RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 CCDC112Q8NEF3 446 aa5.86□□□□□ -1.47
CCDC39-204ENST00000476379 GPHNQ9NQX3 736 aaPredicted RBP5.86□□□□□ -1.47
CCDC39-204ENST00000476379 ECHDC1Q9NTX5 307 aa5.86□□□□□ -1.47
CCDC39-204ENST00000476379 PYCARDQ9ULZ3 195 aa5.86□□□□□ -1.47
CCDC39-204ENST00000476379 ATF5Q9Y2D1 282 aaPredicted RBP5.86□□□□□ -1.47
CCDC39-204ENST00000476379 PTCH1Q13635 1447 aa5.86□□□□□ -1.47
CCDC39-204ENST00000476379 TNS3Q68CZ2 1445 aa5.86□□□□□ -1.47
CCDC39-204ENST00000476379 RNMTO43148 476 aaKnown RBP5.86□□□□□ -1.47
CCDC39-204ENST00000476379 F13A1P00488 732 aa5.86□□□□□ -1.47
CCDC39-204ENST00000476379 PHKG2P15735 406 aa5.86□□□□□ -1.47
CCDC39-204ENST00000476379 Q6ZUG5 572 aa5.86□□□□□ -1.47
CCDC39-204ENST00000476379 GJD4Q96KN9 370 aaPredicted RBP5.86□□□□□ -1.47
CCDC39-204ENST00000476379 PNPLA6Q8IY17 1366 aa5.86□□□□□ -1.47
CCDC39-204ENST00000476379 WDR17Q8IZU2 1322 aa5.86□□□□□ -1.47
CCDC39-204ENST00000476379 NALCNQ8IZF0 1738 aa5.86□□□□□ -1.47
CCDC39-204ENST00000476379 SETBP1Q9Y6X0 1596 aa5.86□□□□□ -1.47
CCDC39-204ENST00000476379 VGLL3A8MV65 326 aa5.86□□□□□ -1.47
CCDC39-204ENST00000476379 NRDCO43847 1150 aa5.86□□□□□ -1.47
CCDC39-204ENST00000476379 GLRX3O76003 335 aaKnown RBP5.86□□□□□ -1.47
CCDC39-204ENST00000476379 ZBTB7AO95365 584 aa5.86□□□□□ -1.47
CCDC39-204ENST00000476379 ATP8B2P98198 1209 aa5.86□□□□□ -1.47
CCDC39-204ENST00000476379 ME3Q16798 604 aa5.86□□□□□ -1.47
CCDC39-204ENST00000476379 LMBR1LQ6UX01 489 aa5.86□□□□□ -1.47
CCDC39-204ENST00000476379 FSIP1Q8NA03 581 aa5.86□□□□□ -1.47
CCDC39-204ENST00000476379 A0A0D9SFI3 127 aa5.86□□□□□ -1.47
CCDC39-204ENST00000476379 GNPATO15228 680 aa5.86□□□□□ -1.47
CCDC39-204ENST00000476379 DHX16O60231 1041 aaKnown RBP5.86□□□□□ -1.47
CCDC39-204ENST00000476379 TFCP2Q12800 502 aa5.86□□□□□ -1.47
CCDC39-204ENST00000476379 ENOX2Q16206 610 aaKnown RBP5.86□□□□□ -1.47
CCDC39-204ENST00000476379 VPS53Q5VIR6 699 aa5.86□□□□□ -1.47
CCDC39-204ENST00000476379 SIRT1Q96EB6 747 aa5.86□□□□□ -1.47
CCDC39-204ENST00000476379 DBNDD2Q9BQY9 259 aa5.86□□□□□ -1.47
CCDC39-204ENST00000476379 CNNM1Q9NRU3 951 aa5.86□□□□□ -1.47
CCDC39-204ENST00000476379 RTL1A6NKG5 1358 aa5.85□□□□□ -1.47
CCDC39-204ENST00000476379 PXDNQ92626 1479 aa5.85□□□□□ -1.47
CCDC39-204ENST00000476379 MINDY4BA8MYZ0 360 aa5.85□□□□□ -1.47
CCDC39-204ENST00000476379 PATL2C9JE40 543 aaKnown RBP5.85□□□□□ -1.47
CCDC39-204ENST00000476379 RXRBP28702 533 aa5.85□□□□□ -1.47
CCDC39-204ENST00000476379 FAM193AP78312 1265 aa5.85□□□□□ -1.47
CCDC39-204ENST00000476379 CFAP100Q494V2 611 aa5.85□□□□□ -1.47
CCDC39-204ENST00000476379 PI16Q6UXB8 463 aa5.85□□□□□ -1.47
CCDC39-204ENST00000476379 RUFY3Q7L099 469 aa5.85□□□□□ -1.47
CCDC39-204ENST00000476379 PCMTD1Q96MG8 357 aaPredicted RBP5.85□□□□□ -1.47
CCDC39-204ENST00000476379 RABEP2Q9H5N1 569 aa5.85□□□□□ -1.47
CCDC39-204ENST00000476379 ZBTB1Q9Y2K1 713 aa5.85□□□□□ -1.47
CCDC39-204ENST00000476379 RIOK3O14730 519 aaKnown RBP5.85□□□□□ -1.47
CCDC39-204ENST00000476379 TRDNQ13061 729 aa5.85□□□□□ -1.47
CCDC39-204ENST00000476379 TMC6Q7Z403 805 aa5.85□□□□□ -1.47
CCDC39-204ENST00000476379 AOPEPQ8N6M6 819 aa5.85□□□□□ -1.47
CCDC39-204ENST00000476379 STAMQ92783 540 aa5.85□□□□□ -1.47
CCDC39-204ENST00000476379 CHL1O00533 1208 aa5.85□□□□□ -1.47
CCDC39-204ENST00000476379 OFD1O75665 1012 aa5.85□□□□□ -1.47
CCDC39-204ENST00000476379 TNNT3P45378 269 aaPredicted RBP5.85□□□□□ -1.47
CCDC39-204ENST00000476379 TTC39AQ5SRH9 613 aa5.85□□□□□ -1.47
CCDC39-204ENST00000476379 CREB3L3Q68CJ9 461 aa5.85□□□□□ -1.47
CCDC39-204ENST00000476379 ILDR2Q71H61 639 aa5.85□□□□□ -1.47
CCDC39-204ENST00000476379 CCAR1Q8IX12 1150 aaKnown RBP5.85□□□□□ -1.47
CCDC39-204ENST00000476379 MNS1Q8NEH6 495 aa5.85□□□□□ -1.47
CCDC39-204ENST00000476379 SUCLG2Q96I99 432 aa5.85□□□□□ -1.47
CCDC39-204ENST00000476379 CHMP4AQ9BY43 222 aa5.85□□□□□ -1.47
CCDC39-204ENST00000476379 RGS17Q9UGC6 210 aaPredicted RBP5.85□□□□□ -1.47
CCDC39-204ENST00000476379 URI1O94763 535 aaPredicted RBP5.84□□□□□ -1.47
CCDC39-204ENST00000476379 LONRF3Q496Y0 759 aa5.84□□□□□ -1.47
CCDC39-204ENST00000476379 ZNF589Q86UQ0 364 aaPredicted RBP5.84□□□□□ -1.47
CCDC39-204ENST00000476379 GTF3C6Q969F1 213 aa5.84□□□□□ -1.47
CCDC39-204ENST00000476379 FAM89AQ96GI7 184 aa5.84□□□□□ -1.47
CCDC39-204ENST00000476379 MKI67P46013 3256 aaKnown RBP5.84□□□□□ -1.47
CCDC39-204ENST00000476379 MEGF6O75095 1541 aa5.84□□□□□ -1.47
CCDC39-204ENST00000476379 PIK3R4Q99570 1358 aa5.84□□□□□ -1.47
CCDC39-204ENST00000476379 PSMA5P28066 241 aa5.84□□□□□ -1.47
CCDC39-204ENST00000476379 TYRO3Q06418 890 aa5.84□□□□□ -1.47
CCDC39-204ENST00000476379 ZNF790Q6PG37 636 aa5.84□□□□□ -1.47
CCDC39-204ENST00000476379 EAF2Q96CJ1 260 aaPredicted RBP5.84□□□□□ -1.47
CCDC39-204ENST00000476379 PDCL3Q9H2J4 239 aa5.84□□□□□ -1.47
CCDC39-204ENST00000476379 PLEKHA4Q9H4M7 779 aa5.84□□□□□ -1.47
CCDC39-204ENST00000476379 TFCP2L1Q9NZI6 479 aa5.84□□□□□ -1.47
CCDC39-204ENST00000476379 TPCN1Q9ULQ1 816 aa5.84□□□□□ -1.47
CCDC39-204ENST00000476379 GOLGA8BA8MQT2 603 aa5.84□□□□□ -1.47
CCDC39-204ENST00000476379 HTATSF1O43719 755 aaKnown RBP5.84□□□□□ -1.47
CCDC39-204ENST00000476379 NR1I2O75469 434 aa5.84□□□□□ -1.47
CCDC39-204ENST00000476379 IFIT1P09914 478 aaKnown RBP5.84□□□□□ -1.47
CCDC39-204ENST00000476379 STX17P56962 302 aa5.84□□□□□ -1.47
CCDC39-204ENST00000476379 EZH2Q15910 746 aaKnown RBP5.84□□□□□ -1.47
CCDC39-204ENST00000476379 A0A0G2JLW4 131 aa5.84□□□□□ -1.48
CCDC39-204ENST00000476379 WTIPA6NIX2 430 aaPredicted RBP5.84□□□□□ -1.48
CCDC39-204ENST00000476379 MCM2P49736 904 aa5.84□□□□□ -1.48
CCDC39-204ENST00000476379 HSP90AB4PQ58FF6 505 aa5.84□□□□□ -1.48
CCDC39-204ENST00000476379 VPS37DQ86XT2 251 aa5.84□□□□□ -1.48
CCDC39-204ENST00000476379 PLIN2Q99541 437 aa5.84□□□□□ -1.48
CCDC39-204ENST00000476379 ABCC4O15439 1325 aa5.83□□□□□ -1.48
CCDC39-204ENST00000476379 IGSF1Q8N6C5 1336 aa5.83□□□□□ -1.48
CCDC39-204ENST00000476379 LAMA3Q16787 3333 aa5.83□□□□□ -1.48
CCDC39-204ENST00000476379 OVOS2A0A0J9YW53 1432 aa5.83□□□□□ -1.48
CCDC39-204ENST00000476379 OVOS2Q6IE36 1432 aa5.83□□□□□ -1.48
CCDC39-204ENST00000476379 PHACTR2O75167 634 aa5.83□□□□□ -1.48
CCDC39-204ENST00000476379 UBE2HP62256 183 aa5.83□□□□□ -1.48
CCDC39-204ENST00000476379 TEX35Q5T0J7 233 aa5.83□□□□□ -1.48
CCDC39-204ENST00000476379 OLFM4Q6UX06 510 aa5.83□□□□□ -1.48
CCDC39-204ENST00000476379 KRT27Q7Z3Y8 459 aa5.83□□□□□ -1.48
CCDC39-204ENST00000476379 TTC6Q86TZ1 520 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms