RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 CNNM1Q9NRU3 951 aa18.77■□□□□ 0.6
MCF2L-224ENST00000475524 PA2G4Q9UQ80 394 aaKnown RBP18.77■□□□□ 0.6
MCF2L-224ENST00000475524 ATP6V0A2Q9Y487 856 aa18.77■□□□□ 0.6
MCF2L-224ENST00000475524 A0A0G2JLW4 131 aa18.76■□□□□ 0.59
MCF2L-224ENST00000475524 SOGA3Q5TF21 947 aa18.76■□□□□ 0.59
MCF2L-224ENST00000475524 ATG9AQ7Z3C6 839 aa18.76■□□□□ 0.59
MCF2L-224ENST00000475524 ZNF594Q96JF6 807 aaPredicted RBP18.76■□□□□ 0.59
MCF2L-224ENST00000475524 SYT17Q9BSW7 474 aa18.76■□□□□ 0.59
MCF2L-224ENST00000475524 ARAP2Q8WZ64 1704 aa18.75■□□□□ 0.59
MCF2L-224ENST00000475524 IGHDP01880 384 aa18.75■□□□□ 0.59
MCF2L-224ENST00000475524 CENPQQ7L2Z9 268 aaPredicted RBP18.75■□□□□ 0.59
MCF2L-224ENST00000475524 KLHL34Q8N239 644 aa18.75■□□□□ 0.59
MCF2L-224ENST00000475524 KLHDC4Q8TBB5 520 aa18.75■□□□□ 0.59
MCF2L-224ENST00000475524 KIF1BPQ96EK5 621 aa18.75■□□□□ 0.59
MCF2L-224ENST00000475524 ANKRD2Q9GZV1 360 aa18.75■□□□□ 0.59
MCF2L-224ENST00000475524 TMX4Q9H1E5 349 aaPredicted RBP18.75■□□□□ 0.59
MCF2L-224ENST00000475524 KDM2BQ8NHM5 1336 aa18.74■□□□□ 0.59
MCF2L-224ENST00000475524 DALRD3Q5D0E6 543 aaKnown RBP18.74■□□□□ 0.59
MCF2L-224ENST00000475524 C7orf43Q8WVR3 580 aa18.74■□□□□ 0.59
MCF2L-224ENST00000475524 GPR108Q9NPR9 543 aa18.74■□□□□ 0.59
MCF2L-224ENST00000475524 MINPP1Q9UNW1 487 aa18.74■□□□□ 0.59
MCF2L-224ENST00000475524 EXOC6BQ9Y2D4 811 aa18.74■□□□□ 0.59
MCF2L-224ENST00000475524 SNED1Q8TER0 1413 aa18.74■□□□□ 0.59
MCF2L-224ENST00000475524 OS9Q13438 667 aaPredicted RBP18.73■□□□□ 0.59
MCF2L-224ENST00000475524 LRRC24Q50LG9 513 aa18.73■□□□□ 0.59
MCF2L-224ENST00000475524 VGLL2Q8N8G2 317 aa18.73■□□□□ 0.59
MCF2L-224ENST00000475524 NLGN2Q8NFZ4 835 aa18.73■□□□□ 0.59
MCF2L-224ENST00000475524 PUS3Q9BZE2 481 aaKnown RBP18.73■□□□□ 0.59
MCF2L-224ENST00000475524 SIL1Q9H173 461 aa18.73■□□□□ 0.59
MCF2L-224ENST00000475524 PODXL2Q9NZ53 605 aa18.73■□□□□ 0.59
MCF2L-224ENST00000475524 CEP126Q9P2H0 1117 aa18.73■□□□□ 0.59
MCF2L-224ENST00000475524 FER1L6Q2WGJ9 1857 aa18.72■□□□□ 0.59
MCF2L-224ENST00000475524 CHRNDQ07001 517 aa18.72■□□□□ 0.59
MCF2L-224ENST00000475524 RHPN1Q8TCX5 695 aa18.72■□□□□ 0.59
MCF2L-224ENST00000475524 LRRCC1Q9C099 1032 aa18.72■□□□□ 0.59
MCF2L-224ENST00000475524 AKAP2Q9Y2D5 859 aa18.72■□□□□ 0.59
MCF2L-224ENST00000475524 XDHP47989 1333 aa18.72■□□□□ 0.59
MCF2L-224ENST00000475524 SASH1O94885 1247 aa18.71■□□□□ 0.59
MCF2L-224ENST00000475524 PDE8BO95263 885 aa18.71■□□□□ 0.59
MCF2L-224ENST00000475524 METTL24Q5JXM2 366 aa18.71■□□□□ 0.59
MCF2L-224ENST00000475524 LEMD3Q9Y2U8 911 aa18.71■□□□□ 0.59
MCF2L-224ENST00000475524 ZNF609O15014 1411 aa18.7■□□□□ 0.58
MCF2L-224ENST00000475524 UBE4AQ14139 1066 aa18.7■□□□□ 0.58
MCF2L-224ENST00000475524 CCDC93Q567U6 631 aa18.7■□□□□ 0.58
MCF2L-224ENST00000475524 RTKN2Q8IZC4 609 aa18.7■□□□□ 0.58
MCF2L-224ENST00000475524 DUOX1Q9NRD9 1551 aa18.69■□□□□ 0.58
MCF2L-224ENST00000475524 ATP2B4P23634 1241 aa18.69■□□□□ 0.58
MCF2L-224ENST00000475524 PUM3Q15397 648 aaKnown RBP18.69■□□□□ 0.58
MCF2L-224ENST00000475524 ZBTB47Q9UFB7 747 aaPredicted RBP18.69■□□□□ 0.58
MCF2L-224ENST00000475524 GTF3C3Q9Y5Q9 886 aa18.69■□□□□ 0.58
MCF2L-224ENST00000475524 C15orf52Q6ZUT6 534 aaKnown RBP18.68■□□□□ 0.58
MCF2L-224ENST00000475524 CLASRPQ8N2M8 674 aaKnown RBP18.68■□□□□ 0.58
MCF2L-224ENST00000475524 RTFDC1Q9BY42 306 aaPredicted RBP18.68■□□□□ 0.58
MCF2L-224ENST00000475524 FGFR2P21802 821 aa18.67■□□□□ 0.58
MCF2L-224ENST00000475524 NUCB1Q02818 461 aa18.67■□□□□ 0.58
MCF2L-224ENST00000475524 TFCP2Q12800 502 aa18.67■□□□□ 0.58
MCF2L-224ENST00000475524 B4GALNT3Q6L9W6 998 aa18.67■□□□□ 0.58
MCF2L-224ENST00000475524 MPNDQ8N594 471 aa18.67■□□□□ 0.58
MCF2L-224ENST00000475524 SUPT20HQ8NEM7 779 aa18.67■□□□□ 0.58
MCF2L-224ENST00000475524 LPIN2Q92539 896 aa18.67■□□□□ 0.58
MCF2L-224ENST00000475524 PSMD1Q99460 953 aa18.67■□□□□ 0.58
MCF2L-224ENST00000475524 VPS33BQ9H267 617 aa18.67■□□□□ 0.58
MCF2L-224ENST00000475524 ANKIB1Q9P2G1 1089 aa18.67■□□□□ 0.58
MCF2L-224ENST00000475524 LTBP3Q9NS15 1303 aa18.67■□□□□ 0.58
MCF2L-224ENST00000475524 ZBTB22O15209 634 aa18.66■□□□□ 0.58
MCF2L-224ENST00000475524 C21orf2O43822 256 aa18.66■□□□□ 0.58
MCF2L-224ENST00000475524 GPSM2P81274 684 aa18.66■□□□□ 0.58
MCF2L-224ENST00000475524 ATP2B3Q16720 1220 aa18.66■□□□□ 0.58
MCF2L-224ENST00000475524 TNNI3KQ59H18 835 aa18.66■□□□□ 0.58
MCF2L-224ENST00000475524 DPP8Q6V1X1 898 aaPredicted RBP18.66■□□□□ 0.58
MCF2L-224ENST00000475524 GGA1Q9UJY5 639 aa18.66■□□□□ 0.58
MCF2L-224ENST00000475524 NSFL1CQ9UNZ2 370 aaKnown RBP18.66■□□□□ 0.58
MCF2L-224ENST00000475524 BCS1LQ9Y276 419 aa18.66■□□□□ 0.58
MCF2L-224ENST00000475524 FPGT-TNNI3KV9GXZ4 949 aa18.66■□□□□ 0.58
MCF2L-224ENST00000475524 MED23Q9ULK4 1368 aa18.66■□□□□ 0.58
MCF2L-224ENST00000475524 IFIT1P09914 478 aaKnown RBP18.65■□□□□ 0.58
MCF2L-224ENST00000475524 SLC5A1P13866 664 aa18.65■□□□□ 0.58
MCF2L-224ENST00000475524 ANKRD45Q5TZF3 282 aa18.65■□□□□ 0.58
MCF2L-224ENST00000475524 CHD1LQ86WJ1 897 aa18.65■□□□□ 0.58
MCF2L-224ENST00000475524 ZNF804BA4D1E1 1349 aa18.65■□□□□ 0.58
MCF2L-224ENST00000475524 KCNJ4P48050 445 aa18.64■□□□□ 0.57
MCF2L-224ENST00000475524 TBC1D16Q8TBP0 767 aa18.64■□□□□ 0.57
MCF2L-224ENST00000475524 EYA3Q99504 573 aa18.64■□□□□ 0.57
MCF2L-224ENST00000475524 A0A1B0GUL7 405 aa18.63■□□□□ 0.57
MCF2L-224ENST00000475524 TAF5LO75529 589 aa18.63■□□□□ 0.57
MCF2L-224ENST00000475524 UFL1O94874 794 aa18.63■□□□□ 0.57
MCF2L-224ENST00000475524 FKBP4Q02790 459 aaKnown RBP eCLIP18.63■□□□□ 0.571e-7■■■■■ 33.2
MCF2L-224ENST00000475524 HELBQ8NG08 1087 aaPredicted RBP18.63■□□□□ 0.57
MCF2L-224ENST00000475524 IRS2Q9Y4H2 1338 aa18.63■□□□□ 0.57
MCF2L-224ENST00000475524 APBB1O00213 710 aa18.62■□□□□ 0.57
MCF2L-224ENST00000475524 EAF2Q96CJ1 260 aaPredicted RBP18.62■□□□□ 0.57
MCF2L-224ENST00000475524 IL1RAPL2Q9NP60 686 aa18.62■□□□□ 0.57
MCF2L-224ENST00000475524 IFIT2P09913 472 aaKnown RBP18.61■□□□□ 0.57
MCF2L-224ENST00000475524 AACSQ86V21 672 aa18.61■□□□□ 0.57
MCF2L-224ENST00000475524 POLLQ9UGP5 575 aa18.61■□□□□ 0.57
MCF2L-224ENST00000475524 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.61■□□□□ 0.57
MCF2L-224ENST00000475524 DICER1Q9UPY3 1922 aaKnown RBP18.61■□□□□ 0.57
MCF2L-224ENST00000475524 SALL3Q9BXA9 1300 aa18.6■□□□□ 0.57
MCF2L-224ENST00000475524 C6orf229H3BNL8 230 aa18.6■□□□□ 0.57
MCF2L-224ENST00000475524 OLFM4Q6UX06 510 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms