RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 POTEIP0CG38 1075 aa28.75■■■□□ 2.19
TRAF4-211ENST00000478021 POTEJP0CG39 1038 aa28.75■■■□□ 2.19
TRAF4-211ENST00000478021 RARSP54136 660 aaKnown RBP28.75■■■□□ 2.19
TRAF4-211ENST00000478021 SMC1BQ8NDV3 1235 aa28.75■■■□□ 2.19
TRAF4-211ENST00000478021 DBNDD1Q9H9R9 158 aa28.75■■■□□ 2.19
TRAF4-211ENST00000478021 HACL1Q9UJ83 578 aa28.75■■■□□ 2.19
TRAF4-211ENST00000478021 XDHP47989 1333 aa28.74■■■□□ 2.19
TRAF4-211ENST00000478021 NBPF7P0C2Y1 421 aaPredicted RBP28.74■■■□□ 2.19
TRAF4-211ENST00000478021 CXCL9Q07325 125 aa28.74■■■□□ 2.19
TRAF4-211ENST00000478021 FSTL1Q12841 308 aa28.74■■■□□ 2.19
TRAF4-211ENST00000478021 LMBR1LQ6UX01 489 aa28.74■■■□□ 2.19
TRAF4-211ENST00000478021 SUCLG2Q96I99 432 aa28.74■■■□□ 2.19
TRAF4-211ENST00000478021 TAF1DQ9H5J8 278 aaPredicted RBP28.74■■■□□ 2.19
TRAF4-211ENST00000478021 MINPP1Q9UNW1 487 aa28.74■■■□□ 2.19
TRAF4-211ENST00000478021 CEP350Q5VT06 3117 aa28.74■■■□□ 2.19
TRAF4-211ENST00000478021 ANKRD18BA2A2Z9 1011 aa28.73■■■□□ 2.19
TRAF4-211ENST00000478021 YDJCA8MPS7 323 aa28.73■■■□□ 2.19
TRAF4-211ENST00000478021 RAD17O75943 681 aa28.73■■■□□ 2.19
TRAF4-211ENST00000478021 DOK7Q18PE1 504 aa28.73■■■□□ 2.19
TRAF4-211ENST00000478021 EPHX2P34913 555 aa28.71■■■□□ 2.19
TRAF4-211ENST00000478021 IFIT5Q13325 482 aaKnown RBP28.71■■■□□ 2.19
TRAF4-211ENST00000478021 EAPPQ56P03 285 aaPredicted RBP28.71■■■□□ 2.19
TRAF4-211ENST00000478021 CIAPIN1Q6FI81 312 aa28.71■■■□□ 2.19
TRAF4-211ENST00000478021 MPHOSPH8Q99549 860 aa28.71■■■□□ 2.19
TRAF4-211ENST00000478021 ZC3H12CQ9C0D7 883 aaKnown RBP28.71■■■□□ 2.19
TRAF4-211ENST00000478021 WTIPA6NIX2 430 aaPredicted RBP28.7■■■□□ 2.18
TRAF4-211ENST00000478021 ECE2O60344 883 aa28.7■■■□□ 2.18
TRAF4-211ENST00000478021 SCNN1DP51172 638 aa28.7■■■□□ 2.18
TRAF4-211ENST00000478021 BRPF1P55201 1214 aaPredicted RBP28.7■■■□□ 2.18
TRAF4-211ENST00000478021 UTYO14607 1347 aa28.69■■■□□ 2.18
TRAF4-211ENST00000478021 ZBED9Q6R2W3 1325 aa28.69■■■□□ 2.18
TRAF4-211ENST00000478021 ATP2B4P23634 1241 aa28.69■■■□□ 2.18
TRAF4-211ENST00000478021 LMOD1P29536 600 aaPredicted RBP28.69■■■□□ 2.18
TRAF4-211ENST00000478021 KAZALD1Q96I82 304 aa28.69■■■□□ 2.18
TRAF4-211ENST00000478021 A0A1B0GUL6 1792 aa28.67■■■□□ 2.18
TRAF4-211ENST00000478021 G3V3G9 751 aa28.67■■■□□ 2.18
TRAF4-211ENST00000478021 EPS15P42566 896 aa28.67■■■□□ 2.18
TRAF4-211ENST00000478021 CCT4P50991 539 aaKnown RBP28.67■■■□□ 2.18
TRAF4-211ENST00000478021 TNIP1Q15025 636 aa28.67■■■□□ 2.18
TRAF4-211ENST00000478021 CCDC57Q2TAC2 916 aa28.67■■■□□ 2.18
TRAF4-211ENST00000478021 DCAF8Q5TAQ9 597 aa28.67■■■□□ 2.18
TRAF4-211ENST00000478021 ZNF594Q96JF6 807 aaPredicted RBP28.67■■■□□ 2.18
TRAF4-211ENST00000478021 API5Q9BZZ5 524 aaKnown RBP28.67■■■□□ 2.18
TRAF4-211ENST00000478021 SCN9AQ15858 1988 aa28.67■■■□□ 2.18
TRAF4-211ENST00000478021 KIF16BQ96L93 1317 aa28.67■■■□□ 2.18
TRAF4-211ENST00000478021 ADAMTSL1Q8N6G6 1762 aa28.66■■■□□ 2.18
TRAF4-211ENST00000478021 GMPSP49915 693 aaPredicted RBP28.66■■■□□ 2.18
TRAF4-211ENST00000478021 CHADLQ6NUI6 762 aa28.66■■■□□ 2.18
TRAF4-211ENST00000478021 USP44Q9H0E7 712 aa28.66■■■□□ 2.18
TRAF4-211ENST00000478021 BICC1Q9H694 974 aaKnown RBP28.66■■■□□ 2.18
TRAF4-211ENST00000478021 KCNQ5Q9NR82 932 aa28.66■■■□□ 2.18
TRAF4-211ENST00000478021 BCAR3O75815 825 aa28.65■■■□□ 2.18
TRAF4-211ENST00000478021 CHRNDQ07001 517 aa28.65■■■□□ 2.18
TRAF4-211ENST00000478021 TAF7LQ5H9L4 462 aa28.65■■■□□ 2.18
TRAF4-211ENST00000478021 CLEC11AQ9Y240 323 aa28.65■■■□□ 2.18
TRAF4-211ENST00000478021 PSMD14O00487 310 aa28.64■■■□□ 2.18
TRAF4-211ENST00000478021 LDHDQ86WU2 507 aa28.64■■■□□ 2.18
TRAF4-211ENST00000478021 ANKRD44Q8N8A2 993 aa28.63■■■□□ 2.17
TRAF4-211ENST00000478021 ANKRD2Q9GZV1 360 aa28.63■■■□□ 2.17
TRAF4-211ENST00000478021 GPRC5DQ9NZD1 345 aa28.63■■■□□ 2.17
TRAF4-211ENST00000478021 APLP1P51693 650 aa28.62■■■□□ 2.17
TRAF4-211ENST00000478021 PNMA8AQ86V59 439 aaPredicted RBP28.62■■■□□ 2.17
TRAF4-211ENST00000478021 HELBQ8NG08 1087 aaPredicted RBP28.62■■■□□ 2.17
TRAF4-211ENST00000478021 ZBTB12Q9Y330 459 aaPredicted RBP28.62■■■□□ 2.17
TRAF4-211ENST00000478021 MED23Q9ULK4 1368 aa28.62■■■□□ 2.17
TRAF4-211ENST00000478021 HTRA3P83110 453 aa28.61■■■□□ 2.17
TRAF4-211ENST00000478021 FRAT1Q92837 279 aaPredicted RBP28.61■■■□□ 2.17
TRAF4-211ENST00000478021 LEMD3Q9Y2U8 911 aa28.61■■■□□ 2.17
TRAF4-211ENST00000478021 PSME4Q14997 1843 aa28.6■■■□□ 2.17
TRAF4-211ENST00000478021 SHTN1A0MZ66 631 aa28.6■■■□□ 2.17
TRAF4-211ENST00000478021 TAF5LO75529 589 aa28.6■■■□□ 2.17
TRAF4-211ENST00000478021 RABL6Q3YEC7 729 aaPredicted RBP28.6■■■□□ 2.17
TRAF4-211ENST00000478021 LDHAL6AQ6ZMR3 332 aa28.6■■■□□ 2.17
TRAF4-211ENST00000478021 TNNQ9UQP3 1299 aa28.6■■■□□ 2.17
TRAF4-211ENST00000478021 ZNF804BA4D1E1 1349 aa28.6■■■□□ 2.17
TRAF4-211ENST00000478021 SNAP23O00161 211 aa28.59■■■□□ 2.17
TRAF4-211ENST00000478021 KLRK1P26718 216 aa28.59■■■□□ 2.17
TRAF4-211ENST00000478021 KCNJ4P48050 445 aa28.59■■■□□ 2.17
TRAF4-211ENST00000478021 TXNRD3Q86VQ6 643 aa28.59■■■□□ 2.17
TRAF4-211ENST00000478021 ARHGAP45Q92619 1136 aa28.59■■■□□ 2.17
TRAF4-211ENST00000478021 CNNM1Q9NRU3 951 aa28.59■■■□□ 2.17
TRAF4-211ENST00000478021 PLIN1O60240 522 aa28.57■■■□□ 2.16
TRAF4-211ENST00000478021 PUS3Q9BZE2 481 aaKnown RBP28.57■■■□□ 2.16
TRAF4-211ENST00000478021 ADARB2Q9NS39 739 aaKnown RBP28.57■■■□□ 2.16
TRAF4-211ENST00000478021 CNOT7Q9UIV1 285 aaKnown RBP28.57■■■□□ 2.16
TRAF4-211ENST00000478021 IPO8O15397 1037 aaKnown RBP28.56■■■□□ 2.16
TRAF4-211ENST00000478021 UBTFL1P0CB47 393 aaPredicted RBP28.56■■■□□ 2.16
TRAF4-211ENST00000478021 TRIM27P14373 513 aa28.56■■■□□ 2.16
TRAF4-211ENST00000478021 MAP1SQ66K74 1059 aaPredicted RBP28.56■■■□□ 2.16
TRAF4-211ENST00000478021 USP50Q70EL3 339 aaPredicted RBP28.56■■■□□ 2.16
TRAF4-211ENST00000478021 MICALL2Q8IY33 904 aa28.56■■■□□ 2.16
TRAF4-211ENST00000478021 VIL1P09327 827 aaKnown RBP28.54■■■□□ 2.16
TRAF4-211ENST00000478021 ATF7IPQ6VMQ6 1270 aa28.54■■■□□ 2.16
TRAF4-211ENST00000478021 CLUAP1Q96AJ1 413 aa28.54■■■□□ 2.16
TRAF4-211ENST00000478021 PODNQ7Z5L7 613 aa28.53■■■□□ 2.16
TRAF4-211ENST00000478021 KLHDC4Q8TBB5 520 aa28.53■■■□□ 2.16
TRAF4-211ENST00000478021 TRPM4Q8TD43 1214 aa28.53■■■□□ 2.16
TRAF4-211ENST00000478021 MEIS3Q99687 375 aa28.53■■■□□ 2.16
TRAF4-211ENST00000478021 ZNF646O15015 1829 aaPredicted RBP28.53■■■□□ 2.16
TRAF4-211ENST00000478021 INTS3Q68E01 1043 aaKnown RBP28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 498.1 ms