RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 RTL9Q8NET4 1388 aa17.56■□□□□ 0.4
SOX2-OT-208ENST00000477928 PASKQ96RG2 1323 aa17.56■□□□□ 0.4
SOX2-OT-208ENST00000477928 UFL1O94874 794 aa17.56■□□□□ 0.4
SOX2-OT-208ENST00000477928 ITGBL1O95965 494 aaPredicted RBP17.56■□□□□ 0.4
SOX2-OT-208ENST00000477928 EPHA10Q5JZY3 1008 aa17.56■□□□□ 0.4
SOX2-OT-208ENST00000477928 ANKRD18AQ8IVF6 992 aa17.56■□□□□ 0.4
SOX2-OT-208ENST00000477928 MIER1Q8N108 512 aa17.56■□□□□ 0.4
SOX2-OT-208ENST00000477928 ALDH1L2Q3SY69 923 aa17.55■□□□□ 0.4
SOX2-OT-208ENST00000477928 CIAPIN1Q6FI81 312 aa17.55■□□□□ 0.4
SOX2-OT-208ENST00000477928 KLRG1Q96E93 195 aa17.55■□□□□ 0.4
SOX2-OT-208ENST00000477928 GPRC5DQ9NZD1 345 aa17.55■□□□□ 0.4
SOX2-OT-208ENST00000477928 ANKIB1Q9P2G1 1089 aa17.55■□□□□ 0.4
SOX2-OT-208ENST00000477928 MYH3P11055 1940 aa17.55■□□□□ 0.4
SOX2-OT-208ENST00000477928 PSMD14O00487 310 aa17.54■□□□□ 0.4
SOX2-OT-208ENST00000477928 ECE2O60344 883 aa17.54■□□□□ 0.4
SOX2-OT-208ENST00000477928 LMOD1P29536 600 aaPredicted RBP17.54■□□□□ 0.4
SOX2-OT-208ENST00000477928 PLA2G12BQ9BX93 195 aa17.54■□□□□ 0.4
SOX2-OT-208ENST00000477928 PODXL2Q9NZ53 605 aa17.54■□□□□ 0.4
SOX2-OT-208ENST00000477928 PTPRCP08575 1304 aa17.53■□□□□ 0.4
SOX2-OT-208ENST00000477928 SLC4A10Q6U841 1118 aa17.53■□□□□ 0.4
SOX2-OT-208ENST00000477928 MRPL50Q8N5N7 158 aaKnown RBP17.53■□□□□ 0.4
SOX2-OT-208ENST00000477928 TRPM4Q8TD43 1214 aa17.53■□□□□ 0.4
SOX2-OT-208ENST00000477928 SSH1Q8WYL5 1049 aa17.53■□□□□ 0.4
SOX2-OT-208ENST00000477928 MINPP1Q9UNW1 487 aa17.53■□□□□ 0.4
SOX2-OT-208ENST00000477928 SCN4AP35499 1836 aa17.53■□□□□ 0.4
SOX2-OT-208ENST00000477928 SNAP23O00161 211 aa17.52■□□□□ 0.4
SOX2-OT-208ENST00000477928 TRAF5O00463 557 aa17.52■□□□□ 0.4
SOX2-OT-208ENST00000477928 EGFRP00533 1210 aa17.52■□□□□ 0.4
SOX2-OT-208ENST00000477928 ITGA6P23229 1130 aa17.52■□□□□ 0.4
SOX2-OT-208ENST00000477928 KLRK1P26718 216 aa17.52■□□□□ 0.4
SOX2-OT-208ENST00000477928 HIRAP54198 1017 aaPredicted RBP17.52■□□□□ 0.4
SOX2-OT-208ENST00000477928 FOXO4P98177 505 aa17.52■□□□□ 0.4
SOX2-OT-208ENST00000477928 PNMA8AQ86V59 439 aaPredicted RBP17.52■□□□□ 0.4
SOX2-OT-208ENST00000477928 CNTROBQ8N137 903 aa17.52■□□□□ 0.4
SOX2-OT-208ENST00000477928 CDC5LQ99459 802 aaKnown RBP17.52■□□□□ 0.4
SOX2-OT-208ENST00000477928 GGA1Q9UJY5 639 aa17.52■□□□□ 0.4
SOX2-OT-208ENST00000477928 ALDH1L1O75891 902 aa17.51■□□□□ 0.39
SOX2-OT-208ENST00000477928 CSF1RP07333 972 aa17.51■□□□□ 0.39
SOX2-OT-208ENST00000477928 DLK2Q6UY11 383 aa17.51■□□□□ 0.39
SOX2-OT-208ENST00000477928 MKRN1Q9UHC7 482 aaKnown RBP17.51■□□□□ 0.39
SOX2-OT-208ENST00000477928 XDHP47989 1333 aa17.5■□□□□ 0.39
SOX2-OT-208ENST00000477928 BRPF1P55201 1214 aaPredicted RBP17.5■□□□□ 0.39
SOX2-OT-208ENST00000477928 TXNRD3Q86VQ6 643 aa17.5■□□□□ 0.39
SOX2-OT-208ENST00000477928 MICALL2Q8IY33 904 aa17.5■□□□□ 0.39
SOX2-OT-208ENST00000477928 EYA3Q99504 573 aa17.5■□□□□ 0.39
SOX2-OT-208ENST00000477928 BSDC1Q9NW68 430 aaPredicted RBP17.5■□□□□ 0.39
SOX2-OT-208ENST00000477928 TNIP1Q15025 636 aa17.49■□□□□ 0.39
SOX2-OT-208ENST00000477928 SAMD7Q7Z3H4 446 aa17.49■□□□□ 0.39
SOX2-OT-208ENST00000477928 ZNF594Q96JF6 807 aaPredicted RBP17.49■□□□□ 0.39
SOX2-OT-208ENST00000477928 ZC3H12CQ9C0D7 883 aaKnown RBP17.49■□□□□ 0.39
SOX2-OT-208ENST00000477928 CREBZFQ9NS37 354 aa17.49■□□□□ 0.39
SOX2-OT-208ENST00000477928 ADARB2Q9NS39 739 aaKnown RBP17.49■□□□□ 0.39
SOX2-OT-208ENST00000477928 CNOT7Q9UIV1 285 aaKnown RBP17.49■□□□□ 0.39
SOX2-OT-208ENST00000477928 GRM8O00222 908 aa17.48■□□□□ 0.39
SOX2-OT-208ENST00000477928 LMBR1LQ6UX01 489 aa17.48■□□□□ 0.39
SOX2-OT-208ENST00000477928 USP50Q70EL3 339 aaPredicted RBP17.48■□□□□ 0.39
SOX2-OT-208ENST00000477928 JMYQ8N9B5 988 aa17.48■□□□□ 0.39
SOX2-OT-208ENST00000477928 HELBQ8NG08 1087 aaPredicted RBP17.48■□□□□ 0.39
SOX2-OT-208ENST00000477928 KAZALD1Q96I82 304 aa17.48■□□□□ 0.39
SOX2-OT-208ENST00000477928 SUCLG2Q96I99 432 aa17.48■□□□□ 0.39
SOX2-OT-208ENST00000477928 MXD3Q9BW11 206 aa17.48■□□□□ 0.39
SOX2-OT-208ENST00000477928 CHMP3Q9Y3E7 222 aa17.48■□□□□ 0.39
SOX2-OT-208ENST00000477928 NBPF7P0C2Y1 421 aaPredicted RBP17.47■□□□□ 0.39
SOX2-OT-208ENST00000477928 CCT4P50991 539 aaKnown RBP17.47■□□□□ 0.39
SOX2-OT-208ENST00000477928 TBC1D10BQ4KMP7 808 aaPredicted RBP17.47■□□□□ 0.39
SOX2-OT-208ENST00000477928 GLIS2Q9BZE0 524 aaPredicted RBP17.47■□□□□ 0.39
SOX2-OT-208ENST00000477928 SRCIN1Q9C0H9 1055 aa17.47■□□□□ 0.39
SOX2-OT-208ENST00000477928 PCNTO95613 3336 aa17.47■□□□□ 0.39
SOX2-OT-208ENST00000477928 ATP2B4P23634 1241 aa17.46■□□□□ 0.39
SOX2-OT-208ENST00000477928 IGHMBP2P38935 993 aaKnown RBP17.46■□□□□ 0.39
SOX2-OT-208ENST00000477928 SCN9AQ15858 1988 aa17.46■□□□□ 0.39
SOX2-OT-208ENST00000477928 ASTN2O75129 1339 aaPredicted RBP17.46■□□□□ 0.38
SOX2-OT-208ENST00000477928 SPEF2Q9C093 1822 aa17.45■□□□□ 0.38
SOX2-OT-208ENST00000477928 TMEM88BA6NKF7 163 aa17.45■□□□□ 0.38
SOX2-OT-208ENST00000477928 TAF5LO75529 589 aa17.45■□□□□ 0.38
SOX2-OT-208ENST00000477928 CHRNDQ07001 517 aa17.45■□□□□ 0.38
SOX2-OT-208ENST00000477928 RBM26Q5T8P6 1007 aaKnown RBP17.45■□□□□ 0.38
SOX2-OT-208ENST00000477928 C9orf78Q9NZ63 289 aaPredicted RBP17.45■□□□□ 0.38
SOX2-OT-208ENST00000477928 CNTNAP1P78357 1384 aa17.44■□□□□ 0.38
SOX2-OT-208ENST00000477928 ANKRD18BA2A2Z9 1011 aa17.44■□□□□ 0.38
SOX2-OT-208ENST00000477928 G3V3G9 751 aa17.44■□□□□ 0.38
SOX2-OT-208ENST00000477928 VIL1P09327 827 aaKnown RBP17.44■□□□□ 0.38
SOX2-OT-208ENST00000477928 DCAF8Q5TAQ9 597 aa17.44■□□□□ 0.38
SOX2-OT-208ENST00000477928 CST9Q5W186 159 aa17.44■□□□□ 0.38
SOX2-OT-208ENST00000477928 MPHOSPH8Q99549 860 aa17.44■□□□□ 0.38
SOX2-OT-208ENST00000477928 SMC4Q9NTJ3 1288 aa17.44■□□□□ 0.38
SOX2-OT-208ENST00000477928 MED23Q9ULK4 1368 aa17.43■□□□□ 0.38
SOX2-OT-208ENST00000477928 IFIT5Q13325 482 aaKnown RBP17.43■□□□□ 0.38
SOX2-OT-208ENST00000477928 DPF2Q92785 391 aa17.43■□□□□ 0.38
SOX2-OT-208ENST00000477928 PUS3Q9BZE2 481 aaKnown RBP17.43■□□□□ 0.38
SOX2-OT-208ENST00000477928 UTYO14607 1347 aa17.43■□□□□ 0.38
SOX2-OT-208ENST00000477928 IRS2Q9Y4H2 1338 aa17.43■□□□□ 0.38
SOX2-OT-208ENST00000477928 VEGFBP49765 207 aa17.42■□□□□ 0.38
SOX2-OT-208ENST00000477928 HNRNPUQ00839 825 aaKnown RBP eCLIP17.42■□□□□ 0.38
SOX2-OT-208ENST00000477928 ANKRD44Q8N8A2 993 aa17.42■□□□□ 0.38
SOX2-OT-208ENST00000477928 ARHGAP45Q92619 1136 aa17.42■□□□□ 0.38
SOX2-OT-208ENST00000477928 BICC1Q9H694 974 aaKnown RBP17.42■□□□□ 0.38
SOX2-OT-208ENST00000477928 ZNF804BA4D1E1 1349 aa17.42■□□□□ 0.38
SOX2-OT-208ENST00000477928 ZBED9Q6R2W3 1325 aa17.42■□□□□ 0.38
SOX2-OT-208ENST00000477928 H7C1D1 291 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms