RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 CDCA5Q96FF9 252 aa21.55■■□□□ 1.04
APOBEC3F-203ENST00000476513 COL4A1P02462 1669 aa21.55■■□□□ 1.04
APOBEC3F-203ENST00000476513 TNRC18O15417 2968 aaPredicted RBP21.55■■□□□ 1.04
APOBEC3F-203ENST00000476513 POLR2AP24928 1970 aaKnown RBP21.54■■□□□ 1.04
APOBEC3F-203ENST00000476513 KRT24Q2M2I5 525 aa21.54■■□□□ 1.04
APOBEC3F-203ENST00000476513 PLBD2Q8NHP8 589 aa21.54■■□□□ 1.04
APOBEC3F-203ENST00000476513 ISCA1Q9BUE6 129 aa21.54■■□□□ 1.04
APOBEC3F-203ENST00000476513 CHPF2Q9P2E5 772 aa21.54■■□□□ 1.04
APOBEC3F-203ENST00000476513 DDX60Q8IY21 1712 aaKnown RBP21.53■■□□□ 1.04
APOBEC3F-203ENST00000476513 RASAL3Q86YV0 1011 aa21.53■■□□□ 1.04
APOBEC3F-203ENST00000476513 ATP5J2-PTCD1G3V325 749 aa21.52■■□□□ 1.04
APOBEC3F-203ENST00000476513 PRPF38BQ5VTL8 546 aaKnown RBP21.52■■□□□ 1.04
APOBEC3F-203ENST00000476513 RPS8P62241 208 aaKnown RBP21.51■■□□□ 1.03
APOBEC3F-203ENST00000476513 RTL5Q5HYW3 569 aaPredicted RBP21.51■■□□□ 1.03
APOBEC3F-203ENST00000476513 ANKRD13DQ6ZTN6 518 aa21.51■■□□□ 1.03
APOBEC3F-203ENST00000476513 REM2Q8IYK8 340 aaPredicted RBP21.51■■□□□ 1.03
APOBEC3F-203ENST00000476513 ZC3H12CQ9C0D7 883 aaKnown RBP21.51■■□□□ 1.03
APOBEC3F-203ENST00000476513 TMPOP42166 694 aaKnown RBP21.5■■□□□ 1.03
APOBEC3F-203ENST00000476513 ZNF280AP59817 542 aaPredicted RBP21.5■■□□□ 1.03
APOBEC3F-203ENST00000476513 LMOD3Q0VAK6 560 aa21.5■■□□□ 1.03
APOBEC3F-203ENST00000476513 SCARF1Q14162 830 aa21.5■■□□□ 1.03
APOBEC3F-203ENST00000476513 ANGEL2Q5VTE6 544 aaKnown RBP21.5■■□□□ 1.03
APOBEC3F-203ENST00000476513 HPS5Q9UPZ3 1129 aa21.5■■□□□ 1.03
APOBEC3F-203ENST00000476513 IRS4O14654 1257 aaPredicted RBP21.49■■□□□ 1.03
APOBEC3F-203ENST00000476513 PODXL2Q9NZ53 605 aa21.49■■□□□ 1.03
APOBEC3F-203ENST00000476513 AKAP11Q9UKA4 1901 aa21.49■■□□□ 1.03
APOBEC3F-203ENST00000476513 G3V3G9 751 aa21.48■■□□□ 1.03
APOBEC3F-203ENST00000476513 CHL1O00533 1208 aa21.48■■□□□ 1.03
APOBEC3F-203ENST00000476513 FKBP1BP68106 108 aa21.48■■□□□ 1.03
APOBEC3F-203ENST00000476513 DCAF8Q5TAQ9 597 aa21.48■■□□□ 1.03
APOBEC3F-203ENST00000476513 SCN9AQ15858 1988 aa21.48■■□□□ 1.03
APOBEC3F-203ENST00000476513 UFL1O94874 794 aa21.47■■□□□ 1.03
APOBEC3F-203ENST00000476513 HDGFL1Q5TGJ6 251 aa21.47■■□□□ 1.03
APOBEC3F-203ENST00000476513 RSBN1LQ6PCB5 846 aaPredicted RBP21.47■■□□□ 1.03
APOBEC3F-203ENST00000476513 AGBL3Q8NEM8 1001 aa21.47■■□□□ 1.03
APOBEC3F-203ENST00000476513 SEC31BQ9NQW1 1179 aa21.47■■□□□ 1.03
APOBEC3F-203ENST00000476513 ZNF609O15014 1411 aa21.46■■□□□ 1.03
APOBEC3F-203ENST00000476513 TRIM28Q13263 835 aaKnown RBP21.46■■□□□ 1.03
APOBEC3F-203ENST00000476513 PKN2Q16513 984 aaKnown RBP21.46■■□□□ 1.03
APOBEC3F-203ENST00000476513 ANKIB1Q9P2G1 1089 aa21.46■■□□□ 1.03
APOBEC3F-203ENST00000476513 GGA1Q9UJY5 639 aa21.46■■□□□ 1.03
APOBEC3F-203ENST00000476513 TBC1D8O95759 1140 aa21.45■■□□□ 1.02
APOBEC3F-203ENST00000476513 MOB2Q70IA6 237 aa21.45■■□□□ 1.02
APOBEC3F-203ENST00000476513 ZNF296Q8WUU4 475 aaPredicted RBP21.45■■□□□ 1.02
APOBEC3F-203ENST00000476513 GMLQ99445 158 aa21.45■■□□□ 1.02
APOBEC3F-203ENST00000476513 DBF4Q9UBU7 674 aaPredicted RBP21.45■■□□□ 1.02
APOBEC3F-203ENST00000476513 HDAC9Q9UKV0 1011 aa21.45■■□□□ 1.02
APOBEC3F-203ENST00000476513 LAS1LQ9Y4W2 734 aaKnown RBP21.45■■□□□ 1.02
APOBEC3F-203ENST00000476513 MYOZ2Q9NPC6 264 aa21.44■■□□□ 1.02
APOBEC3F-203ENST00000476513 PITPNM2Q9BZ72 1349 aa21.44■■□□□ 1.02
APOBEC3F-203ENST00000476513 PAPPA2Q9BXP8 1791 aa21.43■■□□□ 1.02
APOBEC3F-203ENST00000476513 UBE2Q2LH0YL09 131 aa21.43■■□□□ 1.02
APOBEC3F-203ENST00000476513 HOXB7P09629 217 aa21.43■■□□□ 1.02
APOBEC3F-203ENST00000476513 USP17L8P0C7I0 530 aa21.43■■□□□ 1.02
APOBEC3F-203ENST00000476513 NEUROD2Q15784 382 aa21.43■■□□□ 1.02
APOBEC3F-203ENST00000476513 HYPKQ9NX55 129 aa21.43■■□□□ 1.02
APOBEC3F-203ENST00000476513 SCAF8Q9UPN6 1271 aaKnown RBP21.43■■□□□ 1.02
APOBEC3F-203ENST00000476513 ZBTB38Q8NAP3 1195 aaPredicted RBP21.42■■□□□ 1.02
APOBEC3F-203ENST00000476513 PRAMEF18Q5VWM3 479 aa21.41■■□□□ 1.02
APOBEC3F-203ENST00000476513 TRIM35Q9UPQ4 493 aa21.4■■□□□ 1.02
APOBEC3F-203ENST00000476513 USP17L3A6NCW0 530 aa21.39■■□□□ 1.01
APOBEC3F-203ENST00000476513 USP17L4A6NCW7 530 aa21.39■■□□□ 1.01
APOBEC3F-203ENST00000476513 GPR25O00155 361 aa21.39■■□□□ 1.01
APOBEC3F-203ENST00000476513 TM4SF4P48230 202 aa21.39■■□□□ 1.01
APOBEC3F-203ENST00000476513 CCDC152Q4G0S7 254 aa21.39■■□□□ 1.01
APOBEC3F-203ENST00000476513 USP17L1Q7RTZ2 530 aa21.39■■□□□ 1.01
APOBEC3F-203ENST00000476513 CCDC146Q8IYE0 955 aa21.39■■□□□ 1.01
APOBEC3F-203ENST00000476513 XDHP47989 1333 aa21.38■■□□□ 1.01
APOBEC3F-203ENST00000476513 HSP90B1P14625 803 aaKnown RBP21.38■■□□□ 1.01
APOBEC3F-203ENST00000476513 NBPF9Q3BBW0 867 aa21.38■■□□□ 1.01
APOBEC3F-203ENST00000476513 NOM1Q5C9Z4 860 aaKnown RBP21.38■■□□□ 1.01
APOBEC3F-203ENST00000476513 DUSP27Q5VZP5 1158 aa21.38■■□□□ 1.01
APOBEC3F-203ENST00000476513 RIC3Q7Z5B4 369 aa21.38■■□□□ 1.01
APOBEC3F-203ENST00000476513 TTLL12Q14166 644 aaPredicted RBP21.37■■□□□ 1.01
APOBEC3F-203ENST00000476513 FBXO46Q6PJ61 603 aaPredicted RBP21.37■■□□□ 1.01
APOBEC3F-203ENST00000476513 PODNQ7Z5L7 613 aa21.37■■□□□ 1.01
APOBEC3F-203ENST00000476513 CCDC85AQ96PX6 553 aaPredicted RBP21.37■■□□□ 1.01
APOBEC3F-203ENST00000476513 PDE8AO60658 829 aa21.36■■□□□ 1.01
APOBEC3F-203ENST00000476513 PCCAP05165 728 aaPredicted RBP21.36■■□□□ 1.01
APOBEC3F-203ENST00000476513 ATP2B4P23634 1241 aa21.36■■□□□ 1.01
APOBEC3F-203ENST00000476513 GOLGA2Q08379 1002 aa21.36■■□□□ 1.01
APOBEC3F-203ENST00000476513 JARID2Q92833 1246 aaPredicted RBP21.36■■□□□ 1.01
APOBEC3F-203ENST00000476513 WTIPA6NIX2 430 aaPredicted RBP21.35■■□□□ 1.01
APOBEC3F-203ENST00000476513 MKRN3Q13064 507 aaKnown RBP21.35■■□□□ 1.01
APOBEC3F-203ENST00000476513 ANKRD18AQ8IVF6 992 aa21.35■■□□□ 1.01
APOBEC3F-203ENST00000476513 MYD88Q99836 296 aa21.35■■□□□ 1.01
APOBEC3F-203ENST00000476513 PHAXQ9H814 394 aaKnown RBP21.35■■□□□ 1.01
APOBEC3F-203ENST00000476513 PSME4Q14997 1843 aa21.34■■□□□ 1.01
APOBEC3F-203ENST00000476513 CCDC191Q8NCU4 936 aa21.34■■□□□ 1.01
APOBEC3F-203ENST00000476513 MXD3Q9BW11 206 aa21.34■■□□□ 1.01
APOBEC3F-203ENST00000476513 R3HDMLQ9H3Y0 253 aa21.34■■□□□ 1.01
APOBEC3F-203ENST00000476513 WNT10BO00744 389 aa21.33■■□□□ 1.01
APOBEC3F-203ENST00000476513 FKTNO75072 461 aa21.33■■□□□ 1.01
APOBEC3F-203ENST00000476513 NF2P35240 595 aa21.33■■□□□ 1.01
APOBEC3F-203ENST00000476513 CFHR5Q9BXR6 569 aa21.33■■□□□ 1.01
APOBEC3F-203ENST00000476513 PTPN12Q05209 780 aaKnown RBP21.32■■□□□ 1
APOBEC3F-203ENST00000476513 SREBF2Q12772 1141 aa21.32■■□□□ 1
APOBEC3F-203ENST00000476513 RALBP1Q15311 655 aa21.32■■□□□ 1
APOBEC3F-203ENST00000476513 DACT2Q5SW24 774 aa21.32■■□□□ 1
APOBEC3F-203ENST00000476513 RUNDC1Q96C34 613 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms