RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 C8orf86Q6ZUL3 223 aa8.46□□□□□ -1.06
VPS50-214ENST00000477935 ZNF438Q7Z4V0 828 aa8.46□□□□□ -1.06
VPS50-214ENST00000477935 CCDC87Q9NVE4 849 aa8.46□□□□□ -1.06
VPS50-214ENST00000477935 ABI2Q9NYB9 513 aaPredicted RBP8.46□□□□□ -1.06
VPS50-214ENST00000477935 A6NHS1 94 aa8.45□□□□□ -1.06
VPS50-214ENST00000477935 CPB1P15086 417 aa8.45□□□□□ -1.06
VPS50-214ENST00000477935 ARHGAP4P98171 946 aa8.45□□□□□ -1.06
VPS50-214ENST00000477935 PSAPL1Q6NUJ1 521 aa8.45□□□□□ -1.06
VPS50-214ENST00000477935 XKR5Q6UX68 686 aa8.45□□□□□ -1.06
VPS50-214ENST00000477935 ELP3Q9H9T3 547 aa8.45□□□□□ -1.06
VPS50-214ENST00000477935 TMEM63CQ9P1W3 806 aa8.45□□□□□ -1.06
VPS50-214ENST00000477935 PIK3R2O00459 728 aa8.44□□□□□ -1.06
VPS50-214ENST00000477935 HOXD8P13378 290 aaPredicted RBP8.44□□□□□ -1.06
VPS50-214ENST00000477935 USP5P45974 858 aa8.44□□□□□ -1.06
VPS50-214ENST00000477935 TTC39BQ5VTQ0 682 aaPredicted RBP8.44□□□□□ -1.06
VPS50-214ENST00000477935 HFE2Q6ZVN8 426 aa8.44□□□□□ -1.06
VPS50-214ENST00000477935 TTC16Q8NEE8 873 aa8.44□□□□□ -1.06
VPS50-214ENST00000477935 OR13H1Q8NG92 308 aa8.44□□□□□ -1.06
VPS50-214ENST00000477935 NUDT8Q8WV74 236 aa8.44□□□□□ -1.06
VPS50-214ENST00000477935 NSUN5Q96P11 429 aaKnown RBP8.44□□□□□ -1.06
VPS50-214ENST00000477935 JPH1Q9HDC5 661 aaPredicted RBP8.44□□□□□ -1.06
VPS50-214ENST00000477935 PRDM6Q9NQX0 595 aa8.44□□□□□ -1.06
VPS50-214ENST00000477935 ARHGEF11O15085 1522 aa8.44□□□□□ -1.06
VPS50-214ENST00000477935 KIF21AQ7Z4S6 1674 aa8.43□□□□□ -1.06
VPS50-214ENST00000477935 SOWAHDA6NJG2 315 aa8.43□□□□□ -1.06
VPS50-214ENST00000477935 RASSF7Q02833 373 aa8.43□□□□□ -1.06
VPS50-214ENST00000477935 KCNA1Q09470 495 aa8.43□□□□□ -1.06
VPS50-214ENST00000477935 PERM1Q5SV97 790 aa8.43□□□□□ -1.06
VPS50-214ENST00000477935 TRIM11Q96F44 468 aa8.43□□□□□ -1.06
VPS50-214ENST00000477935 LPIN3Q9BQK8 851 aa8.43□□□□□ -1.06
VPS50-214ENST00000477935 LOC102724428A0A0B4J2F2 783 aa8.42□□□□□ -1.06
VPS50-214ENST00000477935 LILRB5O75023 590 aa8.42□□□□□ -1.06
VPS50-214ENST00000477935 RGS9O75916 674 aaPredicted RBP8.42□□□□□ -1.06
VPS50-214ENST00000477935 EIF2AK2P19525 551 aaKnown RBP8.42□□□□□ -1.06
VPS50-214ENST00000477935 SIK1P57059 783 aa8.42□□□□□ -1.06
VPS50-214ENST00000477935 COL9A3Q14050 684 aaPredicted RBP8.42□□□□□ -1.06
VPS50-214ENST00000477935 GJD3Q8N144 294 aa8.42□□□□□ -1.06
VPS50-214ENST00000477935 SUV39H2Q9H5I1 410 aa8.42□□□□□ -1.06
VPS50-214ENST00000477935 FRRS1LQ9P0K9 344 aa8.42□□□□□ -1.06
VPS50-214ENST00000477935 J3QW42 95 aa8.41□□□□□ -1.06
VPS50-214ENST00000477935 CYP2E1P05181 493 aaPredicted RBP8.41□□□□□ -1.06
VPS50-214ENST00000477935 PDIA4P13667 645 aaKnown RBP8.41□□□□□ -1.06
VPS50-214ENST00000477935 NID1P14543 1247 aa8.41□□□□□ -1.06
VPS50-214ENST00000477935 EHHADHQ08426 723 aa8.41□□□□□ -1.06
VPS50-214ENST00000477935 ELMSAN1Q6PJG2 1045 aa8.41□□□□□ -1.06
VPS50-214ENST00000477935 CNTN3Q9P232 1028 aa8.41□□□□□ -1.06
VPS50-214ENST00000477935 BRPF3Q9ULD4 1205 aa8.41□□□□□ -1.06
VPS50-214ENST00000477935 IVNS1ABPQ9Y6Y0 642 aa8.41□□□□□ -1.06
VPS50-214ENST00000477935 GHRHP01286 108 aa8.4□□□□□ -1.06
VPS50-214ENST00000477935 COL8A1P27658 744 aa8.4□□□□□ -1.06
VPS50-214ENST00000477935 AFF1P51825 1210 aaKnown RBP8.4□□□□□ -1.06
VPS50-214ENST00000477935 COL13A1Q5TAT6 717 aaPredicted RBP8.4□□□□□ -1.06
VPS50-214ENST00000477935 SMG9Q9H0W8 520 aaKnown RBP8.4□□□□□ -1.06
VPS50-214ENST00000477935 NOP53Q9NZM5 478 aaKnown RBP8.4□□□□□ -1.06
VPS50-214ENST00000477935 NDUFB5O43674 189 aa8.39□□□□□ -1.07
VPS50-214ENST00000477935 KIF4AO95239 1232 aa8.39□□□□□ -1.07
VPS50-214ENST00000477935 GDF11O95390 407 aa8.39□□□□□ -1.07
VPS50-214ENST00000477935 HYAL2Q12891 473 aa8.39□□□□□ -1.07
VPS50-214ENST00000477935 C1orf127Q8N9H9 656 aa8.39□□□□□ -1.07
VPS50-214ENST00000477935 PLVAPQ9BX97 442 aa8.39□□□□□ -1.07
VPS50-214ENST00000477935 KANSL3Q9P2N6 904 aa8.39□□□□□ -1.07
VPS50-214ENST00000477935 TNFRSF21O75509 655 aa8.38□□□□□ -1.07
VPS50-214ENST00000477935 GRIK5Q16478 980 aa8.38□□□□□ -1.07
VPS50-214ENST00000477935 TMEM151AQ8N4L1 468 aa8.38□□□□□ -1.07
VPS50-214ENST00000477935 TTC9Q92623 222 aa8.38□□□□□ -1.07
VPS50-214ENST00000477935 PLD4Q96BZ4 506 aa8.38□□□□□ -1.07
VPS50-214ENST00000477935 RBSNQ9H1K0 784 aa8.38□□□□□ -1.07
VPS50-214ENST00000477935 CHRDQ9H2X0 955 aa8.38□□□□□ -1.07
VPS50-214ENST00000477935 BIN2Q9UBW5 565 aaPredicted RBP8.38□□□□□ -1.07
VPS50-214ENST00000477935 SMARCA4P51532 1647 aa8.38□□□□□ -1.07
VPS50-214ENST00000477935 CES1P23141 567 aa8.37□□□□□ -1.07
VPS50-214ENST00000477935 SNX29Q8TEQ0 813 aa8.37□□□□□ -1.07
VPS50-214ENST00000477935 DCAF5Q96JK2 942 aa8.37□□□□□ -1.07
VPS50-214ENST00000477935 SPACA7Q96KW9 195 aa8.37□□□□□ -1.07
VPS50-214ENST00000477935 FOXD3Q9UJU5 478 aaPredicted RBP8.37□□□□□ -1.07
VPS50-214ENST00000477935 PATL2C9JE40 543 aaKnown RBP8.36□□□□□ -1.07
VPS50-214ENST00000477935 ALYREFQ86V81 257 aaKnown RBP8.36□□□□□ -1.07
VPS50-214ENST00000477935 NCAPG2Q86XI2 1143 aa8.36□□□□□ -1.07
VPS50-214ENST00000477935 PMEPA1Q969W9 287 aa8.36□□□□□ -1.07
VPS50-214ENST00000477935 CITED4Q96RK1 184 aa8.36□□□□□ -1.07
VPS50-214ENST00000477935 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.36□□□□□ -1.07
VPS50-214ENST00000477935 CEP164Q9UPV0 1460 aa8.36□□□□□ -1.07
VPS50-214ENST00000477935 PEG3Q9GZU2 1588 aa8.35□□□□□ -1.07
VPS50-214ENST00000477935 SPDYE3A6NKU9 549 aa8.35□□□□□ -1.07
VPS50-214ENST00000477935 EREGO14944 169 aa8.35□□□□□ -1.07
VPS50-214ENST00000477935 PHACTR2O75167 634 aa8.35□□□□□ -1.07
VPS50-214ENST00000477935 ATP11AP98196 1134 aa8.35□□□□□ -1.07
VPS50-214ENST00000477935 PDE3BQ13370 1112 aa8.35□□□□□ -1.07
VPS50-214ENST00000477935 CEP120Q8N960 986 aa8.35□□□□□ -1.07
VPS50-214ENST00000477935 FAM129BQ96TA1 746 aa8.35□□□□□ -1.07
VPS50-214ENST00000477935 SALL4Q9UJQ4 1053 aa8.35□□□□□ -1.07
VPS50-214ENST00000477935 TRAPPC3LQ5T215 181 aa8.34□□□□□ -1.07
VPS50-214ENST00000477935 MSL1Q68DK7 614 aa8.34□□□□□ -1.07
VPS50-214ENST00000477935 AEBP1Q8IUX7 1158 aa8.34□□□□□ -1.07
VPS50-214ENST00000477935 RASSF4Q9H2L5 321 aa8.34□□□□□ -1.07
VPS50-214ENST00000477935 FAM229AH3BQW9 127 aa8.33□□□□□ -1.08
VPS50-214ENST00000477935 SPATA31C1P0DKV0 1188 aa8.33□□□□□ -1.08
VPS50-214ENST00000477935 GDF6Q6KF10 455 aaPredicted RBP8.33□□□□□ -1.08
VPS50-214ENST00000477935 DMRTC2Q8IXT2 367 aaPredicted RBP8.33□□□□□ -1.08
VPS50-214ENST00000477935 TMC1Q8TDI8 760 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms