RNA–Protein interactions for RNA: ENST00000479294.2

SRRM3-203, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 2

Gene SRRM3, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-203ENST00000479294 IGHMBP2P38935 993 aaKnown RBP28.72■■■□□ 2.19
SRRM3-203ENST00000479294 FAM161AQ3B820 660 aa28.72■■■□□ 2.19
SRRM3-203ENST00000479294 CIAPIN1Q6FI81 312 aa28.72■■■□□ 2.19
SRRM3-203ENST00000479294 ZC3H12CQ9C0D7 883 aaKnown RBP28.72■■■□□ 2.19
SRRM3-203ENST00000479294 XDHP47989 1333 aa28.71■■■□□ 2.19
SRRM3-203ENST00000479294 SCNN1DP51172 638 aa28.71■■■□□ 2.19
SRRM3-203ENST00000479294 TNIP1Q15025 636 aa28.71■■■□□ 2.19
SRRM3-203ENST00000479294 EAPPQ56P03 285 aaPredicted RBP28.71■■■□□ 2.19
SRRM3-203ENST00000479294 SMC4Q9NTJ3 1288 aa28.71■■■□□ 2.19
SRRM3-203ENST00000479294 YDJCA8MPS7 323 aa28.7■■■□□ 2.18
SRRM3-203ENST00000479294 RAD17O75943 681 aa28.7■■■□□ 2.18
SRRM3-203ENST00000479294 FOXO4P98177 505 aa28.7■■■□□ 2.18
SRRM3-203ENST00000479294 GPR101Q96P66 508 aaPredicted RBP28.7■■■□□ 2.18
SRRM3-203ENST00000479294 MINPP1Q9UNW1 487 aa28.7■■■□□ 2.18
SRRM3-203ENST00000479294 CEP350Q5VT06 3117 aa28.69■■■□□ 2.18
SRRM3-203ENST00000479294 ATP2B4P23634 1241 aa28.69■■■□□ 2.18
SRRM3-203ENST00000479294 DBNDD1Q9H9R9 158 aa28.69■■■□□ 2.18
SRRM3-203ENST00000479294 SCN4AP35499 1836 aa28.67■■■□□ 2.18
SRRM3-203ENST00000479294 ANKRD18BA2A2Z9 1011 aa28.67■■■□□ 2.18
SRRM3-203ENST00000479294 EPS15P42566 896 aa28.67■■■□□ 2.18
SRRM3-203ENST00000479294 DOK7Q18PE1 504 aa28.67■■■□□ 2.18
SRRM3-203ENST00000479294 MPHOSPH8Q99549 860 aa28.67■■■□□ 2.18
SRRM3-203ENST00000479294 CLEC11AQ9Y240 323 aa28.67■■■□□ 2.18
SRRM3-203ENST00000479294 ECE2O60344 883 aa28.66■■■□□ 2.18
SRRM3-203ENST00000479294 GMPSP49915 693 aaPredicted RBP28.66■■■□□ 2.18
SRRM3-203ENST00000479294 IFIT5Q13325 482 aaKnown RBP28.66■■■□□ 2.18
SRRM3-203ENST00000479294 GPRC5DQ9NZD1 345 aa28.66■■■□□ 2.18
SRRM3-203ENST00000479294 CHMP3Q9Y3E7 222 aa28.66■■■□□ 2.18
SRRM3-203ENST00000479294 G3V3G9 751 aa28.65■■■□□ 2.18
SRRM3-203ENST00000479294 HNRNPUQ00839 825 aaKnown RBP eCLIP28.65■■■□□ 2.18
SRRM3-203ENST00000479294 EPHA10Q5JZY3 1008 aa28.65■■■□□ 2.18
SRRM3-203ENST00000479294 DCAF8Q5TAQ9 597 aa28.65■■■□□ 2.18
SRRM3-203ENST00000479294 LMBR1LQ6UX01 489 aa28.65■■■□□ 2.18
SRRM3-203ENST00000479294 LTBP1Q14766 1721 aa28.63■■■□□ 2.17
SRRM3-203ENST00000479294 NBPF7P0C2Y1 421 aaPredicted RBP28.63■■■□□ 2.17
SRRM3-203ENST00000479294 USP50Q70EL3 339 aaPredicted RBP28.63■■■□□ 2.17
SRRM3-203ENST00000479294 ANKRD2Q9GZV1 360 aa28.63■■■□□ 2.17
SRRM3-203ENST00000479294 ADARB2Q9NS39 739 aaKnown RBP28.63■■■□□ 2.17
SRRM3-203ENST00000479294 UTYO14607 1347 aa28.63■■■□□ 2.17
SRRM3-203ENST00000479294 CCT4P50991 539 aaKnown RBP28.62■■■□□ 2.17
SRRM3-203ENST00000479294 BRPF1P55201 1214 aaPredicted RBP28.62■■■□□ 2.17
SRRM3-203ENST00000479294 CCDC57Q2TAC2 916 aa28.62■■■□□ 2.17
SRRM3-203ENST00000479294 LEMD3Q9Y2U8 911 aa28.62■■■□□ 2.17
SRRM3-203ENST00000479294 PSMD14O00487 310 aa28.61■■■□□ 2.17
SRRM3-203ENST00000479294 HTRA3P83110 453 aa28.61■■■□□ 2.17
SRRM3-203ENST00000479294 SUCLG2Q96I99 432 aa28.61■■■□□ 2.17
SRRM3-203ENST00000479294 NOB1Q9ULX3 412 aaKnown RBP28.61■■■□□ 2.17
SRRM3-203ENST00000479294 RARSP54136 660 aaKnown RBP28.6■■■□□ 2.17
SRRM3-203ENST00000479294 DNAJC5GQ8N7S2 189 aa28.6■■■□□ 2.17
SRRM3-203ENST00000479294 KCNQ5Q9NR82 932 aa28.6■■■□□ 2.17
SRRM3-203ENST00000479294 WTIPA6NIX2 430 aaPredicted RBP28.59■■■□□ 2.17
SRRM3-203ENST00000479294 DPF2Q92785 391 aa28.59■■■□□ 2.17
SRRM3-203ENST00000479294 KAZALD1Q96I82 304 aa28.59■■■□□ 2.17
SRRM3-203ENST00000479294 ZBTB12Q9Y330 459 aaPredicted RBP28.59■■■□□ 2.17
SRRM3-203ENST00000479294 MYH3P11055 1940 aa28.59■■■□□ 2.17
SRRM3-203ENST00000479294 ITGBL1O95965 494 aaPredicted RBP28.58■■■□□ 2.17
SRRM3-203ENST00000479294 CHRNDQ07001 517 aa28.58■■■□□ 2.17
SRRM3-203ENST00000479294 TAF7LQ5H9L4 462 aa28.58■■■□□ 2.17
SRRM3-203ENST00000479294 MAP1SQ66K74 1059 aaPredicted RBP28.58■■■□□ 2.17
SRRM3-203ENST00000479294 CNTROBQ8N137 903 aa28.58■■■□□ 2.17
SRRM3-203ENST00000479294 API5Q9BZZ5 524 aaKnown RBP28.58■■■□□ 2.17
SRRM3-203ENST00000479294 CNOT7Q9UIV1 285 aaKnown RBP28.58■■■□□ 2.17
SRRM3-203ENST00000479294 MED23Q9ULK4 1368 aa28.58■■■□□ 2.17
SRRM3-203ENST00000479294 RPS12P25398 132 aaKnown RBP28.57■■■□□ 2.16
SRRM3-203ENST00000479294 PODNQ7Z5L7 613 aa28.57■■■□□ 2.16
SRRM3-203ENST00000479294 ZNF804BA4D1E1 1349 aa28.57■■■□□ 2.16
SRRM3-203ENST00000479294 PASKQ96RG2 1323 aa28.57■■■□□ 2.16
SRRM3-203ENST00000479294 H7C1D1 291 aa28.56■■■□□ 2.16
SRRM3-203ENST00000479294 USP44Q9H0E7 712 aa28.56■■■□□ 2.16
SRRM3-203ENST00000479294 VIL1P09327 827 aaKnown RBP28.55■■■□□ 2.16
SRRM3-203ENST00000479294 LDHAL6AQ6ZMR3 332 aa28.55■■■□□ 2.16
SRRM3-203ENST00000479294 MICALL2Q8IY33 904 aa28.55■■■□□ 2.16
SRRM3-203ENST00000479294 ZNF594Q96JF6 807 aaPredicted RBP28.55■■■□□ 2.16
SRRM3-203ENST00000479294 KCNJ4P48050 445 aa28.54■■■□□ 2.16
SRRM3-203ENST00000479294 RABL6Q3YEC7 729 aaPredicted RBP28.54■■■□□ 2.16
SRRM3-203ENST00000479294 BICC1Q9H694 974 aaKnown RBP28.54■■■□□ 2.16
SRRM3-203ENST00000479294 KIF16BQ96L93 1317 aa28.53■■■□□ 2.16
SRRM3-203ENST00000479294 KLRG1Q96E93 195 aa28.53■■■□□ 2.16
SRRM3-203ENST00000479294 CNNM1Q9NRU3 951 aa28.53■■■□□ 2.16
SRRM3-203ENST00000479294 ADAMTSL1Q8N6G6 1762 aa28.52■■■□□ 2.16
SRRM3-203ENST00000479294 ARHGAP45Q92619 1136 aa28.52■■■□□ 2.16
SRRM3-203ENST00000479294 COA1Q9GZY4 146 aa28.52■■■□□ 2.16
SRRM3-203ENST00000479294 CREBZFQ9NS37 354 aa28.52■■■□□ 2.16
SRRM3-203ENST00000479294 SHTN1A0MZ66 631 aa28.51■■■□□ 2.15
SRRM3-203ENST00000479294 TXNRD3Q86VQ6 643 aa28.51■■■□□ 2.15
SRRM3-203ENST00000479294 ANKRD44Q8N8A2 993 aa28.51■■■□□ 2.15
SRRM3-203ENST00000479294 HELBQ8NG08 1087 aaPredicted RBP28.51■■■□□ 2.15
SRRM3-203ENST00000479294 USP17L3A6NCW0 530 aa28.5■■■□□ 2.15
SRRM3-203ENST00000479294 USP17L4A6NCW7 530 aa28.5■■■□□ 2.15
SRRM3-203ENST00000479294 TAF5LO75529 589 aa28.5■■■□□ 2.15
SRRM3-203ENST00000479294 HIRAP54198 1017 aaPredicted RBP28.5■■■□□ 2.15
SRRM3-203ENST00000479294 RSBN1LQ6PCB5 846 aaPredicted RBP28.5■■■□□ 2.15
SRRM3-203ENST00000479294 USP17L1Q7RTZ2 530 aa28.5■■■□□ 2.15
SRRM3-203ENST00000479294 TRPM4Q8TD43 1214 aa28.5■■■□□ 2.15
SRRM3-203ENST00000479294 ZC3H15Q8WU90 426 aaKnown RBP28.5■■■□□ 2.15
SRRM3-203ENST00000479294 AGBL3Q8NEM8 1001 aa28.49■■■□□ 2.15
SRRM3-203ENST00000479294 PGAP2Q9UHJ9 254 aa28.49■■■□□ 2.15
SRRM3-203ENST00000479294 ZBED9Q6R2W3 1325 aa28.48■■■□□ 2.15
SRRM3-203ENST00000479294 KLRK1P26718 216 aa28.48■■■□□ 2.15
SRRM3-203ENST00000479294 TMEM88BA6NKF7 163 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms