RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 API5Q9BZZ5 524 aaKnown RBP12.34□□□□□ -0.43
NIFK-205ENST00000477693 VPS33BQ9H267 617 aa12.34□□□□□ -0.43
NIFK-205ENST00000477693 GREM2Q9H772 168 aa12.34□□□□□ -0.43
NIFK-205ENST00000477693 C9orf78Q9NZ63 289 aaPredicted RBP12.34□□□□□ -0.43
NIFK-205ENST00000477693 TAF1P21675 1872 aa12.34□□□□□ -0.43
NIFK-205ENST00000477693 GLTPD2A6NH11 291 aa12.33□□□□□ -0.44
NIFK-205ENST00000477693 FOXO4P98177 505 aa12.33□□□□□ -0.44
NIFK-205ENST00000477693 DPP8Q6V1X1 898 aaPredicted RBP12.33□□□□□ -0.44
NIFK-205ENST00000477693 ANKRD18AQ8IVF6 992 aa12.33□□□□□ -0.44
NIFK-205ENST00000477693 SUPT20HQ8NEM7 779 aa12.33□□□□□ -0.44
NIFK-205ENST00000477693 CCDC85AQ96PX6 553 aaPredicted RBP12.33□□□□□ -0.44
NIFK-205ENST00000477693 CDC5LQ99459 802 aaKnown RBP12.33□□□□□ -0.44
NIFK-205ENST00000477693 DUOX1Q9NRD9 1551 aa12.33□□□□□ -0.44
NIFK-205ENST00000477693 CCDC88AQ3V6T2 1871 aa12.33□□□□□ -0.44
NIFK-205ENST00000477693 LTBP1Q14766 1721 aa12.32□□□□□ -0.44
NIFK-205ENST00000477693 C19orf67A6NJJ6 358 aa12.32□□□□□ -0.44
NIFK-205ENST00000477693 ITGA6P23229 1130 aa12.32□□□□□ -0.44
NIFK-205ENST00000477693 CCT4P50991 539 aaKnown RBP12.32□□□□□ -0.44
NIFK-205ENST00000477693 ZKSCAN2Q63HK3 967 aa12.32□□□□□ -0.44
NIFK-205ENST00000477693 MPNDQ8N594 471 aa12.32□□□□□ -0.44
NIFK-205ENST00000477693 CHMP4BQ9H444 224 aaKnown RBP12.32□□□□□ -0.44
NIFK-205ENST00000477693 PODXL2Q9NZ53 605 aa12.32□□□□□ -0.44
NIFK-205ENST00000477693 FARP1Q9Y4F1 1045 aaPredicted RBP12.32□□□□□ -0.44
NIFK-205ENST00000477693 KDM2BQ8NHM5 1336 aa12.32□□□□□ -0.44
NIFK-205ENST00000477693 FZD9O00144 591 aa12.31□□□□□ -0.44
NIFK-205ENST00000477693 BCAR3O75815 825 aa12.31□□□□□ -0.44
NIFK-205ENST00000477693 NBPF7P0C2Y1 421 aaPredicted RBP12.31□□□□□ -0.44
NIFK-205ENST00000477693 FAM161AQ3B820 660 aa12.31□□□□□ -0.44
NIFK-205ENST00000477693 USP44Q9H0E7 712 aa12.31□□□□□ -0.44
NIFK-205ENST00000477693 BSDC1Q9NW68 430 aaPredicted RBP12.31□□□□□ -0.44
NIFK-205ENST00000477693 COL4A5P29400 1685 aa12.31□□□□□ -0.44
NIFK-205ENST00000477693 HAX1O00165 279 aa12.3□□□□□ -0.44
NIFK-205ENST00000477693 PPIP5K2O43314 1243 aa12.3□□□□□ -0.44
NIFK-205ENST00000477693 TRIM27P14373 513 aa12.3□□□□□ -0.44
NIFK-205ENST00000477693 MNX1P50219 401 aaPredicted RBP12.3□□□□□ -0.44
NIFK-205ENST00000477693 KIAA2012Q0VF49 1180 aa12.3□□□□□ -0.44
NIFK-205ENST00000477693 EPHA10Q5JZY3 1008 aa12.3□□□□□ -0.44
NIFK-205ENST00000477693 DPY19L2Q6NUT2 758 aa12.3□□□□□ -0.44
NIFK-205ENST00000477693 ATF7IPQ6VMQ6 1270 aa12.3□□□□□ -0.44
NIFK-205ENST00000477693 LARGE2Q8N3Y3 721 aa12.3□□□□□ -0.44
NIFK-205ENST00000477693 JDP2Q8WYK2 163 aa12.3□□□□□ -0.44
NIFK-205ENST00000477693 KAZALD1Q96I82 304 aa12.3□□□□□ -0.44
NIFK-205ENST00000477693 SUCLG2Q96I99 432 aa12.3□□□□□ -0.44
NIFK-205ENST00000477693 NSFL1CQ9UNZ2 370 aaKnown RBP12.3□□□□□ -0.44
NIFK-205ENST00000477693 ANKRD18BA2A2Z9 1011 aa12.29□□□□□ -0.44
NIFK-205ENST00000477693 KIF3CO14782 793 aa12.29□□□□□ -0.44
NIFK-205ENST00000477693 IGHMBP2P38935 993 aaKnown RBP12.29□□□□□ -0.44
NIFK-205ENST00000477693 GPSM2P81274 684 aa12.29□□□□□ -0.44
NIFK-205ENST00000477693 IFIT5Q13325 482 aaKnown RBP12.29□□□□□ -0.44
NIFK-205ENST00000477693 AOC3Q16853 763 aa12.29□□□□□ -0.44
NIFK-205ENST00000477693 RABL6Q3YEC7 729 aaPredicted RBP12.29□□□□□ -0.44
NIFK-205ENST00000477693 INTS3Q68E01 1043 aaKnown RBP12.29□□□□□ -0.44
NIFK-205ENST00000477693 LMBR1LQ6UX01 489 aa12.29□□□□□ -0.44
NIFK-205ENST00000477693 NMRK2Q9NPI5 230 aa12.29□□□□□ -0.44
NIFK-205ENST00000477693 MINPP1Q9UNW1 487 aa12.29□□□□□ -0.44
NIFK-205ENST00000477693 XDHP47989 1333 aa12.29□□□□□ -0.44
NIFK-205ENST00000477693 WDR90Q96KV7 1748 aa12.28□□□□□ -0.44
NIFK-205ENST00000477693 NIM1KQ8IY84 436 aa12.28□□□□□ -0.44
NIFK-205ENST00000477693 TBC1D16Q8TBP0 767 aa12.28□□□□□ -0.44
NIFK-205ENST00000477693 FRAT1Q92837 279 aaPredicted RBP12.28□□□□□ -0.44
NIFK-205ENST00000477693 L3MBTL3Q96JM7 780 aaPredicted RBP12.28□□□□□ -0.44
NIFK-205ENST00000477693 BICC1Q9H694 974 aaKnown RBP12.28□□□□□ -0.44
NIFK-205ENST00000477693 POLLQ9UGP5 575 aa12.28□□□□□ -0.44
NIFK-205ENST00000477693 ZNF541Q9H0D2 1346 aa12.28□□□□□ -0.44
NIFK-205ENST00000477693 C6orf229H3BNL8 230 aa12.27□□□□□ -0.45
NIFK-205ENST00000477693 WASHC4Q2M389 1173 aa12.27□□□□□ -0.45
NIFK-205ENST00000477693 CCDC57Q2TAC2 916 aa12.27□□□□□ -0.45
NIFK-205ENST00000477693 EYA3Q99504 573 aa12.27□□□□□ -0.45
NIFK-205ENST00000477693 MPHOSPH8Q99549 860 aa12.27□□□□□ -0.45
NIFK-205ENST00000477693 ANKIB1Q9P2G1 1089 aa12.27□□□□□ -0.45
NIFK-205ENST00000477693 GGA1Q9UJY5 639 aa12.27□□□□□ -0.45
NIFK-205ENST00000477693 CHMP3Q9Y3E7 222 aa12.27□□□□□ -0.45
NIFK-205ENST00000477693 DDNO94850 711 aaPredicted RBP12.26□□□□□ -0.45
NIFK-205ENST00000477693 UFL1O94874 794 aa12.26□□□□□ -0.45
NIFK-205ENST00000477693 ATP2B4P23634 1241 aa12.26□□□□□ -0.45
NIFK-205ENST00000477693 EIF6P56537 245 aaKnown RBP12.26□□□□□ -0.45
NIFK-205ENST00000477693 FTSJ3Q8IY81 847 aaKnown RBP12.26□□□□□ -0.45
NIFK-205ENST00000477693 DZIP1LQ8IYY4 767 aaKnown RBP12.26□□□□□ -0.45
NIFK-205ENST00000477693 GPC2Q8N158 579 aa12.26□□□□□ -0.45
NIFK-205ENST00000477693 ANKRD44Q8N8A2 993 aa12.26□□□□□ -0.45
NIFK-205ENST00000477693 RRAGCQ9HB90 399 aa12.26□□□□□ -0.45
NIFK-205ENST00000477693 ZNRF3Q9ULT6 936 aa12.26□□□□□ -0.45
NIFK-205ENST00000477693 SPEF2Q9C093 1822 aa12.25□□□□□ -0.45
NIFK-205ENST00000477693 POTECB2RU33 542 aa12.25□□□□□ -0.45
NIFK-205ENST00000477693 UBTFL1P0CB47 393 aaPredicted RBP12.25□□□□□ -0.45
NIFK-205ENST00000477693 VEGFAP15692 232 aaPredicted RBP12.25□□□□□ -0.45
NIFK-205ENST00000477693 DNAJC5GQ8N7S2 189 aa12.25□□□□□ -0.45
NIFK-205ENST00000477693 ANKRD2Q9GZV1 360 aa12.25□□□□□ -0.45
NIFK-205ENST00000477693 HDAC5Q9UQL6 1122 aa12.25□□□□□ -0.45
NIFK-205ENST00000477693 TNNQ9UQP3 1299 aa12.25□□□□□ -0.45
NIFK-205ENST00000477693 TOMM70O94826 608 aa12.24□□□□□ -0.45
NIFK-205ENST00000477693 CHRNDQ07001 517 aa12.24□□□□□ -0.45
NIFK-205ENST00000477693 TAF7LQ5H9L4 462 aa12.24□□□□□ -0.45
NIFK-205ENST00000477693 TNS4Q8IZW8 715 aa12.24□□□□□ -0.45
NIFK-205ENST00000477693 SP7Q8TDD2 431 aaPredicted RBP12.24□□□□□ -0.45
NIFK-205ENST00000477693 CLUAP1Q96AJ1 413 aa12.24□□□□□ -0.45
NIFK-205ENST00000477693 MEIS3Q99687 375 aa12.24□□□□□ -0.45
NIFK-205ENST00000477693 ZC3H12CQ9C0D7 883 aaKnown RBP12.24□□□□□ -0.45
NIFK-205ENST00000477693 MED23Q9ULK4 1368 aa12.24□□□□□ -0.45
NIFK-205ENST00000477693 LEMD3Q9Y2U8 911 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms