RNA–Protein interactions for RNA: ENST00000477692.6

EXOSC1-209, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 480 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-209ENST00000477692 MPNDQ8N594 471 aa16.48■□□□□ 0.23
EXOSC1-209ENST00000477692 PSMD1Q99460 953 aa16.48■□□□□ 0.23
EXOSC1-209ENST00000477692 MINPP1Q9UNW1 487 aa16.48■□□□□ 0.23
EXOSC1-209ENST00000477692 DICER1Q9UPY3 1922 aaKnown RBP16.48■□□□□ 0.23
EXOSC1-209ENST00000477692 SRGAP3O43295 1099 aa16.47■□□□□ 0.23
EXOSC1-209ENST00000477692 PRELPP51888 382 aa16.47■□□□□ 0.23
EXOSC1-209ENST00000477692 PTPN12Q05209 780 aaKnown RBP16.47■□□□□ 0.23
EXOSC1-209ENST00000477692 DPP8Q6V1X1 898 aaPredicted RBP16.47■□□□□ 0.23
EXOSC1-209ENST00000477692 LDHAL6AQ6ZMR3 332 aa16.47■□□□□ 0.23
EXOSC1-209ENST00000477692 KLHDC4Q8TBB5 520 aa16.47■□□□□ 0.23
EXOSC1-209ENST00000477692 RTFDC1Q9BY42 306 aaPredicted RBP16.47■□□□□ 0.23
EXOSC1-209ENST00000477692 PODXL2Q9NZ53 605 aa16.47■□□□□ 0.23
EXOSC1-209ENST00000477692 NSFL1CQ9UNZ2 370 aaKnown RBP16.47■□□□□ 0.23
EXOSC1-209ENST00000477692 PNMA6EA0A0J9YXQ4 647 aa16.46■□□□□ 0.23
EXOSC1-209ENST00000477692 ATP8B2P98198 1209 aa16.46■□□□□ 0.23
EXOSC1-209ENST00000477692 CRBNQ96SW2 442 aa16.46■□□□□ 0.23
EXOSC1-209ENST00000477692 PUS3Q9BZE2 481 aaKnown RBP16.46■□□□□ 0.23
EXOSC1-209ENST00000477692 COPRSQ9NQ92 184 aa16.46■□□□□ 0.23
EXOSC1-209ENST00000477692 CNNM1Q9NRU3 951 aa16.46■□□□□ 0.23
EXOSC1-209ENST00000477692 XDHP47989 1333 aa16.45■□□□□ 0.22
EXOSC1-209ENST00000477692 LMNB1P20700 586 aa16.45■□□□□ 0.22
EXOSC1-209ENST00000477692 CHRNDQ07001 517 aa16.45■□□□□ 0.22
EXOSC1-209ENST00000477692 CEP85Q6P2H3 762 aa16.45■□□□□ 0.22
EXOSC1-209ENST00000477692 SUPT20HQ8NEM7 779 aa16.45■□□□□ 0.22
EXOSC1-209ENST00000477692 ANKRD2Q9GZV1 360 aa16.45■□□□□ 0.22
EXOSC1-209ENST00000477692 ANKIB1Q9P2G1 1089 aa16.45■□□□□ 0.22
EXOSC1-209ENST00000477692 RIPOR2Q9Y4F9 1068 aa16.45■□□□□ 0.22
EXOSC1-209ENST00000477692 EYA2O00167 538 aa16.44■□□□□ 0.22
EXOSC1-209ENST00000477692 POLA2Q14181 598 aa16.44■□□□□ 0.22
EXOSC1-209ENST00000477692 LRRC24Q50LG9 513 aa16.44■□□□□ 0.22
EXOSC1-209ENST00000477692 TBC1D16Q8TBP0 767 aa16.44■□□□□ 0.22
EXOSC1-209ENST00000477692 SSH3Q8TE77 659 aa16.44■□□□□ 0.22
EXOSC1-209ENST00000477692 ZNF277Q9NRM2 450 aaPredicted RBP16.44■□□□□ 0.22
EXOSC1-209ENST00000477692 POLLQ9UGP5 575 aa16.44■□□□□ 0.22
EXOSC1-209ENST00000477692 FBXO3Q9UK99 471 aa16.44■□□□□ 0.22
EXOSC1-209ENST00000477692 TIAM2Q8IVF5 1701 aa16.44■□□□□ 0.22
EXOSC1-209ENST00000477692 ATP2B4P23634 1241 aa16.43■□□□□ 0.22
EXOSC1-209ENST00000477692 IARSP41252 1262 aaKnown RBP16.43■□□□□ 0.22
EXOSC1-209ENST00000477692 C9orf131Q5VYM1 1079 aa16.43■□□□□ 0.22
EXOSC1-209ENST00000477692 RPAP2Q8IXW5 612 aaPredicted RBP16.43■□□□□ 0.22
EXOSC1-209ENST00000477692 VPS33BQ9H267 617 aa16.43■□□□□ 0.22
EXOSC1-209ENST00000477692 GGA1Q9UJY5 639 aa16.43■□□□□ 0.22
EXOSC1-209ENST00000477692 PA2G4Q9UQ80 394 aaKnown RBP16.43■□□□□ 0.22
EXOSC1-209ENST00000477692 MROH5Q6ZUA9 1318 aa16.43■□□□□ 0.22
EXOSC1-209ENST00000477692 C6orf229H3BNL8 230 aa16.42■□□□□ 0.22
EXOSC1-209ENST00000477692 CIAO1O76071 339 aa16.42■□□□□ 0.22
EXOSC1-209ENST00000477692 UFL1O94874 794 aa16.42■□□□□ 0.22
EXOSC1-209ENST00000477692 ATG9AQ7Z3C6 839 aa16.42■□□□□ 0.22
EXOSC1-209ENST00000477692 HELBQ8NG08 1087 aaPredicted RBP16.42■□□□□ 0.22
EXOSC1-209ENST00000477692 RNF181Q9P0P0 153 aa16.42■□□□□ 0.22
EXOSC1-209ENST00000477692 LEMD3Q9Y2U8 911 aa16.42■□□□□ 0.22
EXOSC1-209ENST00000477692 COL4A5P29400 1685 aa16.41■□□□□ 0.22
EXOSC1-209ENST00000477692 TAF5LO75529 589 aa16.41■□□□□ 0.22
EXOSC1-209ENST00000477692 SIL1Q9H173 461 aa16.41■□□□□ 0.22
EXOSC1-209ENST00000477692 ZNF804BA4D1E1 1349 aa16.41■□□□□ 0.22
EXOSC1-209ENST00000477692 WTIPA6NIX2 430 aaPredicted RBP16.4■□□□□ 0.22
EXOSC1-209ENST00000477692 PPIP5K2O43314 1243 aa16.4■□□□□ 0.22
EXOSC1-209ENST00000477692 CENPBP07199 599 aaPredicted RBP16.4■□□□□ 0.22
EXOSC1-209ENST00000477692 IL15P40933 162 aaPredicted RBP16.4■□□□□ 0.22
EXOSC1-209ENST00000477692 KIAA2012Q0VF49 1180 aa16.4■□□□□ 0.22
EXOSC1-209ENST00000477692 METTL24Q5JXM2 366 aa16.4■□□□□ 0.22
EXOSC1-209ENST00000477692 SIRT2Q8IXJ6 389 aa16.4■□□□□ 0.22
EXOSC1-209ENST00000477692 VGLL2Q8N8G2 317 aa16.4■□□□□ 0.22
EXOSC1-209ENST00000477692 GPR101Q96P66 508 aaPredicted RBP16.4■□□□□ 0.22
EXOSC1-209ENST00000477692 EYA3Q99504 573 aa16.4■□□□□ 0.22
EXOSC1-209ENST00000477692 AOC3Q16853 763 aa16.39■□□□□ 0.21
EXOSC1-209ENST00000477692 WASHC4Q2M389 1173 aa16.39■□□□□ 0.21
EXOSC1-209ENST00000477692 LARGE2Q8N3Y3 721 aa16.39■□□□□ 0.21
EXOSC1-209ENST00000477692 EXOC6Q8TAG9 804 aa16.39■□□□□ 0.21
EXOSC1-209ENST00000477692 MED23Q9ULK4 1368 aa16.38■□□□□ 0.21
EXOSC1-209ENST00000477692 SNAP23O00161 211 aa16.38■□□□□ 0.21
EXOSC1-209ENST00000477692 RIMBP2O15034 1052 aa16.38■□□□□ 0.21
EXOSC1-209ENST00000477692 HMMRO75330 724 aa16.38■□□□□ 0.21
EXOSC1-209ENST00000477692 PDE8BO95263 885 aa16.38■□□□□ 0.21
EXOSC1-209ENST00000477692 KCNJ4P48050 445 aa16.38■□□□□ 0.21
EXOSC1-209ENST00000477692 AAMPQ13685 434 aa16.38■□□□□ 0.21
EXOSC1-209ENST00000477692 ZC3H12CQ9C0D7 883 aaKnown RBP16.38■□□□□ 0.21
EXOSC1-209ENST00000477692 NOP58Q9Y2X3 529 aaKnown RBP16.38■□□□□ 0.21
EXOSC1-209ENST00000477692 ZC3H4Q9UPT8 1303 aaKnown RBP16.38■□□□□ 0.21
EXOSC1-209ENST00000477692 IRS2Q9Y4H2 1338 aa16.38■□□□□ 0.21
EXOSC1-209ENST00000477692 SURF6O75683 361 aaKnown RBP16.37■□□□□ 0.21
EXOSC1-209ENST00000477692 IRX6P78412 446 aaPredicted RBP16.37■□□□□ 0.21
EXOSC1-209ENST00000477692 G3BP1Q13283 466 aaKnown RBP eCLIP16.37■□□□□ 0.21
EXOSC1-209ENST00000477692 UBE4AQ14139 1066 aa16.37■□□□□ 0.21
EXOSC1-209ENST00000477692 PCDHB15Q9Y5E8 787 aa16.37■□□□□ 0.21
EXOSC1-209ENST00000477692 KLRK1P26718 216 aa16.36■□□□□ 0.21
EXOSC1-209ENST00000477692 C15orf52Q6ZUT6 534 aaKnown RBP16.36■□□□□ 0.21
EXOSC1-209ENST00000477692 TXNRD3Q86VQ6 643 aa16.36■□□□□ 0.21
EXOSC1-209ENST00000477692 NIM1KQ8IY84 436 aa16.36■□□□□ 0.21
EXOSC1-209ENST00000477692 JDP2Q8WYK2 163 aa16.36■□□□□ 0.21
EXOSC1-209ENST00000477692 CEP126Q9P2H0 1117 aa16.36■□□□□ 0.21
EXOSC1-209ENST00000477692 FZD9O00144 591 aa16.35■□□□□ 0.21
EXOSC1-209ENST00000477692 SASH1O94885 1247 aa16.35■□□□□ 0.21
EXOSC1-209ENST00000477692 FGFR2P21802 821 aa16.35■□□□□ 0.21
EXOSC1-209ENST00000477692 ARAP2Q8WZ64 1704 aa16.35■□□□□ 0.21
EXOSC1-209ENST00000477692 PSME4Q14997 1843 aa16.34■□□□□ 0.21
EXOSC1-209ENST00000477692 TFCP2Q12800 502 aa16.34■□□□□ 0.21
EXOSC1-209ENST00000477692 PUM3Q15397 648 aaKnown RBP16.34■□□□□ 0.21
EXOSC1-209ENST00000477692 DOK7Q18PE1 504 aa16.34■□□□□ 0.21
EXOSC1-209ENST00000477692 DBNDD1Q9H9R9 158 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms