RNA–Protein interactions for RNA: ENST00000477306.1

HDGF-207, Transcript of heparin binding growth factor, humanhuman

TSL 2

Gene HDGF, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-207ENST00000477306 MBIPQ9NS73 344 aa18.78■□□□□ 0.6
HDGF-207ENST00000477306 RTL9Q8NET4 1388 aa18.78■□□□□ 0.6
HDGF-207ENST00000477306 RPS12P25398 132 aaKnown RBP18.77■□□□□ 0.6
HDGF-207ENST00000477306 RPS8P62241 208 aaKnown RBP18.77■□□□□ 0.6
HDGF-207ENST00000477306 TRIM28Q13263 835 aaKnown RBP18.77■□□□□ 0.6
HDGF-207ENST00000477306 RIC3Q7Z5B4 369 aa18.77■□□□□ 0.6
HDGF-207ENST00000477306 TBC1D16Q8TBP0 767 aa18.77■□□□□ 0.6
HDGF-207ENST00000477306 CHMP4AQ9BY43 222 aa18.77■□□□□ 0.6
HDGF-207ENST00000477306 APAF1O14727 1248 aa18.76■□□□□ 0.59
HDGF-207ENST00000477306 GOLGA2Q08379 1002 aa18.76■□□□□ 0.59
HDGF-207ENST00000477306 NOGQ13253 232 aa18.76■□□□□ 0.59
HDGF-207ENST00000477306 DCPSQ96C86 337 aaKnown RBP18.76■□□□□ 0.59
HDGF-207ENST00000477306 PHAXQ9H814 394 aaKnown RBP18.76■□□□□ 0.59
HDGF-207ENST00000477306 SEC31BQ9NQW1 1179 aa18.76■□□□□ 0.59
HDGF-207ENST00000477306 ADM5C9JUS6 153 aa18.75■□□□□ 0.59
HDGF-207ENST00000477306 ZBTB38Q8NAP3 1195 aaPredicted RBP18.75■□□□□ 0.59
HDGF-207ENST00000477306 MCOLN1Q9GZU1 580 aa18.75■□□□□ 0.59
HDGF-207ENST00000477306 GBA2Q9HCG7 927 aaPredicted RBP18.75■□□□□ 0.59
HDGF-207ENST00000477306 CASP8AP2Q9UKL3 1982 aa18.74■□□□□ 0.59
HDGF-207ENST00000477306 ELL2O00472 640 aaPredicted RBP18.74■□□□□ 0.59
HDGF-207ENST00000477306 KIF4BQ2VIQ3 1234 aa18.74■□□□□ 0.59
HDGF-207ENST00000477306 MYD88Q99836 296 aa18.74■□□□□ 0.59
HDGF-207ENST00000477306 ZC3H12CQ9C0D7 883 aaKnown RBP18.74■□□□□ 0.59
HDGF-207ENST00000477306 ANKIB1Q9P2G1 1089 aa18.74■□□□□ 0.59
HDGF-207ENST00000477306 G3V3G9 751 aa18.73■□□□□ 0.59
HDGF-207ENST00000477306 UFL1O94874 794 aa18.73■□□□□ 0.59
HDGF-207ENST00000477306 DCAF8Q5TAQ9 597 aa18.73■□□□□ 0.59
HDGF-207ENST00000477306 RGMBQ6NW40 437 aa18.73■□□□□ 0.59
HDGF-207ENST00000477306 C2orf69Q8N8R5 385 aa18.73■□□□□ 0.59
HDGF-207ENST00000477306 PODXL2Q9NZ53 605 aa18.73■□□□□ 0.59
HDGF-207ENST00000477306 POLR2AP24928 1970 aaKnown RBP18.73■□□□□ 0.59
HDGF-207ENST00000477306 SCN9AQ15858 1988 aa18.73■□□□□ 0.59
HDGF-207ENST00000477306 VIL1P09327 827 aaKnown RBP18.72■□□□□ 0.59
HDGF-207ENST00000477306 ZEB1P37275 1124 aaPredicted RBP18.72■□□□□ 0.59
HDGF-207ENST00000477306 DGKZQ13574 1117 aa18.72■□□□□ 0.59
HDGF-207ENST00000477306 JARID2Q92833 1246 aaPredicted RBP18.72■□□□□ 0.59
HDGF-207ENST00000477306 CCDC85AQ96PX6 553 aaPredicted RBP18.72■□□□□ 0.59
HDGF-207ENST00000477306 GGA3Q9NZ52 723 aa18.72■□□□□ 0.59
HDGF-207ENST00000477306 GGA1Q9UJY5 639 aa18.72■□□□□ 0.59
HDGF-207ENST00000477306 FAM155AB1AL88 458 aaPredicted RBP18.71■□□□□ 0.59
HDGF-207ENST00000477306 HSP90B1P14625 803 aaKnown RBP18.71■□□□□ 0.59
HDGF-207ENST00000477306 MLLT1Q03111 559 aaPredicted RBP18.71■□□□□ 0.59
HDGF-207ENST00000477306 CCDC152Q4G0S7 254 aa18.71■□□□□ 0.59
HDGF-207ENST00000477306 ASTN2O75129 1339 aaPredicted RBP18.71■□□□□ 0.59
HDGF-207ENST00000477306 PCCAP05165 728 aaPredicted RBP18.7■□□□□ 0.58
HDGF-207ENST00000477306 ZNF157P51786 506 aaPredicted RBP18.7■□□□□ 0.58
HDGF-207ENST00000477306 CCDC27Q2M243 656 aa18.7■□□□□ 0.58
HDGF-207ENST00000477306 NCBP3Q53F19 620 aaKnown RBP18.7■□□□□ 0.58
HDGF-207ENST00000477306 SULF1Q8IWU6 871 aa18.7■□□□□ 0.58
HDGF-207ENST00000477306 CCDC191Q8NCU4 936 aa18.7■□□□□ 0.58
HDGF-207ENST00000477306 PDE8AO60658 829 aa18.69■□□□□ 0.58
HDGF-207ENST00000477306 RGS19P49795 217 aa18.69■□□□□ 0.58
HDGF-207ENST00000477306 KIF23Q02241 960 aaPredicted RBP18.69■□□□□ 0.58
HDGF-207ENST00000477306 CCDC102AQ96A19 550 aa18.69■□□□□ 0.58
HDGF-207ENST00000477306 CWC25Q9NXE8 425 aaPredicted RBP18.69■□□□□ 0.58
HDGF-207ENST00000477306 RSBN1LQ6PCB5 846 aaPredicted RBP18.68■□□□□ 0.58
HDGF-207ENST00000477306 C8orf58Q8NAV2 365 aa18.68■□□□□ 0.58
HDGF-207ENST00000477306 ANGEL2Q5VTE6 544 aaKnown RBP18.67■□□□□ 0.58
HDGF-207ENST00000477306 CCDC30Q5VVM6 783 aa18.67■□□□□ 0.58
HDGF-207ENST00000477306 ANKRD18AQ8IVF6 992 aa18.67■□□□□ 0.58
HDGF-207ENST00000477306 AGBL3Q8NEM8 1001 aa18.67■□□□□ 0.58
HDGF-207ENST00000477306 CDCA5Q96FF9 252 aa18.67■□□□□ 0.58
HDGF-207ENST00000477306 METTL22Q9BUU2 404 aaPredicted RBP18.67■□□□□ 0.58
HDGF-207ENST00000477306 XDHP47989 1333 aa18.67■□□□□ 0.58
HDGF-207ENST00000477306 DDX58O95786 925 aaKnown RBP18.66■□□□□ 0.58
HDGF-207ENST00000477306 ZNF280AP59817 542 aaPredicted RBP18.66■□□□□ 0.58
HDGF-207ENST00000477306 SCARF1Q14162 830 aa18.66■□□□□ 0.58
HDGF-207ENST00000477306 TRPA1O75762 1119 aa18.65■□□□□ 0.58
HDGF-207ENST00000477306 SLC10A3P09131 477 aa18.65■□□□□ 0.58
HDGF-207ENST00000477306 RNF186Q9NXI6 227 aa18.65■□□□□ 0.58
HDGF-207ENST00000477306 SAGE1Q9NXZ1 904 aa18.65■□□□□ 0.58
HDGF-207ENST00000477306 MAP3K2Q9Y2U5 619 aa18.65■□□□□ 0.58
HDGF-207ENST00000477306 ZNF609O15014 1411 aa18.65■□□□□ 0.58
HDGF-207ENST00000477306 USP17L8P0C7I0 530 aa18.64■□□□□ 0.57
HDGF-207ENST00000477306 ATP2B4P23634 1241 aa18.64■□□□□ 0.57
HDGF-207ENST00000477306 GMLQ99445 158 aa18.64■□□□□ 0.57
HDGF-207ENST00000477306 PSME4Q14997 1843 aa18.64■□□□□ 0.57
HDGF-207ENST00000477306 IL16Q14005 1332 aa18.64■□□□□ 0.57
HDGF-207ENST00000477306 USP17L3A6NCW0 530 aa18.63■□□□□ 0.57
HDGF-207ENST00000477306 USP17L4A6NCW7 530 aa18.63■□□□□ 0.57
HDGF-207ENST00000477306 WTIPA6NIX2 430 aaPredicted RBP18.63■□□□□ 0.57
HDGF-207ENST00000477306 CTSWP56202 376 aa18.63■□□□□ 0.57
HDGF-207ENST00000477306 USP17L1Q7RTZ2 530 aa18.63■□□□□ 0.57
HDGF-207ENST00000477306 TSPYL6Q8N831 410 aa18.63■□□□□ 0.57
HDGF-207ENST00000477306 CSRNP1Q96S65 589 aa18.63■□□□□ 0.57
HDGF-207ENST00000477306 CDC5LQ99459 802 aaKnown RBP18.63■□□□□ 0.57
HDGF-207ENST00000477306 MYOZ2Q9NPC6 264 aa18.63■□□□□ 0.57
HDGF-207ENST00000477306 IGKV5-2P06315 115 aa18.62■□□□□ 0.57
HDGF-207ENST00000477306 PODNQ7Z5L7 613 aa18.62■□□□□ 0.57
HDGF-207ENST00000477306 RASAL3Q86YV0 1011 aa18.62■□□□□ 0.57
HDGF-207ENST00000477306 WWC1Q8IX03 1113 aa18.62■□□□□ 0.57
HDGF-207ENST00000477306 SCAF8Q9UPN6 1271 aaKnown RBP18.62■□□□□ 0.57
HDGF-207ENST00000477306 PI4KAP2A4QPH2 592 aa18.61■□□□□ 0.57
HDGF-207ENST00000477306 CCDC184Q52MB2 194 aa18.61■□□□□ 0.57
HDGF-207ENST00000477306 KSR2Q6VAB6 950 aa18.61■□□□□ 0.57
HDGF-207ENST00000477306 PI4KAP1Q8N8J0 262 aa18.61■□□□□ 0.57
HDGF-207ENST00000477306 AKAP11Q9UKA4 1901 aa18.61■□□□□ 0.57
HDGF-207ENST00000477306 SPEF2Q9C093 1822 aa18.6■□□□□ 0.57
HDGF-207ENST00000477306 PITPNM2Q9BZ72 1349 aa18.6■□□□□ 0.57
HDGF-207ENST00000477306 TTLL11Q8NHH1 800 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms