.37
PCIF1-202ENST00000479348 POLLQ9UGP5 575 aa17.39■□□□□ 0.37
PCIF1-202ENST00000479348 SBF1O95248 1867 aa17.39■□□□□ 0.37
PCIF1-202ENST00000479348 PNMA6EA0A0J9YXQ4 647 aa17.38■□□□□ 0.37
PCIF1-202ENST00000479348 UFL1O94874 794 aa17.38■□□□□ 0.37
PCIF1-202ENST00000479348 KIAA2012Q0VF49 1180 aa17.38■□□□□ 0.37
PCIF1-202ENST00000479348 WASHC4Q2M389 1173 aa17.38■□□□□ 0.37
PCIF1-202ENST00000479348 KLHDC4Q8TBB5 520 aa17.38■□□□□ 0.37
PCIF1-202ENST00000479348 JDP2Q8WYK2 163 aa17.38■□□□□ 0.37
PCIF1-202ENST00000479348 SPEF2Q9C093 1822 aa17.38■□□□□ 0.37
PCIF1-202ENST00000479348 LTBP1Q14766 1721 aa17.38■□□□□ 0.37
PCIF1-202ENST00000479348 PPIP5K2O43314 1243 aa17.37■□□□□ 0.37
PCIF1-202ENST00000479348 IL15P40933 162 aaPredicted RBP17.37■□□□□ 0.37
PCIF1-202ENST00000479348 LRRC24Q50LG9 513 aa17.37■□□□□ 0.37
PCIF1-202ENST00000479348 LARGE2Q8N3Y3 721 aa17.37■□□□□ 0.37
PCIF1-202ENST00000479348 ZC3H12CQ9C0D7 883 aaKnown RBP17.37■□□□□ 0.37
PCIF1-202ENST00000479348 DUOX1Q9NRD9 1551 aa17.36■□□□□ 0.37
PCIF1-202ENST00000479348 ZNF804BA4D1E1 1349 aa17.36■□□□□ 0.37
PCIF1-202ENST00000479348 HMMRO75330 724 aa17.36■□□□□ 0.37
PCIF1-202ENST00000479348 KCNJ4P48050 445 aa17.36■□□□□ 0.37
PCIF1-202ENST00000479348 UBE4AQ14139 1066 aa17.36■□□□□ 0.37
PCIF1-202ENST00000479348 AOC3Q16853 763 aa17.36■□□□□ 0.37
PCIF1-202ENST00000479348 METTL24Q5JXM2 366 aa17.36■□□□□ 0.37
PCIF1-202ENST00000479348 ATG9AQ7Z3C6 839 aa17.36■□□□□ 0.37
PCIF1-202ENST00000479348 C15orf52Q6ZUT6 534 aaKnown RBP17.35■□□□□ 0.37
PCIF1-202ENST00000479348 NIM1KQ8IY84 436 aa17.35■□□□□ 0.37
PCIF1-202ENST00000479348 HELBQ8NG08 1087 aaPredicted RBP17.35■□□□□ 0.37
PCIF1-202ENST00000479348 CRBNQ96SW2 442 aa17.35■□□□□ 0.37
PCIF1-202ENST00000479348 SIL1Q9H173 461 aa17.35■□□□□ 0.37
PCIF1-202ENST00000479348 PA2G4Q9UQ80 394 aaKnown RBP17.35■□□□□ 0.37
PCIF1-202ENST00000479348 MED23Q9ULK4 1368 aa17.35■□□□□ 0.37
PCIF1-202ENST00000479348 DICER1Q9UPY3 1922 aaKnown RBP17.34■□□□□ 0.37
PCIF1-202ENST00000479348 TAF5LO75529 589 aa17.34■□□□□ 0.37
PCIF1-202ENST00000479348 PDE8BO95263 885 aa17.34■□□□□ 0.37
PCIF1-202ENST00000479348 CENPBP07199 599 aaPredicted RBP17.34■□□□□ 0.37
PCIF1-202ENST00000479348 G3BP1Q13283 466 aaKnown RBP eCLIP17.34■□□□□ 0.37
PCIF1-202ENST00000479348 CCDC88AQ3V6T2 1871 aa17.34■□□□□ 0.37
PCIF1-202ENST00000479348 CEP126Q9P2H0 1117 aa17.34■□□□□ 0.37
PCIF1-202ENST00000479348 NOP58Q9Y2X3 529 aaKnown RBP17.34■□□□□ 0.37
PCIF1-202ENST00000479348 FZD9O00144 591 aa17.33■□□□□ 0.36
PCIF1-202ENST00000479348 VGLL2Q8N8G2 317 aa17.33■□□□□ 0.36
PCIF1-202ENST00000479348 ZNRF3Q9ULT6 936 aa17.33■□□□□ 0.36
PCIF1-202ENST00000479348 G3V3G9 751 aa17.32■□□□□ 0.36
PCIF1-202ENST00000479348 RIMBP2O15034 1052 aa17.32■□□□□ 0.36
PCIF1-202ENST00000479348 YY1P25490 414 aa17.32■□□□□ 0.36
PCIF1-202ENST00000479348 HSP90AB4PQ58FF6 505 aa17.32■□□□□ 0.36
PCIF1-202ENST00000479348 DCAF8Q5TAQ9 597 aa17.32■□□□□ 0.36
PCIF1-202ENST00000479348 DPY19L2Q6NUT2 758 aa17.32■□□□□ 0.36
PCIF1-202ENST00000479348 GOLGB1Q14789 3259 aaKnown RBP17.32■□□□□ 0.36
PCIF1-202ENST00000479348 SURF6O75683 361 aaKnown RBP17.31■□□□□ 0.36
PCIF1-202ENST00000479348 EIF6P56537 245 aaKnown RBP17.31■□□□□ 0.36
PCIF1-202ENST00000479348 PUM3Q15397 648 aaKnown RBP17.31■□□□□ 0.36
PCIF1-202ENST00000479348 SIRT2Q8IXJ6 389 aa17.31■□□□□ 0.36
PCIF1-202ENST00000479348 WTIPA6NIX2 430 aaPredicted RBP17.3■□□□□ 0.36
PCIF1-202ENST00000479348 PODNQ7Z5L7 613 aa17.3■□□□□ 0.36
PCIF1-202ENST00000479348 GPR101Q96P66 508 aaPredicted RBP17.3■□□□□ 0.36
PCIF1-202ENST00000479348 COA1Q9GZY4 146 aa17.3■□□□□ 0.36
PCIF1-202ENST00000479348 AKAP2Q9Y2D5 859 aa17.3■□□□□ 0.36
PCIF1-202ENST00000479348 A0A1B0GUL6 1792 aa17.29■□□□□ 0.36
PCIF1-202ENST00000479348 GLTPD2A6NH11 291 aa17.29■□□□□ 0.36
PCIF1-202ENST00000479348 IFIT1P09914 478 aaKnown RBP17.29■□□□□ 0.36
PCIF1-202ENST00000479348 FGFR2P21802 821 aa17.29■□□□□ 0.36
PCIF1-202ENST00000479348 OS9Q13438 667 aaPredicted RBP17.29■□□□□ 0.36
PCIF1-202ENST00000479348 ERC1Q8IUD2 1116 aa17.29■□□□□ 0.36
PCIF1-202ENST00000479348 LPIN2Q92539 896 aa17.29■□□□□ 0.36
PCIF1-202ENST00000479348 IRS2Q9Y4H2 1338 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms