RNA–Protein interactions for RNA: ENST00000479136.5

GSDMB-209, Transcript of gasdermin B, humanhuman

TSL 1 (best)

Gene GSDMB, Length 2,209 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-209ENST00000479136 CCNL1Q9UK58 526 aaPredicted RBP13.11□□□□□ -0.31
GSDMB-209ENST00000479136 SSH3Q8TE77 659 aa13.11□□□□□ -0.31
GSDMB-209ENST00000479136 TJP1Q07157 1748 aa13.1□□□□□ -0.31
GSDMB-209ENST00000479136 ARFGEF2Q9Y6D5 1785 aa13.1□□□□□ -0.31
GSDMB-209ENST00000479136 SMARCA5O60264 1052 aaPredicted RBP13.1□□□□□ -0.31
GSDMB-209ENST00000479136 GIGYF2Q6Y7W6 1299 aaKnown RBP13.1□□□□□ -0.31
GSDMB-209ENST00000479136 OTUD6BQ8N6M0 293 aa13.1□□□□□ -0.31
GSDMB-209ENST00000479136 LINC00116Q8NCU8 138 aa13.1□□□□□ -0.31
GSDMB-209ENST00000479136 GPTP24298 496 aa13.09□□□□□ -0.31
GSDMB-209ENST00000479136 EIF5P55010 431 aaKnown RBP13.09□□□□□ -0.31
GSDMB-209ENST00000479136 TERF2Q15554 542 aa13.09□□□□□ -0.31
GSDMB-209ENST00000479136 HLFQ16534 295 aa13.09□□□□□ -0.31
GSDMB-209ENST00000479136 ZBTB9Q96C00 473 aa13.09□□□□□ -0.31
GSDMB-209ENST00000479136 LRRCC1Q9C099 1032 aa13.09□□□□□ -0.31
GSDMB-209ENST00000479136 CALRP27797 417 aaKnown RBP13.09□□□□□ -0.31
GSDMB-209ENST00000479136 POLA2Q14181 598 aa13.09□□□□□ -0.31
GSDMB-209ENST00000479136 RNF217Q8TC41 542 aa13.09□□□□□ -0.31
GSDMB-209ENST00000479136 ANKRD7Q92527 254 aa13.09□□□□□ -0.31
GSDMB-209ENST00000479136 PRDM16Q9HAZ2 1276 aa13.09□□□□□ -0.31
GSDMB-209ENST00000479136 CHMP3Q9Y3E7 222 aa13.09□□□□□ -0.31
GSDMB-209ENST00000479136 NHSQ6T4R5 1651 aa13.09□□□□□ -0.31
GSDMB-209ENST00000479136 ERVV-1B6SEH8 477 aa13.08□□□□□ -0.32
GSDMB-209ENST00000479136 DHX16O60231 1041 aaKnown RBP13.08□□□□□ -0.32
GSDMB-209ENST00000479136 TRIM37O94972 964 aa13.08□□□□□ -0.32
GSDMB-209ENST00000479136 HSP90AB4PQ58FF6 505 aa13.08□□□□□ -0.32
GSDMB-209ENST00000479136 EP400NLQ6ZTU2 488 aa13.08□□□□□ -0.32
GSDMB-209ENST00000479136 NBPF5PQ86XG9 351 aaPredicted RBP13.08□□□□□ -0.32
GSDMB-209ENST00000479136 ISCA1Q9BUE6 129 aa13.08□□□□□ -0.32
GSDMB-209ENST00000479136 MED4Q9NPJ6 270 aa13.08□□□□□ -0.32
GSDMB-209ENST00000479136 CCDC39Q9UFE4 941 aa13.08□□□□□ -0.32
GSDMB-209ENST00000479136 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.07□□□□□ -0.32
GSDMB-209ENST00000479136 H7C1W4 665 aa13.07□□□□□ -0.32
GSDMB-209ENST00000479136 RAB11FIP3O75154 756 aa13.07□□□□□ -0.32
GSDMB-209ENST00000479136 MTX1Q13505 466 aa13.07□□□□□ -0.32
GSDMB-209ENST00000479136 KAZALD1Q96I82 304 aa13.07□□□□□ -0.32
GSDMB-209ENST00000479136 BTAF1O14981 1849 aa13.07□□□□□ -0.32
GSDMB-209ENST00000479136 AFDNP55196 1824 aaKnown RBP13.07□□□□□ -0.32
GSDMB-209ENST00000479136 COL15A1P39059 1388 aa13.07□□□□□ -0.32
GSDMB-209ENST00000479136 SPDYE4A6NLX3 237 aa13.07□□□□□ -0.32
GSDMB-209ENST00000479136 C16orf71Q8IYS4 520 aaPredicted RBP13.07□□□□□ -0.32
GSDMB-209ENST00000479136 NUP188Q5SRE5 1749 aa13.06□□□□□ -0.32
GSDMB-209ENST00000479136 EPHA10Q5JZY3 1008 aa13.06□□□□□ -0.32
GSDMB-209ENST00000479136 CASC1Q6TDU7 716 aa13.06□□□□□ -0.32
GSDMB-209ENST00000479136 CNTNAP4Q9C0A0 1308 aa13.06□□□□□ -0.32
GSDMB-209ENST00000479136 GNPATO15228 680 aa13.05□□□□□ -0.32
GSDMB-209ENST00000479136 TRIM28Q13263 835 aaKnown RBP13.05□□□□□ -0.32
GSDMB-209ENST00000479136 G3BP1Q13283 466 aaKnown RBP eCLIP13.05□□□□□ -0.32
GSDMB-209ENST00000479136 FAM89AQ96GI7 184 aa13.05□□□□□ -0.32
GSDMB-209ENST00000479136 RASSF4Q9H2L5 321 aa13.05□□□□□ -0.32
GSDMB-209ENST00000479136 RSPH14Q9UHP6 348 aa13.05□□□□□ -0.32
GSDMB-209ENST00000479136 PA2G4Q9UQ80 394 aaKnown RBP13.05□□□□□ -0.32
GSDMB-209ENST00000479136 ZNF652Q9Y2D9 606 aa13.05□□□□□ -0.32
GSDMB-209ENST00000479136 KCNA4P22459 653 aa13.05□□□□□ -0.32
GSDMB-209ENST00000479136 CASP7P55210 303 aa13.05□□□□□ -0.32
GSDMB-209ENST00000479136 SYCP1Q15431 976 aa13.05□□□□□ -0.32
GSDMB-209ENST00000479136 LMBR1LQ6UX01 489 aa13.05□□□□□ -0.32
GSDMB-209ENST00000479136 NLRP10Q86W26 655 aa13.05□□□□□ -0.32
GSDMB-209ENST00000479136 ZBTB38Q8NAP3 1195 aaPredicted RBP13.05□□□□□ -0.32
GSDMB-209ENST00000479136 KIF1BPQ96EK5 621 aa13.05□□□□□ -0.32
GSDMB-209ENST00000479136 SIL1Q9H173 461 aa13.05□□□□□ -0.32
GSDMB-209ENST00000479136 IL1RAPL2Q9NP60 686 aa13.05□□□□□ -0.32
GSDMB-209ENST00000479136 TRMT112Q9UI30 125 aaKnown RBP13.05□□□□□ -0.32
GSDMB-209ENST00000479136 FAM177BA6PVY3 158 aa13.04□□□□□ -0.32
GSDMB-209ENST00000479136 RC3H1Q5TC82 1133 aaKnown RBP13.04□□□□□ -0.32
GSDMB-209ENST00000479136 ERC1Q8IUD2 1116 aa13.04□□□□□ -0.32
GSDMB-209ENST00000479136 RHPN1Q8TCX5 695 aa13.04□□□□□ -0.32
GSDMB-209ENST00000479136 AK7Q96M32 723 aa13.04□□□□□ -0.32
GSDMB-209ENST00000479136 RTCBQ9Y3I0 505 aaKnown RBP13.04□□□□□ -0.32
GSDMB-209ENST00000479136 CAMTA2O94983 1202 aa13.04□□□□□ -0.32
GSDMB-209ENST00000479136 PCCAP05165 728 aaPredicted RBP13.04□□□□□ -0.32
GSDMB-209ENST00000479136 PLEKHM2Q8IWE5 1019 aa13.04□□□□□ -0.32
GSDMB-209ENST00000479136 MORC2Q9Y6X9 1032 aaPredicted RBP13.04□□□□□ -0.32
GSDMB-209ENST00000479136 RPS6KA4O75676 772 aa13.03□□□□□ -0.32
GSDMB-209ENST00000479136 OTUD7AQ8TE49 926 aaPredicted RBP13.03□□□□□ -0.32
GSDMB-209ENST00000479136 KIF3CO14782 793 aa13.03□□□□□ -0.32
GSDMB-209ENST00000479136 ZPR1O75312 459 aa13.03□□□□□ -0.32
GSDMB-209ENST00000479136 FOXO4P98177 505 aa13.03□□□□□ -0.32
GSDMB-209ENST00000479136 KIAA2012Q0VF49 1180 aa13.03□□□□□ -0.32
GSDMB-209ENST00000479136 RABL6Q3YEC7 729 aaPredicted RBP13.03□□□□□ -0.32
GSDMB-209ENST00000479136 SMIM5Q71RC9 77 aa13.03□□□□□ -0.32
GSDMB-209ENST00000479136 KLHDC4Q8TBB5 520 aa13.03□□□□□ -0.32
GSDMB-209ENST00000479136 SGSM3Q96HU1 749 aa13.03□□□□□ -0.32
GSDMB-209ENST00000479136 BCL2L12Q9HB09 334 aa13.03□□□□□ -0.32
GSDMB-209ENST00000479136 NIP7Q9Y221 180 aaKnown RBP eCLIP13.03□□□□□ -0.32
GSDMB-209ENST00000479136 BRWD3Q6RI45 1802 aa13.02□□□□□ -0.32
GSDMB-209ENST00000479136 CICQ96RK0 1608 aaPredicted RBP13.02□□□□□ -0.33
GSDMB-209ENST00000479136 SEC24BO95487 1268 aa13.02□□□□□ -0.33
GSDMB-209ENST00000479136 TDO2P48775 406 aa13.02□□□□□ -0.33
GSDMB-209ENST00000479136 POTEAQ6S8J7 498 aa13.02□□□□□ -0.33
GSDMB-209ENST00000479136 ZNF34Q8IZ26 560 aa13.02□□□□□ -0.33
GSDMB-209ENST00000479136 CLASRPQ8N2M8 674 aaKnown RBP13.01□□□□□ -0.33
GSDMB-209ENST00000479136 RGS17Q9UGC6 210 aaPredicted RBP13.01□□□□□ -0.33
GSDMB-209ENST00000479136 ZNF831Q5JPB2 1677 aa13.01□□□□□ -0.33
GSDMB-209ENST00000479136 SBF2Q86WG5 1849 aa13.01□□□□□ -0.33
GSDMB-209ENST00000479136 IRS4O14654 1257 aaPredicted RBP13.01□□□□□ -0.33
GSDMB-209ENST00000479136 APBA3O96018 575 aa13.01□□□□□ -0.33
GSDMB-209ENST00000479136 U2AF2P26368 475 aaKnown RBP eCLIP13.01□□□□□ -0.334e-6■■■□□ 18.9
GSDMB-209ENST00000479136 PARP10Q53GL7 1025 aa13.01□□□□□ -0.33
GSDMB-209ENST00000479136 BMP2KLQ5H9B9 411 aa13.01□□□□□ -0.33
GSDMB-209ENST00000479136 SLC27A3Q5K4L6 730 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms