RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 LMOD1P29536 600 aaPredicted RBP19.79■□□□□ 0.76
CPSF3-203ENST00000475482 EAPPQ56P03 285 aaPredicted RBP19.79■□□□□ 0.76
CPSF3-203ENST00000475482 ANKRD18AQ8IVF6 992 aa19.79■□□□□ 0.76
CPSF3-203ENST00000475482 CCDC85AQ96PX6 553 aaPredicted RBP19.79■□□□□ 0.76
CPSF3-203ENST00000475482 GREM2Q9H772 168 aa19.79■□□□□ 0.76
CPSF3-203ENST00000475482 SCN9AQ15858 1988 aa19.79■□□□□ 0.76
CPSF3-203ENST00000475482 C6orf229H3BNL8 230 aa19.78■□□□□ 0.76
CPSF3-203ENST00000475482 CSF1RP07333 972 aa19.78■□□□□ 0.76
CPSF3-203ENST00000475482 TNIP1Q15025 636 aa19.78■□□□□ 0.76
CPSF3-203ENST00000475482 USP50Q70EL3 339 aaPredicted RBP19.78■□□□□ 0.76
CPSF3-203ENST00000475482 CDC5LQ99459 802 aaKnown RBP19.78■□□□□ 0.76
CPSF3-203ENST00000475482 EYA3Q99504 573 aa19.78■□□□□ 0.76
CPSF3-203ENST00000475482 CREBZFQ9NS37 354 aa19.78■□□□□ 0.76
CPSF3-203ENST00000475482 BSDC1Q9NW68 430 aaPredicted RBP19.78■□□□□ 0.76
CPSF3-203ENST00000475482 F6X3S4 739 aa19.77■□□□□ 0.76
CPSF3-203ENST00000475482 RAD17O75943 681 aa19.77■□□□□ 0.76
CPSF3-203ENST00000475482 PCNTO95613 3336 aa19.77■□□□□ 0.75
CPSF3-203ENST00000475482 SPEF2Q9C093 1822 aa19.76■□□□□ 0.75
CPSF3-203ENST00000475482 GMPSP49915 693 aaPredicted RBP19.76■□□□□ 0.75
CPSF3-203ENST00000475482 ERICH6BQ5W0A0 696 aa19.76■□□□□ 0.75
CPSF3-203ENST00000475482 CNTROBQ8N137 903 aa19.76■□□□□ 0.75
CPSF3-203ENST00000475482 ADARB2Q9NS39 739 aaKnown RBP19.76■□□□□ 0.75
CPSF3-203ENST00000475482 PSME4Q14997 1843 aa19.76■□□□□ 0.75
CPSF3-203ENST00000475482 XDHP47989 1333 aa19.76■□□□□ 0.75
CPSF3-203ENST00000475482 RIMBP2O15034 1052 aa19.75■□□□□ 0.75
CPSF3-203ENST00000475482 MAP1SQ66K74 1059 aaPredicted RBP19.75■□□□□ 0.75
CPSF3-203ENST00000475482 GPR101Q96P66 508 aaPredicted RBP19.75■□□□□ 0.75
CPSF3-203ENST00000475482 DBNDD1Q9H9R9 158 aa19.75■□□□□ 0.75
CPSF3-203ENST00000475482 ANKIB1Q9P2G1 1089 aa19.75■□□□□ 0.75
CPSF3-203ENST00000475482 PGAP2Q9UHJ9 254 aa19.75■□□□□ 0.75
CPSF3-203ENST00000475482 GGA1Q9UJY5 639 aa19.75■□□□□ 0.75
CPSF3-203ENST00000475482 ECE2O60344 883 aa19.74■□□□□ 0.75
CPSF3-203ENST00000475482 UFL1O94874 794 aa19.74■□□□□ 0.75
CPSF3-203ENST00000475482 RRP1P56182 461 aaKnown RBP19.74■□□□□ 0.75
CPSF3-203ENST00000475482 DPF2Q92785 391 aa19.74■□□□□ 0.75
CPSF3-203ENST00000475482 ZC3H12CQ9C0D7 883 aaKnown RBP19.74■□□□□ 0.75
CPSF3-203ENST00000475482 MINPP1Q9UNW1 487 aa19.74■□□□□ 0.75
CPSF3-203ENST00000475482 CLEC11AQ9Y240 323 aa19.74■□□□□ 0.75
CPSF3-203ENST00000475482 PSMD14O00487 310 aa19.73■□□□□ 0.75
CPSF3-203ENST00000475482 ATP2B4P23634 1241 aa19.73■□□□□ 0.75
CPSF3-203ENST00000475482 FOXO4P98177 505 aa19.73■□□□□ 0.75
CPSF3-203ENST00000475482 MRPL50Q8N5N7 158 aaKnown RBP19.73■□□□□ 0.75
CPSF3-203ENST00000475482 KCNQ5Q9NR82 932 aa19.73■□□□□ 0.75
CPSF3-203ENST00000475482 ZNF609O15014 1411 aa19.72■□□□□ 0.75
CPSF3-203ENST00000475482 ALDH1L1O75891 902 aa19.72■□□□□ 0.75
CPSF3-203ENST00000475482 ITGA6P23229 1130 aa19.72■□□□□ 0.75
CPSF3-203ENST00000475482 DOK7Q18PE1 504 aa19.72■□□□□ 0.75
CPSF3-203ENST00000475482 FAM161AQ3B820 660 aa19.72■□□□□ 0.75
CPSF3-203ENST00000475482 TRPM7Q96QT4 1865 aa19.71■□□□□ 0.75
CPSF3-203ENST00000475482 TMEM88BA6NKF7 163 aa19.71■□□□□ 0.75
CPSF3-203ENST00000475482 HIRAP54198 1017 aaPredicted RBP19.71■□□□□ 0.75
CPSF3-203ENST00000475482 BCL2L13Q9BXK5 485 aa19.71■□□□□ 0.75
CPSF3-203ENST00000475482 CNOT7Q9UIV1 285 aaKnown RBP19.71■□□□□ 0.75
CPSF3-203ENST00000475482 WTIPA6NIX2 430 aaPredicted RBP19.7■□□□□ 0.74
CPSF3-203ENST00000475482 GRM8O00222 908 aa19.7■□□□□ 0.74
CPSF3-203ENST00000475482 VIL1P09327 827 aaKnown RBP19.7■□□□□ 0.74
CPSF3-203ENST00000475482 RPS12P25398 132 aaKnown RBP19.7■□□□□ 0.74
CPSF3-203ENST00000475482 ZC3H15Q8WU90 426 aaKnown RBP19.7■□□□□ 0.74
CPSF3-203ENST00000475482 ZBTB12Q9Y330 459 aaPredicted RBP19.7■□□□□ 0.74
CPSF3-203ENST00000475482 MED23Q9ULK4 1368 aa19.7■□□□□ 0.74
CPSF3-203ENST00000475482 SHTN1A0MZ66 631 aa19.69■□□□□ 0.74
CPSF3-203ENST00000475482 IGHMBP2P38935 993 aaKnown RBP19.69■□□□□ 0.74
CPSF3-203ENST00000475482 CCT4P50991 539 aaKnown RBP19.69■□□□□ 0.74
CPSF3-203ENST00000475482 RARSP54136 660 aaKnown RBP19.69■□□□□ 0.74
CPSF3-203ENST00000475482 EPHA10Q5JZY3 1008 aa19.69■□□□□ 0.74
CPSF3-203ENST00000475482 SSH1Q8WYL5 1049 aa19.69■□□□□ 0.74
CPSF3-203ENST00000475482 UTYO14607 1347 aa19.69■□□□□ 0.74
CPSF3-203ENST00000475482 ZNF646O15015 1829 aaPredicted RBP19.69■□□□□ 0.74
CPSF3-203ENST00000475482 CNTNAP1P78357 1384 aa19.69■□□□□ 0.74
CPSF3-203ENST00000475482 A0A1B0GUL6 1792 aa19.68■□□□□ 0.74
CPSF3-203ENST00000475482 ALDH1L2Q3SY69 923 aa19.68■□□□□ 0.74
CPSF3-203ENST00000475482 MICALL2Q8IY33 904 aa19.68■□□□□ 0.74
CPSF3-203ENST00000475482 TRPM4Q8TD43 1214 aa19.68■□□□□ 0.74
CPSF3-203ENST00000475482 SRCIN1Q9C0H9 1055 aa19.68■□□□□ 0.74
CPSF3-203ENST00000475482 LEMD3Q9Y2U8 911 aa19.68■□□□□ 0.74
CPSF3-203ENST00000475482 PTPRCP08575 1304 aa19.68■□□□□ 0.74
CPSF3-203ENST00000475482 POLR2AP24928 1970 aaKnown RBP19.68■□□□□ 0.74
CPSF3-203ENST00000475482 H7C1D1 291 aa19.67■□□□□ 0.74
CPSF3-203ENST00000475482 PODNQ7Z5L7 613 aa19.67■□□□□ 0.74
CPSF3-203ENST00000475482 ANKRD18BA2A2Z9 1011 aa19.66■□□□□ 0.74
CPSF3-203ENST00000475482 SLC4A10Q6U841 1118 aa19.66■□□□□ 0.74
CPSF3-203ENST00000475482 KAZALD1Q96I82 304 aa19.66■□□□□ 0.74
CPSF3-203ENST00000475482 MPHOSPH8Q99549 860 aa19.66■□□□□ 0.74
CPSF3-203ENST00000475482 ANKRD2Q9GZV1 360 aa19.66■□□□□ 0.74
CPSF3-203ENST00000475482 RASSF10A6NK89 507 aa19.65■□□□□ 0.74
CPSF3-203ENST00000475482 MS4A1P11836 297 aa19.65■□□□□ 0.74
CPSF3-203ENST00000475482 FMR1Q06787 632 aaKnown RBP eCLIP19.65■□□□□ 0.74
CPSF3-203ENST00000475482 LMBR1LQ6UX01 489 aa19.65■□□□□ 0.74
CPSF3-203ENST00000475482 AGBL3Q8NEM8 1001 aa19.65■□□□□ 0.74
CPSF3-203ENST00000475482 GMLQ99445 158 aa19.65■□□□□ 0.74
CPSF3-203ENST00000475482 C9orf78Q9NZ63 289 aaPredicted RBP19.65■□□□□ 0.74
CPSF3-203ENST00000475482 MKRN1Q9UHC7 482 aaKnown RBP19.65■□□□□ 0.74
CPSF3-203ENST00000475482 EGFRP00533 1210 aa19.64■□□□□ 0.73
CPSF3-203ENST00000475482 BRPF1P55201 1214 aaPredicted RBP19.64■□□□□ 0.73
CPSF3-203ENST00000475482 CHRNDQ07001 517 aa19.64■□□□□ 0.73
CPSF3-203ENST00000475482 IFIT5Q13325 482 aaKnown RBP19.64■□□□□ 0.73
CPSF3-203ENST00000475482 CST9Q5W186 159 aa19.64■□□□□ 0.73
CPSF3-203ENST00000475482 RSBN1LQ6PCB5 846 aaPredicted RBP19.64■□□□□ 0.73
CPSF3-203ENST00000475482 SAMD7Q7Z3H4 446 aa19.64■□□□□ 0.73
CPSF3-203ENST00000475482 TXNRD3Q86VQ6 643 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms