RNA–Protein interactions for RNA: ENST00000478768.2

SNAP47-208, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 3

Gene SNAP47, Length 870 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-208ENST00000478768 CDCA5Q96FF9 252 aa13.19□□□□□ -0.3
SNAP47-208ENST00000478768 HPS5Q9UPZ3 1129 aa13.19□□□□□ -0.3
SNAP47-208ENST00000478768 PAPPA2Q9BXP8 1791 aa13.19□□□□□ -0.3
SNAP47-208ENST00000478768 PSME4Q14997 1843 aa13.18□□□□□ -0.3
SNAP47-208ENST00000478768 REM2Q8IYK8 340 aaPredicted RBP13.18□□□□□ -0.3
SNAP47-208ENST00000478768 EYA3Q99504 573 aa13.18□□□□□ -0.3
SNAP47-208ENST00000478768 VIL1P09327 827 aaKnown RBP13.17□□□□□ -0.3
SNAP47-208ENST00000478768 SF3B3Q15393 1217 aaKnown RBP13.17□□□□□ -0.3
SNAP47-208ENST00000478768 PKN2Q16513 984 aaKnown RBP13.16□□□□□ -0.3
SNAP47-208ENST00000478768 ANGEL2Q5VTE6 544 aaKnown RBP13.16□□□□□ -0.3
SNAP47-208ENST00000478768 TBC1D16Q8TBP0 767 aa13.16□□□□□ -0.3
SNAP47-208ENST00000478768 FAM89AQ96GI7 184 aa13.16□□□□□ -0.3
SNAP47-208ENST00000478768 PNNQ9H307 717 aaKnown RBP13.16□□□□□ -0.3
SNAP47-208ENST00000478768 HDAC9Q9UKV0 1011 aa13.16□□□□□ -0.3
SNAP47-208ENST00000478768 FKBP1BP68106 108 aa13.15□□□□□ -0.3
SNAP47-208ENST00000478768 SCARF1Q14162 830 aa13.15□□□□□ -0.3
SNAP47-208ENST00000478768 RTL5Q5HYW3 569 aaPredicted RBP13.15□□□□□ -0.3
SNAP47-208ENST00000478768 ZNF296Q8WUU4 475 aaPredicted RBP13.15□□□□□ -0.3
SNAP47-208ENST00000478768 BABAM1Q9NWV8 329 aa13.15□□□□□ -0.3
SNAP47-208ENST00000478768 ZNF609O15014 1411 aa13.14□□□□□ -0.31
SNAP47-208ENST00000478768 ATP5J2-PTCD1G3V325 749 aa13.14□□□□□ -0.31
SNAP47-208ENST00000478768 G3V3G9 751 aa13.14□□□□□ -0.31
SNAP47-208ENST00000478768 TBC1D8O95759 1140 aa13.14□□□□□ -0.31
SNAP47-208ENST00000478768 RIPK4P57078 832 aa13.14□□□□□ -0.31
SNAP47-208ENST00000478768 ZNF280AP59817 542 aaPredicted RBP13.14□□□□□ -0.31
SNAP47-208ENST00000478768 DCAF8Q5TAQ9 597 aa13.14□□□□□ -0.31
SNAP47-208ENST00000478768 PLBD2Q8NHP8 589 aa13.14□□□□□ -0.31
SNAP47-208ENST00000478768 ISCA1Q9BUE6 129 aa13.14□□□□□ -0.31
SNAP47-208ENST00000478768 ZC3H12CQ9C0D7 883 aaKnown RBP13.14□□□□□ -0.31
SNAP47-208ENST00000478768 CHPF2Q9P2E5 772 aa13.14□□□□□ -0.31
SNAP47-208ENST00000478768 UFL1O94874 794 aa13.13□□□□□ -0.31
SNAP47-208ENST00000478768 RPS8P62241 208 aaKnown RBP13.13□□□□□ -0.31
SNAP47-208ENST00000478768 KRT24Q2M2I5 525 aa13.13□□□□□ -0.31
SNAP47-208ENST00000478768 RSBN1LQ6PCB5 846 aaPredicted RBP13.13□□□□□ -0.31
SNAP47-208ENST00000478768 MOB2Q70IA6 237 aa13.13□□□□□ -0.31
SNAP47-208ENST00000478768 AGBL3Q8NEM8 1001 aa13.13□□□□□ -0.31
SNAP47-208ENST00000478768 PODXL2Q9NZ53 605 aa13.13□□□□□ -0.31
SNAP47-208ENST00000478768 PITPNM2Q9BZ72 1349 aa13.13□□□□□ -0.31
SNAP47-208ENST00000478768 IRS4O14654 1257 aaPredicted RBP13.12□□□□□ -0.31
SNAP47-208ENST00000478768 ANKRD13DQ6ZTN6 518 aa13.12□□□□□ -0.31
SNAP47-208ENST00000478768 MYOZ2Q9NPC6 264 aa13.12□□□□□ -0.31
SNAP47-208ENST00000478768 ANKIB1Q9P2G1 1089 aa13.12□□□□□ -0.31
SNAP47-208ENST00000478768 SCAF8Q9UPN6 1271 aaKnown RBP13.12□□□□□ -0.31
SNAP47-208ENST00000478768 UBE2Q2LH0YL09 131 aa13.11□□□□□ -0.31
SNAP47-208ENST00000478768 USP17L8P0C7I0 530 aa13.11□□□□□ -0.31
SNAP47-208ENST00000478768 FBXO46Q6PJ61 603 aaPredicted RBP13.11□□□□□ -0.31
SNAP47-208ENST00000478768 SEC31BQ9NQW1 1179 aa13.11□□□□□ -0.31
SNAP47-208ENST00000478768 GGA1Q9UJY5 639 aa13.11□□□□□ -0.31
SNAP47-208ENST00000478768 GPR25O00155 361 aa13.1□□□□□ -0.31
SNAP47-208ENST00000478768 TMPOP42166 694 aaKnown RBP13.1□□□□□ -0.31
SNAP47-208ENST00000478768 TM4SF4P48230 202 aa13.1□□□□□ -0.31
SNAP47-208ENST00000478768 LMOD3Q0VAK6 560 aa13.1□□□□□ -0.31
SNAP47-208ENST00000478768 NOM1Q5C9Z4 860 aaKnown RBP13.1□□□□□ -0.31
SNAP47-208ENST00000478768 HDGFL1Q5TGJ6 251 aa13.1□□□□□ -0.31
SNAP47-208ENST00000478768 PRAMEF18Q5VWM3 479 aa13.1□□□□□ -0.31
SNAP47-208ENST00000478768 GCC1Q96CN9 775 aa13.1□□□□□ -0.31
SNAP47-208ENST00000478768 GMLQ99445 158 aa13.1□□□□□ -0.31
SNAP47-208ENST00000478768 ZNF646O15015 1829 aaPredicted RBP13.1□□□□□ -0.31
SNAP47-208ENST00000478768 MKRN3Q13064 507 aaKnown RBP13.09□□□□□ -0.31
SNAP47-208ENST00000478768 TTLL12Q14166 644 aaPredicted RBP13.09□□□□□ -0.31
SNAP47-208ENST00000478768 DBF4Q9UBU7 674 aaPredicted RBP13.09□□□□□ -0.31
SNAP47-208ENST00000478768 MKI67P46013 3256 aaKnown RBP13.08□□□□□ -0.31
SNAP47-208ENST00000478768 USP17L3A6NCW0 530 aa13.08□□□□□ -0.32
SNAP47-208ENST00000478768 USP17L4A6NCW7 530 aa13.08□□□□□ -0.32
SNAP47-208ENST00000478768 CHL1O00533 1208 aa13.08□□□□□ -0.32
SNAP47-208ENST00000478768 TRIM28Q13263 835 aaKnown RBP13.08□□□□□ -0.32
SNAP47-208ENST00000478768 NBPF9Q3BBW0 867 aa13.08□□□□□ -0.32
SNAP47-208ENST00000478768 USP17L1Q7RTZ2 530 aa13.08□□□□□ -0.32
SNAP47-208ENST00000478768 SPEF2Q9C093 1822 aa13.08□□□□□ -0.32
SNAP47-208ENST00000478768 FKTNO75072 461 aa13.07□□□□□ -0.32
SNAP47-208ENST00000478768 SREBF2Q12772 1141 aa13.07□□□□□ -0.32
SNAP47-208ENST00000478768 ZBTB38Q8NAP3 1195 aaPredicted RBP13.07□□□□□ -0.32
SNAP47-208ENST00000478768 HYPKQ9NX55 129 aa13.07□□□□□ -0.32
SNAP47-208ENST00000478768 LAS1LQ9Y4W2 734 aaKnown RBP13.07□□□□□ -0.32
SNAP47-208ENST00000478768 XDHP47989 1333 aa13.07□□□□□ -0.32
SNAP47-208ENST00000478768 HTTP42858 3142 aa13.06□□□□□ -0.32
SNAP47-208ENST00000478768 HOXB7P09629 217 aa13.06□□□□□ -0.32
SNAP47-208ENST00000478768 NF2P35240 595 aa13.06□□□□□ -0.32
SNAP47-208ENST00000478768 NEUROD2Q15784 382 aa13.06□□□□□ -0.32
SNAP47-208ENST00000478768 CCDC152Q4G0S7 254 aa13.06□□□□□ -0.32
SNAP47-208ENST00000478768 HABP4Q5JVS0 413 aaKnown RBP13.06□□□□□ -0.32
SNAP47-208ENST00000478768 PODNQ7Z5L7 613 aa13.06□□□□□ -0.32
SNAP47-208ENST00000478768 CFHR5Q9BXR6 569 aa13.06□□□□□ -0.32
SNAP47-208ENST00000478768 R3HDMLQ9H3Y0 253 aa13.06□□□□□ -0.32
SNAP47-208ENST00000478768 RBBP6Q7Z6E9 1792 aaKnown RBP13.06□□□□□ -0.32
SNAP47-208ENST00000478768 WNT10BO00744 389 aa13.05□□□□□ -0.32
SNAP47-208ENST00000478768 HSP90B1P14625 803 aaKnown RBP13.05□□□□□ -0.32
SNAP47-208ENST00000478768 RIC3Q7Z5B4 369 aa13.05□□□□□ -0.32
SNAP47-208ENST00000478768 CCDC85AQ96PX6 553 aaPredicted RBP13.05□□□□□ -0.32
SNAP47-208ENST00000478768 CENPFP49454 3210 aa13.05□□□□□ -0.32
SNAP47-208ENST00000478768 LAMB1P07942 1786 aa13.04□□□□□ -0.32
SNAP47-208ENST00000478768 MYH3P11055 1940 aa13.04□□□□□ -0.32
SNAP47-208ENST00000478768 PDE8AO60658 829 aa13.04□□□□□ -0.32
SNAP47-208ENST00000478768 ATP2B4P23634 1241 aa13.04□□□□□ -0.32
SNAP47-208ENST00000478768 PTPN12Q05209 780 aaKnown RBP13.04□□□□□ -0.32
SNAP47-208ENST00000478768 PRKG1Q13976 671 aa13.04□□□□□ -0.32
SNAP47-208ENST00000478768 ANKRD18AQ8IVF6 992 aa13.04□□□□□ -0.32
SNAP47-208ENST00000478768 OGFOD1Q8N543 542 aa13.04□□□□□ -0.32
SNAP47-208ENST00000478768 MXD3Q9BW11 206 aa13.04□□□□□ -0.32
SNAP47-208ENST00000478768 POTEFA5A3E0 1075 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms