RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 UBE3BQ7Z3V4 1068 aa14.6□□□□□ -0.07
HLA-DOB-208ENST00000475235 LDHDQ86WU2 507 aa14.6□□□□□ -0.07
HLA-DOB-208ENST00000475235 ANKRD18AQ8IVF6 992 aa14.6□□□□□ -0.07
HLA-DOB-208ENST00000475235 EYA3Q99504 573 aa14.6□□□□□ -0.07
HLA-DOB-208ENST00000475235 SEC31BQ9NQW1 1179 aa14.6□□□□□ -0.07
HLA-DOB-208ENST00000475235 COL4A5P29400 1685 aa14.59□□□□□ -0.07
HLA-DOB-208ENST00000475235 RTL9Q8NET4 1388 aa14.59□□□□□ -0.07
HLA-DOB-208ENST00000475235 EPHX2P34913 555 aa14.59□□□□□ -0.07
HLA-DOB-208ENST00000475235 SLFN5Q08AF3 891 aa14.59□□□□□ -0.07
HLA-DOB-208ENST00000475235 WASHC4Q2M389 1173 aa14.59□□□□□ -0.07
HLA-DOB-208ENST00000475235 TTLL11Q8NHH1 800 aa14.59□□□□□ -0.07
HLA-DOB-208ENST00000475235 CCDC85AQ96PX6 553 aaPredicted RBP14.59□□□□□ -0.07
HLA-DOB-208ENST00000475235 PLA2G12BQ9BX93 195 aa14.59□□□□□ -0.07
HLA-DOB-208ENST00000475235 C6orf229H3BNL8 230 aa14.58□□□□□ -0.08
HLA-DOB-208ENST00000475235 GPSM2P81274 684 aa14.58□□□□□ -0.08
HLA-DOB-208ENST00000475235 CXCL9Q07325 125 aa14.57□□□□□ -0.08
HLA-DOB-208ENST00000475235 TNIP1Q15025 636 aa14.57□□□□□ -0.08
HLA-DOB-208ENST00000475235 BEND3Q5T5X7 828 aa14.57□□□□□ -0.08
HLA-DOB-208ENST00000475235 TBC1D16Q8TBP0 767 aa14.57□□□□□ -0.08
HLA-DOB-208ENST00000475235 ANKIB1Q9P2G1 1089 aa14.57□□□□□ -0.08
HLA-DOB-208ENST00000475235 LRRC37AA6NMS7 1700 aa14.57□□□□□ -0.08
HLA-DOB-208ENST00000475235 F6X3S4 739 aa14.56□□□□□ -0.08
HLA-DOB-208ENST00000475235 SCNN1DP51172 638 aa14.56□□□□□ -0.08
HLA-DOB-208ENST00000475235 CASP7P55210 303 aa14.56□□□□□ -0.08
HLA-DOB-208ENST00000475235 EAPPQ56P03 285 aaPredicted RBP14.56□□□□□ -0.08
HLA-DOB-208ENST00000475235 CIAPIN1Q6FI81 312 aa14.56□□□□□ -0.08
HLA-DOB-208ENST00000475235 DHX37Q8IY37 1157 aaKnown RBP14.56□□□□□ -0.08
HLA-DOB-208ENST00000475235 GREM2Q9H772 168 aa14.56□□□□□ -0.08
HLA-DOB-208ENST00000475235 POLLQ9UGP5 575 aa14.56□□□□□ -0.08
HLA-DOB-208ENST00000475235 DUOX1Q9NRD9 1551 aa14.56□□□□□ -0.08
HLA-DOB-208ENST00000475235 POTEIP0CG38 1075 aa14.56□□□□□ -0.08
HLA-DOB-208ENST00000475235 POTEJP0CG39 1038 aa14.56□□□□□ -0.08
HLA-DOB-208ENST00000475235 DIEXFQ68CQ4 756 aaKnown RBP14.56□□□□□ -0.08
HLA-DOB-208ENST00000475235 ZC3H12CQ9C0D7 883 aaKnown RBP14.56□□□□□ -0.08
HLA-DOB-208ENST00000475235 BSDC1Q9NW68 430 aaPredicted RBP14.56□□□□□ -0.08
HLA-DOB-208ENST00000475235 GGA1Q9UJY5 639 aa14.56□□□□□ -0.08
HLA-DOB-208ENST00000475235 ZBTB12Q9Y330 459 aaPredicted RBP14.56□□□□□ -0.08
HLA-DOB-208ENST00000475235 XDHP47989 1333 aa14.55□□□□□ -0.08
HLA-DOB-208ENST00000475235 SCN4AP35499 1836 aa14.55□□□□□ -0.08
HLA-DOB-208ENST00000475235 ALDH1L1O75891 902 aa14.55□□□□□ -0.08
HLA-DOB-208ENST00000475235 UFL1O94874 794 aa14.55□□□□□ -0.08
HLA-DOB-208ENST00000475235 CSF1RP07333 972 aa14.55□□□□□ -0.08
HLA-DOB-208ENST00000475235 CT47B1P0C2W7 299 aaPredicted RBP14.55□□□□□ -0.08
HLA-DOB-208ENST00000475235 IGHMBP2P38935 993 aaKnown RBP14.55□□□□□ -0.08
HLA-DOB-208ENST00000475235 MRPL50Q8N5N7 158 aaKnown RBP14.55□□□□□ -0.08
HLA-DOB-208ENST00000475235 SRCIN1Q9C0H9 1055 aa14.55□□□□□ -0.08
HLA-DOB-208ENST00000475235 CLEC11AQ9Y240 323 aa14.55□□□□□ -0.08
HLA-DOB-208ENST00000475235 PTPRCP08575 1304 aa14.55□□□□□ -0.08
HLA-DOB-208ENST00000475235 GRM8O00222 908 aa14.54□□□□□ -0.08
HLA-DOB-208ENST00000475235 RIMBP2O15034 1052 aa14.54□□□□□ -0.08
HLA-DOB-208ENST00000475235 ATP2B4P23634 1241 aa14.54□□□□□ -0.08
HLA-DOB-208ENST00000475235 PLCB2Q00722 1185 aa14.54□□□□□ -0.08
HLA-DOB-208ENST00000475235 ALDH1L2Q3SY69 923 aa14.54□□□□□ -0.08
HLA-DOB-208ENST00000475235 SLC4A10Q6U841 1118 aa14.54□□□□□ -0.08
HLA-DOB-208ENST00000475235 USP50Q70EL3 339 aaPredicted RBP14.54□□□□□ -0.08
HLA-DOB-208ENST00000475235 TRMT2AQ8IZ69 625 aaKnown RBP14.54□□□□□ -0.08
HLA-DOB-208ENST00000475235 CDCA7LQ96GN5 454 aa14.54□□□□□ -0.08
HLA-DOB-208ENST00000475235 GPRC5DQ9NZD1 345 aa14.54□□□□□ -0.08
HLA-DOB-208ENST00000475235 COL4A1P02462 1669 aa14.54□□□□□ -0.08
HLA-DOB-208ENST00000475235 CEP350Q5VT06 3117 aa14.53□□□□□ -0.08
HLA-DOB-208ENST00000475235 YDJCA8MPS7 323 aa14.53□□□□□ -0.08
HLA-DOB-208ENST00000475235 G3V3G9 751 aa14.53□□□□□ -0.08
HLA-DOB-208ENST00000475235 RAD17O75943 681 aa14.53□□□□□ -0.08
HLA-DOB-208ENST00000475235 ITGA6P23229 1130 aa14.53□□□□□ -0.08
HLA-DOB-208ENST00000475235 EPS15P42566 896 aa14.53□□□□□ -0.08
HLA-DOB-208ENST00000475235 DCAF8Q5TAQ9 597 aa14.53□□□□□ -0.08
HLA-DOB-208ENST00000475235 BCL2L13Q9BXK5 485 aa14.53□□□□□ -0.08
HLA-DOB-208ENST00000475235 ADARB2Q9NS39 739 aaKnown RBP14.53□□□□□ -0.08
HLA-DOB-208ENST00000475235 C9orf78Q9NZ63 289 aaPredicted RBP14.53□□□□□ -0.08
HLA-DOB-208ENST00000475235 ECE2O60344 883 aa14.52□□□□□ -0.08
HLA-DOB-208ENST00000475235 GMPSP49915 693 aaPredicted RBP14.52□□□□□ -0.08
HLA-DOB-208ENST00000475235 RBM10P98175 930 aaKnown RBP14.52□□□□□ -0.08
HLA-DOB-208ENST00000475235 FAM161AQ3B820 660 aa14.52□□□□□ -0.08
HLA-DOB-208ENST00000475235 DNAJC5GQ8N7S2 189 aa14.52□□□□□ -0.08
HLA-DOB-208ENST00000475235 SSH1Q8WYL5 1049 aa14.52□□□□□ -0.08
HLA-DOB-208ENST00000475235 MPHOSPH8Q99549 860 aa14.52□□□□□ -0.08
HLA-DOB-208ENST00000475235 DBNDD1Q9H9R9 158 aa14.52□□□□□ -0.08
HLA-DOB-208ENST00000475235 MINPP1Q9UNW1 487 aa14.52□□□□□ -0.08
HLA-DOB-208ENST00000475235 ANKRD18BA2A2Z9 1011 aa14.51□□□□□ -0.09
HLA-DOB-208ENST00000475235 CACNA1FO60840 1977 aa14.51□□□□□ -0.09
HLA-DOB-208ENST00000475235 RPS12P25398 132 aaKnown RBP14.51□□□□□ -0.09
HLA-DOB-208ENST00000475235 HTRA3P83110 453 aa14.51□□□□□ -0.09
HLA-DOB-208ENST00000475235 FOXO4P98177 505 aa14.51□□□□□ -0.09
HLA-DOB-208ENST00000475235 IFIT5Q13325 482 aaKnown RBP14.51□□□□□ -0.09
HLA-DOB-208ENST00000475235 DOK7Q18PE1 504 aa14.51□□□□□ -0.09
HLA-DOB-208ENST00000475235 CNTROBQ8N137 903 aa14.51□□□□□ -0.09
HLA-DOB-208ENST00000475235 DPF2Q92785 391 aa14.51□□□□□ -0.09
HLA-DOB-208ENST00000475235 KLRG1Q96E93 195 aa14.51□□□□□ -0.09
HLA-DOB-208ENST00000475235 NAP1L5Q96NT1 182 aaPredicted RBP14.51□□□□□ -0.09
HLA-DOB-208ENST00000475235 GPR101Q96P66 508 aaPredicted RBP14.51□□□□□ -0.09
HLA-DOB-208ENST00000475235 ANKRD2Q9GZV1 360 aa14.51□□□□□ -0.09
HLA-DOB-208ENST00000475235 CREBZFQ9NS37 354 aa14.51□□□□□ -0.09
HLA-DOB-208ENST00000475235 PASKQ96RG2 1323 aa14.51□□□□□ -0.09
HLA-DOB-208ENST00000475235 LTBP1Q14766 1721 aa14.5□□□□□ -0.09
HLA-DOB-208ENST00000475235 PSMD14O00487 310 aa14.5□□□□□ -0.09
HLA-DOB-208ENST00000475235 ITGBL1O95965 494 aaPredicted RBP14.5□□□□□ -0.09
HLA-DOB-208ENST00000475235 TAF1P21675 1872 aa14.5□□□□□ -0.09
HLA-DOB-208ENST00000475235 MAP1SQ66K74 1059 aaPredicted RBP14.5□□□□□ -0.09
HLA-DOB-208ENST00000475235 MIER1Q8N108 512 aa14.5□□□□□ -0.09
HLA-DOB-208ENST00000475235 SMC4Q9NTJ3 1288 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms