RNA–Protein interactions for RNA: ENST00000479176.5

FXR1-213, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-213ENST00000479176 SLFN5Q08AF3 891 aa13.55□□□□□ -0.24
FXR1-213ENST00000479176 FLIIQ13045 1269 aa13.55□□□□□ -0.24
FXR1-213ENST00000479176 PI4KAP1Q8N8J0 262 aa13.55□□□□□ -0.24
FXR1-213ENST00000479176 CCDC191Q8NCU4 936 aa13.55□□□□□ -0.24
FXR1-213ENST00000479176 RNF181Q9P0P0 153 aa13.55□□□□□ -0.24
FXR1-213ENST00000479176 MAP3K2Q9Y2U5 619 aa13.55□□□□□ -0.24
FXR1-213ENST00000479176 TAF1P21675 1872 aa13.55□□□□□ -0.24
FXR1-213ENST00000479176 CCDC93Q567U6 631 aa13.54□□□□□ -0.24
FXR1-213ENST00000479176 TRMT2AQ8IZ69 625 aaKnown RBP13.54□□□□□ -0.24
FXR1-213ENST00000479176 FAM89AQ96GI7 184 aa13.54□□□□□ -0.24
FXR1-213ENST00000479176 RBM17Q96I25 401 aaKnown RBP13.54□□□□□ -0.24
FXR1-213ENST00000479176 TAOK3Q9H2K8 898 aa13.54□□□□□ -0.24
FXR1-213ENST00000479176 ZC3H4Q9UPT8 1303 aaKnown RBP13.54□□□□□ -0.24
FXR1-213ENST00000479176 MYH3P11055 1940 aa13.53□□□□□ -0.24
FXR1-213ENST00000479176 IGKV5-2P06315 115 aa13.53□□□□□ -0.24
FXR1-213ENST00000479176 OLFM4Q6UX06 510 aa13.53□□□□□ -0.24
FXR1-213ENST00000479176 PLPP6Q8IY26 295 aa13.53□□□□□ -0.24
FXR1-213ENST00000479176 ZBTB38Q8NAP3 1195 aaPredicted RBP13.53□□□□□ -0.24
FXR1-213ENST00000479176 ZNF428Q96B54 188 aa13.53□□□□□ -0.24
FXR1-213ENST00000479176 CWC25Q9NXE8 425 aaPredicted RBP13.53□□□□□ -0.24
FXR1-213ENST00000479176 ABCC4O15439 1325 aa13.53□□□□□ -0.24
FXR1-213ENST00000479176 PCCAP05165 728 aaPredicted RBP13.52□□□□□ -0.25
FXR1-213ENST00000479176 SF3B3Q15393 1217 aaKnown RBP13.52□□□□□ -0.25
FXR1-213ENST00000479176 CC2D2BQ6DHV5 1058 aa13.52□□□□□ -0.25
FXR1-213ENST00000479176 CDCA7LQ96GN5 454 aa13.52□□□□□ -0.25
FXR1-213ENST00000479176 LRRC37AA6NMS7 1700 aa13.52□□□□□ -0.25
FXR1-213ENST00000479176 IRS4O14654 1257 aaPredicted RBP13.51□□□□□ -0.25
FXR1-213ENST00000479176 PPEF1O14829 653 aaPredicted RBP13.51□□□□□ -0.25
FXR1-213ENST00000479176 FKBP4Q02790 459 aaKnown RBP eCLIP13.51□□□□□ -0.25
FXR1-213ENST00000479176 NEXNQ0ZGT2 675 aa13.51□□□□□ -0.25
FXR1-213ENST00000479176 FKBP5Q13451 457 aaPredicted RBP13.51□□□□□ -0.25
FXR1-213ENST00000479176 RTKN2Q8IZC4 609 aa13.51□□□□□ -0.25
FXR1-213ENST00000479176 KCNV2Q8TDN2 545 aa13.51□□□□□ -0.25
FXR1-213ENST00000479176 GPBP1L1Q9HC44 474 aaPredicted RBP13.51□□□□□ -0.25
FXR1-213ENST00000479176 COL4A1P02462 1669 aa13.5□□□□□ -0.25
FXR1-213ENST00000479176 CDHR2Q9BYE9 1310 aa13.5□□□□□ -0.25
FXR1-213ENST00000479176 NEURL1BA8MQ27 555 aa13.5□□□□□ -0.25
FXR1-213ENST00000479176 CAMK2BQ13554 666 aa13.5□□□□□ -0.25
FXR1-213ENST00000479176 RTL5Q5HYW3 569 aaPredicted RBP13.5□□□□□ -0.25
FXR1-213ENST00000479176 DNAAF4Q8WXU2 420 aa13.5□□□□□ -0.25
FXR1-213ENST00000479176 PSMD1Q99460 953 aa13.5□□□□□ -0.25
FXR1-213ENST00000479176 BBOX1O75936 387 aa13.49□□□□□ -0.25
FXR1-213ENST00000479176 HSP90B1P14625 803 aaKnown RBP13.49□□□□□ -0.25
FXR1-213ENST00000479176 GRAPQ13588 217 aa13.49□□□□□ -0.25
FXR1-213ENST00000479176 CWF19L2Q2TBE0 894 aaKnown RBP13.49□□□□□ -0.25
FXR1-213ENST00000479176 GRIPAP1Q4V328 841 aa13.49□□□□□ -0.25
FXR1-213ENST00000479176 DDX46Q7L014 1031 aaKnown RBP13.49□□□□□ -0.25
FXR1-213ENST00000479176 SLC51AQ86UW1 340 aa13.49□□□□□ -0.25
FXR1-213ENST00000479176 SLAIN1Q8ND83 568 aa13.49□□□□□ -0.25
FXR1-213ENST00000479176 GRAPLQ8TC17 118 aaPredicted RBP13.49□□□□□ -0.25
FXR1-213ENST00000479176 ZNF526Q8TF50 670 aaPredicted RBP13.49□□□□□ -0.25
FXR1-213ENST00000479176 ATP6V0A2Q9Y487 856 aa13.49□□□□□ -0.25
FXR1-213ENST00000479176 H7C1W4 665 aa13.48□□□□□ -0.25
FXR1-213ENST00000479176 PDE8AO60658 829 aa13.48□□□□□ -0.25
FXR1-213ENST00000479176 LHX8Q68G74 356 aa13.48□□□□□ -0.25
FXR1-213ENST00000479176 MRPL50Q8N5N7 158 aaKnown RBP13.48□□□□□ -0.25
FXR1-213ENST00000479176 LINS1Q8NG48 757 aa13.48□□□□□ -0.25
FXR1-213ENST00000479176 LTBP1Q14766 1721 aa13.47□□□□□ -0.25
FXR1-213ENST00000479176 GCKRQ14397 625 aa13.47□□□□□ -0.25
FXR1-213ENST00000479176 BEND3Q5T5X7 828 aa13.47□□□□□ -0.25
FXR1-213ENST00000479176 TMC4Q7Z404 712 aa13.47□□□□□ -0.25
FXR1-213ENST00000479176 SP8Q8IXZ3 490 aa13.47□□□□□ -0.25
FXR1-213ENST00000479176 SSH1Q8WYL5 1049 aa13.47□□□□□ -0.25
FXR1-213ENST00000479176 JARID2Q92833 1246 aaPredicted RBP13.47□□□□□ -0.25
FXR1-213ENST00000479176 ZNF277Q9NRM2 450 aaPredicted RBP13.47□□□□□ -0.25
FXR1-213ENST00000479176 WDR90Q96KV7 1748 aa13.47□□□□□ -0.25
FXR1-213ENST00000479176 DUOX1Q9NRD9 1551 aa13.46□□□□□ -0.25
FXR1-213ENST00000479176 KDM2BQ8NHM5 1336 aa13.46□□□□□ -0.25
FXR1-213ENST00000479176 GLTPD2A6NH11 291 aa13.46□□□□□ -0.25
FXR1-213ENST00000479176 F6X3S4 739 aa13.46□□□□□ -0.25
FXR1-213ENST00000479176 CT47B1P0C2W7 299 aaPredicted RBP13.46□□□□□ -0.25
FXR1-213ENST00000479176 IARSP41252 1262 aaKnown RBP13.46□□□□□ -0.25
FXR1-213ENST00000479176 CASP7P55210 303 aa13.46□□□□□ -0.25
FXR1-213ENST00000479176 CELF1Q92879 486 aaKnown RBP13.46□□□□□ -0.25
FXR1-213ENST00000479176 NMRK2Q9NPI5 230 aa13.46□□□□□ -0.25
FXR1-213ENST00000479176 COL4A5P29400 1685 aa13.46□□□□□ -0.26
FXR1-213ENST00000479176 ALDH1L2Q3SY69 923 aa13.45□□□□□ -0.26
FXR1-213ENST00000479176 CCDC152Q4G0S7 254 aa13.45□□□□□ -0.26
FXR1-213ENST00000479176 UBE3BQ7Z3V4 1068 aa13.45□□□□□ -0.26
FXR1-213ENST00000479176 PLA2G12BQ9BX93 195 aa13.45□□□□□ -0.26
FXR1-213ENST00000479176 RTFDC1Q9BY42 306 aaPredicted RBP13.45□□□□□ -0.26
FXR1-213ENST00000479176 RTL9Q8NET4 1388 aa13.45□□□□□ -0.26
FXR1-213ENST00000479176 PTPRCP08575 1304 aa13.44□□□□□ -0.26
FXR1-213ENST00000479176 CTSWP56202 376 aa13.44□□□□□ -0.26
FXR1-213ENST00000479176 C1QTNF8P60827 252 aa13.44□□□□□ -0.26
FXR1-213ENST00000479176 TMX4Q9H1E5 349 aaPredicted RBP13.44□□□□□ -0.26
FXR1-213ENST00000479176 SPEF2Q9C093 1822 aa13.43□□□□□ -0.26
FXR1-213ENST00000479176 ALDH1L1O75891 902 aa13.43□□□□□ -0.26
FXR1-213ENST00000479176 RPS8P62241 208 aaKnown RBP13.43□□□□□ -0.26
FXR1-213ENST00000479176 HNRNPUQ00839 825 aaKnown RBP eCLIP13.43□□□□□ -0.26
FXR1-213ENST00000479176 NBR1Q14596 966 aa13.43□□□□□ -0.26
FXR1-213ENST00000479176 TTLL11Q8NHH1 800 aa13.43□□□□□ -0.26
FXR1-213ENST00000479176 VPS33BQ9H267 617 aa13.43□□□□□ -0.26
FXR1-213ENST00000479176 SEC31BQ9NQW1 1179 aa13.43□□□□□ -0.26
FXR1-213ENST00000479176 SCN4AP35499 1836 aa13.42□□□□□ -0.26
FXR1-213ENST00000479176 FZD9O00144 591 aa13.42□□□□□ -0.26
FXR1-213ENST00000479176 DPP8Q6V1X1 898 aaPredicted RBP13.42□□□□□ -0.26
FXR1-213ENST00000479176 MPNDQ8N594 471 aa13.42□□□□□ -0.26
FXR1-213ENST00000479176 SUPT20HQ8NEM7 779 aa13.42□□□□□ -0.26
FXR1-213ENST00000479176 BCL2L13Q9BXK5 485 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms