RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 TAF1DQ9H5J8 278 aaPredicted RBP8.78□□□□□ -1
SHQ1-207ENST00000475558 CHPF2Q9P2E5 772 aa8.78□□□□□ -1
SHQ1-207ENST00000475558 ZNF330Q9Y3S2 320 aaPredicted RBP8.78□□□□□ -1
SHQ1-207ENST00000475558 UBR2Q8IWV8 1755 aa8.78□□□□□ -1
SHQ1-207ENST00000475558 SCN4AP35499 1836 aa8.77□□□□□ -1
SHQ1-207ENST00000475558 SLX4Q8IY92 1834 aa8.77□□□□□ -1
SHQ1-207ENST00000475558 ERVV-1B6SEH8 477 aa8.77□□□□□ -1.01
SHQ1-207ENST00000475558 ITGBL1O95965 494 aaPredicted RBP8.77□□□□□ -1.01
SHQ1-207ENST00000475558 VEGFBP49765 207 aa8.77□□□□□ -1.01
SHQ1-207ENST00000475558 HDAC1Q13547 482 aaPredicted RBP8.77□□□□□ -1.01
SHQ1-207ENST00000475558 CCDC93Q567U6 631 aa8.77□□□□□ -1.01
SHQ1-207ENST00000475558 COPS6Q7L5N1 327 aa8.77□□□□□ -1.01
SHQ1-207ENST00000475558 LINS1Q8NG48 757 aa8.77□□□□□ -1.01
SHQ1-207ENST00000475558 WBP1LQ9NX94 342 aa8.77□□□□□ -1.01
SHQ1-207ENST00000475558 PI4KAP2A4QPH2 592 aa8.76□□□□□ -1.01
SHQ1-207ENST00000475558 G3V3G9 751 aa8.76□□□□□ -1.01
SHQ1-207ENST00000475558 TCERG1O14776 1098 aaKnown RBP8.76□□□□□ -1.01
SHQ1-207ENST00000475558 CAMTA2O94983 1202 aa8.76□□□□□ -1.01
SHQ1-207ENST00000475558 A1BGP04217 495 aa8.76□□□□□ -1.01
SHQ1-207ENST00000475558 GNAI2P04899 355 aa8.76□□□□□ -1.01
SHQ1-207ENST00000475558 RLBP1P12271 317 aa8.76□□□□□ -1.01
SHQ1-207ENST00000475558 NPR1P16066 1061 aa8.76□□□□□ -1.01
SHQ1-207ENST00000475558 FKBP4Q02790 459 aaKnown RBP eCLIP8.76□□□□□ -1.01
SHQ1-207ENST00000475558 TRIM28Q13263 835 aaKnown RBP8.76□□□□□ -1.01
SHQ1-207ENST00000475558 PDIA6Q15084 440 aa8.76□□□□□ -1.01
SHQ1-207ENST00000475558 DEFB115Q30KQ5 88 aa8.76□□□□□ -1.01
SHQ1-207ENST00000475558 EAPPQ56P03 285 aaPredicted RBP8.76□□□□□ -1.01
SHQ1-207ENST00000475558 SLC4A10Q6U841 1118 aa8.76□□□□□ -1.01
SHQ1-207ENST00000475558 CLEC4GQ6UXB4 293 aa8.76□□□□□ -1.01
SHQ1-207ENST00000475558 KIF6Q6ZMV9 814 aa8.76□□□□□ -1.01
SHQ1-207ENST00000475558 G2E3Q7L622 706 aa8.76□□□□□ -1.01
SHQ1-207ENST00000475558 PNMA8AQ86V59 439 aaPredicted RBP8.76□□□□□ -1.01
SHQ1-207ENST00000475558 DZIP3Q86Y13 1208 aaKnown RBP8.76□□□□□ -1.01
SHQ1-207ENST00000475558 PI4KAP1Q8N8J0 262 aa8.76□□□□□ -1.01
SHQ1-207ENST00000475558 C7orf43Q8WVR3 580 aa8.76□□□□□ -1.01
SHQ1-207ENST00000475558 NECTIN2Q92692 538 aa8.76□□□□□ -1.01
SHQ1-207ENST00000475558 GCC1Q96CN9 775 aa8.76□□□□□ -1.01
SHQ1-207ENST00000475558 METTL22Q9BUU2 404 aaPredicted RBP8.76□□□□□ -1.01
SHQ1-207ENST00000475558 HACL1Q9UJ83 578 aa8.76□□□□□ -1.01
SHQ1-207ENST00000475558 COL11A2P13942 1736 aaPredicted RBP8.76□□□□□ -1.01
SHQ1-207ENST00000475558 SCN7AQ01118 1682 aa8.75□□□□□ -1.01
SHQ1-207ENST00000475558 EPHX2P34913 555 aa8.75□□□□□ -1.01
SHQ1-207ENST00000475558 LBX1P52954 281 aa8.75□□□□□ -1.01
SHQ1-207ENST00000475558 MAP2K1Q02750 393 aaPredicted RBP8.75□□□□□ -1.01
SHQ1-207ENST00000475558 BEND3Q5T5X7 828 aa8.75□□□□□ -1.01
SHQ1-207ENST00000475558 NBPF5PQ86XG9 351 aaPredicted RBP8.75□□□□□ -1.01
SHQ1-207ENST00000475558 RTKN2Q8IZC4 609 aa8.75□□□□□ -1.01
SHQ1-207ENST00000475558 XAGE3Q8WTP9 111 aa8.75□□□□□ -1.01
SHQ1-207ENST00000475558 PHAXQ9H814 394 aaKnown RBP8.75□□□□□ -1.01
SHQ1-207ENST00000475558 C9orf78Q9NZ63 289 aaPredicted RBP8.75□□□□□ -1.01
SHQ1-207ENST00000475558 ZNF652Q9Y2D9 606 aa8.75□□□□□ -1.01
SHQ1-207ENST00000475558 MAP3K2Q9Y2U5 619 aa8.75□□□□□ -1.01
SHQ1-207ENST00000475558 CACNA1SQ13698 1873 aa8.74□□□□□ -1.01
SHQ1-207ENST00000475558 ARFGEF2Q9Y6D5 1785 aa8.74□□□□□ -1.01
SHQ1-207ENST00000475558 KLRG2A4D1S0 409 aaPredicted RBP8.74□□□□□ -1.01
SHQ1-207ENST00000475558 RASSF10A6NK89 507 aa8.74□□□□□ -1.01
SHQ1-207ENST00000475558 MYL6BP14649 208 aa8.74□□□□□ -1.01
SHQ1-207ENST00000475558 AIMP1Q12904 312 aaKnown RBP8.74□□□□□ -1.01
SHQ1-207ENST00000475558 PDAP1Q13442 181 aaKnown RBP8.74□□□□□ -1.01
SHQ1-207ENST00000475558 HSP90AB4PQ58FF6 505 aa8.74□□□□□ -1.01
SHQ1-207ENST00000475558 B4GALNT3Q6L9W6 998 aa8.74□□□□□ -1.01
SHQ1-207ENST00000475558 TPTE2Q6XPS3 522 aa8.74□□□□□ -1.01
SHQ1-207ENST00000475558 CNTROBQ8N137 903 aa8.74□□□□□ -1.01
SHQ1-207ENST00000475558 CCDC191Q8NCU4 936 aa8.74□□□□□ -1.01
SHQ1-207ENST00000475558 EIF5BO60841 1220 aaKnown RBP8.73□□□□□ -1.01
SHQ1-207ENST00000475558 SLC34A2O95436 690 aa8.73□□□□□ -1.01
SHQ1-207ENST00000475558 UBTFL1P0CB47 393 aaPredicted RBP8.73□□□□□ -1.01
SHQ1-207ENST00000475558 HSPA8P11142 646 aaKnown RBP8.73□□□□□ -1.01
SHQ1-207ENST00000475558 ALDH1B1P30837 517 aa8.73□□□□□ -1.01
SHQ1-207ENST00000475558 TCIRG1Q13488 830 aa8.73□□□□□ -1.01
SHQ1-207ENST00000475558 LRP10Q7Z4F1 713 aa8.73□□□□□ -1.01
SHQ1-207ENST00000475558 GPC2Q8N158 579 aa8.73□□□□□ -1.01
SHQ1-207ENST00000475558 ABHD8Q96I13 439 aa8.73□□□□□ -1.01
SHQ1-207ENST00000475558 USP44Q9H0E7 712 aa8.73□□□□□ -1.01
SHQ1-207ENST00000475558 ZNF277Q9NRM2 450 aaPredicted RBP8.73□□□□□ -1.01
SHQ1-207ENST00000475558 CIZ1Q9ULV3 898 aaPredicted RBP8.73□□□□□ -1.01
SHQ1-207ENST00000475558 WDR33Q9C0J8 1336 aaKnown RBP8.73□□□□□ -1.01
SHQ1-207ENST00000475558 ZNF541Q9H0D2 1346 aa8.73□□□□□ -1.01
SHQ1-207ENST00000475558 PRAMEF22A3QJZ6 481 aa8.72□□□□□ -1.01
SHQ1-207ENST00000475558 FAM205CA6NFA0 338 aa8.72□□□□□ -1.01
SHQ1-207ENST00000475558 NBPF26B4DH59 902 aa8.72□□□□□ -1.01
SHQ1-207ENST00000475558 F6X3S4 739 aa8.72□□□□□ -1.01
SHQ1-207ENST00000475558 FZD9O00144 591 aa8.72□□□□□ -1.01
SHQ1-207ENST00000475558 IARSP41252 1262 aaKnown RBP8.72□□□□□ -1.01
SHQ1-207ENST00000475558 ATP8B2P98198 1209 aa8.72□□□□□ -1.01
SHQ1-207ENST00000475558 MAP1SQ66K74 1059 aaPredicted RBP8.72□□□□□ -1.01
SHQ1-207ENST00000475558 NBPF10Q6P3W6 841 aaKnown RBP8.72□□□□□ -1.01
SHQ1-207ENST00000475558 SYNE4Q8N205 404 aa8.72□□□□□ -1.01
SHQ1-207ENST00000475558 NBPF15Q8N660 670 aa8.72□□□□□ -1.01
SHQ1-207ENST00000475558 ANKRD44Q8N8A2 993 aa8.72□□□□□ -1.01
SHQ1-207ENST00000475558 JDP2Q8WYK2 163 aa8.72□□□□□ -1.01
SHQ1-207ENST00000475558 ABT1Q9ULW3 272 aaKnown RBP8.72□□□□□ -1.01
SHQ1-207ENST00000475558 UTYO14607 1347 aa8.72□□□□□ -1.01
SHQ1-207ENST00000475558 DLG5Q8TDM6 1919 aa8.72□□□□□ -1.01
SHQ1-207ENST00000475558 SIPA1L3O60292 1781 aaPredicted RBP8.71□□□□□ -1.01
SHQ1-207ENST00000475558 GRM8O00222 908 aa8.71□□□□□ -1.02
SHQ1-207ENST00000475558 RAB11FIP3O75154 756 aa8.71□□□□□ -1.02
SHQ1-207ENST00000475558 GTF2E1P29083 439 aaPredicted RBP8.71□□□□□ -1.02
SHQ1-207ENST00000475558 ECE1P42892 770 aa8.71□□□□□ -1.02
SHQ1-207ENST00000475558 EIF6P56537 245 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms