RNA–Protein interactions for RNA: ENST00000476259.1

RAPGEF3-208, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 824 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-208ENST00000476259 GGA1Q9UJY5 639 aa22.74■■□□□ 1.23
RAPGEF3-208ENST00000476259 SCN9AQ15858 1988 aa22.74■■□□□ 1.23
RAPGEF3-208ENST00000476259 GPRC5DQ9NZD1 345 aa22.73■■□□□ 1.23
RAPGEF3-208ENST00000476259 XDHP47989 1333 aa22.73■■□□□ 1.23
RAPGEF3-208ENST00000476259 A0A1B0GUL6 1792 aa22.72■■□□□ 1.23
RAPGEF3-208ENST00000476259 GMPSP49915 693 aaPredicted RBP22.72■■□□□ 1.23
RAPGEF3-208ENST00000476259 KLRG1Q96E93 195 aa22.72■■□□□ 1.23
RAPGEF3-208ENST00000476259 CDCA7LQ96GN5 454 aa22.72■■□□□ 1.23
RAPGEF3-208ENST00000476259 BCL2L13Q9BXK5 485 aa22.72■■□□□ 1.23
RAPGEF3-208ENST00000476259 ZC3H12CQ9C0D7 883 aaKnown RBP22.72■■□□□ 1.23
RAPGEF3-208ENST00000476259 ECE2O60344 883 aa22.71■■□□□ 1.23
RAPGEF3-208ENST00000476259 DOK7Q18PE1 504 aa22.71■■□□□ 1.23
RAPGEF3-208ENST00000476259 SLC4A10Q6U841 1118 aa22.71■■□□□ 1.23
RAPGEF3-208ENST00000476259 USP50Q70EL3 339 aaPredicted RBP22.71■■□□□ 1.23
RAPGEF3-208ENST00000476259 BSDC1Q9NW68 430 aaPredicted RBP22.71■■□□□ 1.23
RAPGEF3-208ENST00000476259 PASKQ96RG2 1323 aa22.71■■□□□ 1.23
RAPGEF3-208ENST00000476259 CSF1RP07333 972 aa22.7■■□□□ 1.22
RAPGEF3-208ENST00000476259 ITGA6P23229 1130 aa22.7■■□□□ 1.22
RAPGEF3-208ENST00000476259 FAM161AQ3B820 660 aa22.7■■□□□ 1.22
RAPGEF3-208ENST00000476259 MAP1SQ66K74 1059 aaPredicted RBP22.7■■□□□ 1.22
RAPGEF3-208ENST00000476259 MRPL50Q8N5N7 158 aaKnown RBP22.7■■□□□ 1.22
RAPGEF3-208ENST00000476259 ADARB2Q9NS39 739 aaKnown RBP22.7■■□□□ 1.22
RAPGEF3-208ENST00000476259 TRPM7Q96QT4 1865 aa22.7■■□□□ 1.22
RAPGEF3-208ENST00000476259 ITGBL1O95965 494 aaPredicted RBP22.69■■□□□ 1.22
RAPGEF3-208ENST00000476259 IGHMBP2P38935 993 aaKnown RBP22.69■■□□□ 1.22
RAPGEF3-208ENST00000476259 CNTROBQ8N137 903 aa22.69■■□□□ 1.22
RAPGEF3-208ENST00000476259 MINPP1Q9UNW1 487 aa22.69■■□□□ 1.22
RAPGEF3-208ENST00000476259 G3V3G9 751 aa22.68■■□□□ 1.22
RAPGEF3-208ENST00000476259 GRM8O00222 908 aa22.68■■□□□ 1.22
RAPGEF3-208ENST00000476259 PSMD14O00487 310 aa22.68■■□□□ 1.22
RAPGEF3-208ENST00000476259 ALDH1L1O75891 902 aa22.68■■□□□ 1.22
RAPGEF3-208ENST00000476259 ATP2B4P23634 1241 aa22.68■■□□□ 1.22
RAPGEF3-208ENST00000476259 DCAF8Q5TAQ9 597 aa22.68■■□□□ 1.22
RAPGEF3-208ENST00000476259 SRCIN1Q9C0H9 1055 aa22.68■■□□□ 1.22
RAPGEF3-208ENST00000476259 FOXO4P98177 505 aa22.67■■□□□ 1.22
RAPGEF3-208ENST00000476259 TRMT2AQ8IZ69 625 aaKnown RBP22.67■■□□□ 1.22
RAPGEF3-208ENST00000476259 SSH1Q8WYL5 1049 aa22.67■■□□□ 1.22
RAPGEF3-208ENST00000476259 KCNQ5Q9NR82 932 aa22.67■■□□□ 1.22
RAPGEF3-208ENST00000476259 CREBZFQ9NS37 354 aa22.67■■□□□ 1.22
RAPGEF3-208ENST00000476259 C9orf78Q9NZ63 289 aaPredicted RBP22.67■■□□□ 1.22
RAPGEF3-208ENST00000476259 PTPRCP08575 1304 aa22.66■■□□□ 1.22
RAPGEF3-208ENST00000476259 DIEXFQ68CQ4 756 aaKnown RBP22.66■■□□□ 1.22
RAPGEF3-208ENST00000476259 MPHOSPH8Q99549 860 aa22.66■■□□□ 1.22
RAPGEF3-208ENST00000476259 ZBTB12Q9Y330 459 aaPredicted RBP22.66■■□□□ 1.22
RAPGEF3-208ENST00000476259 ANKRD18BA2A2Z9 1011 aa22.65■■□□□ 1.22
RAPGEF3-208ENST00000476259 CCT4P50991 539 aaKnown RBP22.65■■□□□ 1.22
RAPGEF3-208ENST00000476259 CNOT7Q9UIV1 285 aaKnown RBP22.65■■□□□ 1.22
RAPGEF3-208ENST00000476259 CHMP3Q9Y3E7 222 aa22.65■■□□□ 1.22
RAPGEF3-208ENST00000476259 ZNF646O15015 1829 aaPredicted RBP22.65■■□□□ 1.22
RAPGEF3-208ENST00000476259 WTIPA6NIX2 430 aaPredicted RBP22.64■■□□□ 1.21
RAPGEF3-208ENST00000476259 ALDH1L2Q3SY69 923 aa22.64■■□□□ 1.21
RAPGEF3-208ENST00000476259 DPF2Q92785 391 aa22.64■■□□□ 1.21
RAPGEF3-208ENST00000476259 MED23Q9ULK4 1368 aa22.63■■□□□ 1.21
RAPGEF3-208ENST00000476259 SHTN1A0MZ66 631 aa22.63■■□□□ 1.21
RAPGEF3-208ENST00000476259 H7C1D1 291 aa22.63■■□□□ 1.21
RAPGEF3-208ENST00000476259 EPHA10Q5JZY3 1008 aa22.63■■□□□ 1.21
RAPGEF3-208ENST00000476259 LMBR1LQ6UX01 489 aa22.63■■□□□ 1.21
RAPGEF3-208ENST00000476259 MICALL2Q8IY33 904 aa22.63■■□□□ 1.21
RAPGEF3-208ENST00000476259 MIER1Q8N108 512 aa22.63■■□□□ 1.21
RAPGEF3-208ENST00000476259 JMYQ8N9B5 988 aa22.63■■□□□ 1.21
RAPGEF3-208ENST00000476259 TMEM88BA6NKF7 163 aa22.62■■□□□ 1.21
RAPGEF3-208ENST00000476259 RPS12P25398 132 aaKnown RBP22.62■■□□□ 1.21
RAPGEF3-208ENST00000476259 IFIT5Q13325 482 aaKnown RBP22.62■■□□□ 1.21
RAPGEF3-208ENST00000476259 ANKRD2Q9GZV1 360 aa22.62■■□□□ 1.21
RAPGEF3-208ENST00000476259 SMC4Q9NTJ3 1288 aa22.62■■□□□ 1.21
RAPGEF3-208ENST00000476259 POLR2AP24928 1970 aaKnown RBP22.61■■□□□ 1.21
RAPGEF3-208ENST00000476259 TRPM4Q8TD43 1214 aa22.61■■□□□ 1.21
RAPGEF3-208ENST00000476259 LEMD3Q9Y2U8 911 aa22.61■■□□□ 1.21
RAPGEF3-208ENST00000476259 VIL1P09327 827 aaKnown RBP22.6■■□□□ 1.21
RAPGEF3-208ENST00000476259 HIRAP54198 1017 aaPredicted RBP22.6■■□□□ 1.21
RAPGEF3-208ENST00000476259 MKRN1Q9UHC7 482 aaKnown RBP22.6■■□□□ 1.21
RAPGEF3-208ENST00000476259 CT47B1P0C2W7 299 aaPredicted RBP22.59■■□□□ 1.21
RAPGEF3-208ENST00000476259 NBPF7P0C2Y1 421 aaPredicted RBP22.59■■□□□ 1.21
RAPGEF3-208ENST00000476259 CHRNDQ07001 517 aa22.59■■□□□ 1.21
RAPGEF3-208ENST00000476259 CCDC57Q2TAC2 916 aa22.59■■□□□ 1.21
RAPGEF3-208ENST00000476259 PODNQ7Z5L7 613 aa22.59■■□□□ 1.21
RAPGEF3-208ENST00000476259 SUCLG2Q96I99 432 aa22.59■■□□□ 1.21
RAPGEF3-208ENST00000476259 ZNF804BA4D1E1 1349 aa22.58■■□□□ 1.21
RAPGEF3-208ENST00000476259 UTYO14607 1347 aa22.58■■□□□ 1.21
RAPGEF3-208ENST00000476259 FMR1Q06787 632 aaKnown RBP eCLIP22.58■■□□□ 1.21
RAPGEF3-208ENST00000476259 SAMD7Q7Z3H4 446 aa22.58■■□□□ 1.21
RAPGEF3-208ENST00000476259 ZC3H15Q8WU90 426 aaKnown RBP22.58■■□□□ 1.21
RAPGEF3-208ENST00000476259 PGAP2Q9UHJ9 254 aa22.58■■□□□ 1.21
RAPGEF3-208ENST00000476259 ZNF609O15014 1411 aa22.57■■□□□ 1.2
RAPGEF3-208ENST00000476259 TRAF5O00463 557 aa22.57■■□□□ 1.2
RAPGEF3-208ENST00000476259 KCNJ4P48050 445 aa22.57■■□□□ 1.2
RAPGEF3-208ENST00000476259 TAF7LQ5H9L4 462 aa22.57■■□□□ 1.2
RAPGEF3-208ENST00000476259 RSBN1LQ6PCB5 846 aaPredicted RBP22.57■■□□□ 1.2
RAPGEF3-208ENST00000476259 TXNRD3Q86VQ6 643 aa22.57■■□□□ 1.2
RAPGEF3-208ENST00000476259 ZNF594Q96JF6 807 aaPredicted RBP22.57■■□□□ 1.2
RAPGEF3-208ENST00000476259 CNTNAP1P78357 1384 aa22.57■■□□□ 1.2
RAPGEF3-208ENST00000476259 USP17L3A6NCW0 530 aa22.56■■□□□ 1.2
RAPGEF3-208ENST00000476259 USP17L4A6NCW7 530 aa22.56■■□□□ 1.2
RAPGEF3-208ENST00000476259 TBC1D10BQ4KMP7 808 aaPredicted RBP22.56■■□□□ 1.2
RAPGEF3-208ENST00000476259 USP17L1Q7RTZ2 530 aa22.56■■□□□ 1.2
RAPGEF3-208ENST00000476259 KAZALD1Q96I82 304 aa22.56■■□□□ 1.2
RAPGEF3-208ENST00000476259 TAF5LO75529 589 aa22.55■■□□□ 1.2
RAPGEF3-208ENST00000476259 EGFRP00533 1210 aa22.55■■□□□ 1.2
RAPGEF3-208ENST00000476259 KLRK1P26718 216 aa22.55■■□□□ 1.2
RAPGEF3-208ENST00000476259 RBM26Q5T8P6 1007 aaKnown RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms