RNA–Protein interactions for RNA: ENST00000477440.6

ARHGEF3-208, Transcript of Rho guanine nucleotide exchange factor 3, human

TSL 3

Gene ARHGEF3, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF3-208	ENST00000477440	UFL1	O94874	794 aa		31.97	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	TRIM27	P14373	513 aa		31.97	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	IFIT5	Q13325	482 aa	Known RBP	31.97	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	BICC1	Q9H694	974 aa	Known RBP	31.97	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	MINPP1	Q9UNW1	487 aa		31.97	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	SCN4A	P35499	1836 aa		31.97	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	XDH	P47989	1333 aa		31.97	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	WASHC4	Q2M389	1173 aa		31.96	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	GGA1	Q9UJY5	639 aa		31.96	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	RIMBP2	O15034	1052 aa		31.95	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	IPO8	O15397	1037 aa	Known RBP	31.95	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	EIF6	P56537	245 aa	Known RBP	31.95	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	C1QTNF8	P60827	252 aa		31.95	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	ATF7IP	Q6VMQ6	1270 aa		31.95	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	MPHOSPH8	Q99549	860 aa		31.95	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	VEGFA	P15692	232 aa	Predicted RBP	31.94	■■■□□ 2.7
ARHGEF3-208	ENST00000477440	ANKRD44	Q8N8A2	993 aa		31.94	■■■□□ 2.7
ARHGEF3-208	ENST00000477440	EYA3	Q99504	573 aa		31.94	■■■□□ 2.7
ARHGEF3-208	ENST00000477440	CCDC57	Q2TAC2	916 aa		31.93	■■■□□ 2.7
ARHGEF3-208	ENST00000477440	RABL6	Q3YEC7	729 aa	Predicted RBP	31.93	■■■□□ 2.7
ARHGEF3-208	ENST00000477440	L3MBTL3	Q96JM7	780 aa	Predicted RBP	31.93	■■■□□ 2.7
ARHGEF3-208	ENST00000477440	ZNRF3	Q9ULT6	936 aa		31.93	■■■□□ 2.7
ARHGEF3-208	ENST00000477440	INTS3	Q68E01	1043 aa	Known RBP	31.92	■■■□□ 2.7
ARHGEF3-208	ENST00000477440	GPC2	Q8N158	579 aa		31.92	■■■□□ 2.7
ARHGEF3-208	ENST00000477440	ZNF594	Q96JF6	807 aa	Predicted RBP	31.92	■■■□□ 2.7
ARHGEF3-208	ENST00000477440	WTIP	A6NIX2	430 aa	Predicted RBP	31.91	■■■□□ 2.7
ARHGEF3-208	ENST00000477440	CLUAP1	Q96AJ1	413 aa		31.91	■■■□□ 2.7
ARHGEF3-208	ENST00000477440	GJA3	Q9Y6H8	435 aa		31.91	■■■□□ 2.7
ARHGEF3-208	ENST00000477440	SCN9A	Q15858	1988 aa		31.9	■■■□□ 2.7
ARHGEF3-208	ENST00000477440	YDJC	A8MPS7	323 aa		31.9	■■■□□ 2.7
ARHGEF3-208	ENST00000477440	TOMM70	O94826	608 aa		31.9	■■■□□ 2.7
ARHGEF3-208	ENST00000477440	ATP2B4	P23634	1241 aa		31.9	■■■□□ 2.7
ARHGEF3-208	ENST00000477440	ZKSCAN2	Q63HK3	967 aa		31.9	■■■□□ 2.7
ARHGEF3-208	ENST00000477440	C16orf71	Q8IYS4	520 aa	Predicted RBP	31.9	■■■□□ 2.7
ARHGEF3-208	ENST00000477440	DBNDD1	Q9H9R9	158 aa		31.9	■■■□□ 2.7
ARHGEF3-208	ENST00000477440	CXCL9	Q07325	125 aa		31.89	■■■□□ 2.7
ARHGEF3-208	ENST00000477440	TAF7L	Q5H9L4	462 aa		31.89	■■■□□ 2.7
ARHGEF3-208	ENST00000477440	UBTFL1	P0CB47	393 aa	Predicted RBP	31.88	■■■□□ 2.69
ARHGEF3-208	ENST00000477440	CHRND	Q07001	517 aa		31.88	■■■□□ 2.69
ARHGEF3-208	ENST00000477440	DOK7	Q18PE1	504 aa		31.88	■■■□□ 2.69
ARHGEF3-208	ENST00000477440	MEIS3	Q99687	375 aa		31.88	■■■□□ 2.69
ARHGEF3-208	ENST00000477440	ZC3H12C	Q9C0D7	883 aa	Known RBP	31.88	■■■□□ 2.69
ARHGEF3-208	ENST00000477440	PSME4	Q14997	1843 aa		31.86	■■■□□ 2.69
ARHGEF3-208	ENST00000477440	ECE2	O60344	883 aa		31.86	■■■□□ 2.69
ARHGEF3-208	ENST00000477440	RAD17	O75943	681 aa		31.86	■■■□□ 2.69
ARHGEF3-208	ENST00000477440	ANKRD2	Q9GZV1	360 aa		31.86	■■■□□ 2.69
ARHGEF3-208	ENST00000477440	LDHAL6A	Q6ZMR3	332 aa		31.85	■■■□□ 2.69
ARHGEF3-208	ENST00000477440	MED23	Q9ULK4	1368 aa		31.84	■■■□□ 2.69
ARHGEF3-208	ENST00000477440	IQCA1L	A6NCM1	817 aa		31.84	■■■□□ 2.69
ARHGEF3-208	ENST00000477440	CIAPIN1	Q6FI81	312 aa		31.84	■■■□□ 2.69
ARHGEF3-208	ENST00000477440	RBM46	Q8TBY0	533 aa	Known RBP	31.84	■■■□□ 2.69
ARHGEF3-208	ENST00000477440	CNNM1	Q9NRU3	951 aa		31.84	■■■□□ 2.69
ARHGEF3-208	ENST00000477440	LEMD3	Q9Y2U8	911 aa		31.84	■■■□□ 2.69
ARHGEF3-208	ENST00000477440	TMEM57	Q8N5G2	664 aa		31.83	■■■□□ 2.69
ARHGEF3-208	ENST00000477440	HELB	Q8NG08	1087 aa	Predicted RBP	31.83	■■■□□ 2.69
ARHGEF3-208	ENST00000477440	HACL1	Q9UJ83	578 aa		31.83	■■■□□ 2.69
ARHGEF3-208	ENST00000477440	LRRFIP2	Q9Y608	721 aa	Known RBP	31.83	■■■□□ 2.69
ARHGEF3-208	ENST00000477440	ZNF804B	A4D1E1	1349 aa		31.82	■■■□□ 2.68
ARHGEF3-208	ENST00000477440	TAF5L	O75529	589 aa		31.82	■■■□□ 2.68
ARHGEF3-208	ENST00000477440	SCNN1D	P51172	638 aa		31.82	■■■□□ 2.68
ARHGEF3-208	ENST00000477440	PUS3	Q9BZE2	481 aa	Known RBP	31.82	■■■□□ 2.68
ARHGEF3-208	ENST00000477440	TAF1D	Q9H5J8	278 aa	Predicted RBP	31.82	■■■□□ 2.68
ARHGEF3-208	ENST00000477440	KCNQ5	Q9NR82	932 aa		31.81	■■■□□ 2.68
ARHGEF3-208	ENST00000477440	SNAP23	O00161	211 aa		31.8	■■■□□ 2.68
ARHGEF3-208	ENST00000477440	KLRK1	P26718	216 aa		31.8	■■■□□ 2.68
ARHGEF3-208	ENST00000477440	KLHDC4	Q8TBB5	520 aa		31.8	■■■□□ 2.68
ARHGEF3-208	ENST00000477440	ZNF646	O15015	1829 aa	Predicted RBP	31.79	■■■□□ 2.68
ARHGEF3-208	ENST00000477440	ADAMTSL1	Q8N6G6	1762 aa		31.79	■■■□□ 2.68
ARHGEF3-208	ENST00000477440		G3V3G9	751 aa		31.79	■■■□□ 2.68
ARHGEF3-208	ENST00000477440	POTEI	P0CG38	1075 aa		31.79	■■■□□ 2.68
ARHGEF3-208	ENST00000477440	POTEJ	P0CG39	1038 aa		31.79	■■■□□ 2.68
ARHGEF3-208	ENST00000477440	TNIP1	Q15025	636 aa		31.79	■■■□□ 2.68
ARHGEF3-208	ENST00000477440	DCAF8	Q5TAQ9	597 aa		31.79	■■■□□ 2.68
ARHGEF3-208	ENST00000477440	TXNRD3	Q86VQ6	643 aa		31.79	■■■□□ 2.68
ARHGEF3-208	ENST00000477440	PSMD14	O00487	310 aa		31.78	■■■□□ 2.68
ARHGEF3-208	ENST00000477440	GNAI3	P08754	354 aa		31.78	■■■□□ 2.68
ARHGEF3-208	ENST00000477440	RLBP1	P12271	317 aa		31.78	■■■□□ 2.68
ARHGEF3-208	ENST00000477440	EPHX2	P34913	555 aa		31.78	■■■□□ 2.68
ARHGEF3-208	ENST00000477440	KCNJ4	P48050	445 aa		31.78	■■■□□ 2.68
ARHGEF3-208	ENST00000477440	FTSJ3	Q8IY81	847 aa	Known RBP	31.78	■■■□□ 2.68
ARHGEF3-208	ENST00000477440	LMOD1	P29536	600 aa	Predicted RBP	31.77	■■■□□ 2.68
ARHGEF3-208	ENST00000477440	RFX5	P48382	616 aa	Predicted RBP	31.77	■■■□□ 2.68
ARHGEF3-208	ENST00000477440	GMPS	P49915	693 aa	Predicted RBP	31.77	■■■□□ 2.68
ARHGEF3-208	ENST00000477440	DZIP1L	Q8IYY4	767 aa	Known RBP	31.77	■■■□□ 2.68
ARHGEF3-208	ENST00000477440	YTHDC1	Q96MU7	727 aa	Known RBP	31.77	■■■□□ 2.68
ARHGEF3-208	ENST00000477440	PLIN1	O60240	522 aa		31.76	■■■□□ 2.67
ARHGEF3-208	ENST00000477440	EPS15	P42566	896 aa		31.76	■■■□□ 2.67
ARHGEF3-208	ENST00000477440	LRRC24	Q50LG9	513 aa		31.76	■■■□□ 2.67
ARHGEF3-208	ENST00000477440	RCAN3	Q9UKA8	241 aa		31.76	■■■□□ 2.67
ARHGEF3-208	ENST00000477440	HDAC5	Q9UQL6	1122 aa		31.76	■■■□□ 2.67
ARHGEF3-208	ENST00000477440	RIPOR2	Q9Y4F9	1068 aa		31.76	■■■□□ 2.67
ARHGEF3-208	ENST00000477440	SMC1B	Q8NDV3	1235 aa		31.75	■■■□□ 2.67
ARHGEF3-208	ENST00000477440	GPRC5D	Q9NZD1	345 aa		31.75	■■■□□ 2.67
ARHGEF3-208	ENST00000477440	IRS2	Q9Y4H2	1338 aa		31.75	■■■□□ 2.67
ARHGEF3-208	ENST00000477440	FSTL1	Q12841	308 aa		31.74	■■■□□ 2.67
ARHGEF3-208	ENST00000477440	EAPP	Q56P03	285 aa	Predicted RBP	31.74	■■■□□ 2.67
ARHGEF3-208	ENST00000477440	ZBTB12	Q9Y330	459 aa	Predicted RBP	31.74	■■■□□ 2.67
ARHGEF3-208	ENST00000477440	PTPN12	Q05209	780 aa	Known RBP	31.72	■■■□□ 2.67
ARHGEF3-208	ENST00000477440	PODN	Q7Z5L7	613 aa		31.72	■■■□□ 2.67
ARHGEF3-208	ENST00000477440	MROH5	Q6ZUA9	1318 aa		31.72	■■■□□ 2.67

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms