RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 TSKSQ9UJT2 592 aa32.23■■■□□ 2.75
TMEM54-205ENST00000475208 RPS12P25398 132 aaKnown RBP32.22■■■□□ 2.75
TMEM54-205ENST00000475208 SEC31BQ9NQW1 1179 aa32.22■■■□□ 2.75
TMEM54-205ENST00000475208 KCNQ5Q9NR82 932 aa32.22■■■□□ 2.75
TMEM54-205ENST00000475208 EGFRP00533 1210 aa32.21■■■□□ 2.75
TMEM54-205ENST00000475208 HSP90B1P14625 803 aaKnown RBP32.21■■■□□ 2.75
TMEM54-205ENST00000475208 PCCAP05165 728 aaPredicted RBP32.19■■■□□ 2.74
TMEM54-205ENST00000475208 DLK2Q6UY11 383 aa32.19■■■□□ 2.74
TMEM54-205ENST00000475208 CCDC191Q8NCU4 936 aa32.19■■■□□ 2.74
TMEM54-205ENST00000475208 ZC3H12CQ9C0D7 883 aaKnown RBP32.19■■■□□ 2.74
TMEM54-205ENST00000475208 PODXL2Q9NZ53 605 aa32.19■■■□□ 2.74
TMEM54-205ENST00000475208 UFL1O94874 794 aa32.18■■■□□ 2.74
TMEM54-205ENST00000475208 BRPF1P55201 1214 aaPredicted RBP32.18■■■□□ 2.74
TMEM54-205ENST00000475208 CCDC152Q4G0S7 254 aa32.18■■■□□ 2.74
TMEM54-205ENST00000475208 RBM26Q5T8P6 1007 aaKnown RBP32.18■■■□□ 2.74
TMEM54-205ENST00000475208 KRT26Q7Z3Y9 468 aa32.18■■■□□ 2.74
TMEM54-205ENST00000475208 C8orf58Q8NAV2 365 aa32.18■■■□□ 2.74
TMEM54-205ENST00000475208 CA12O43570 354 aa32.17■■■□□ 2.74
TMEM54-205ENST00000475208 CWC25Q9NXE8 425 aaPredicted RBP32.17■■■□□ 2.74
TMEM54-205ENST00000475208 ANKIB1Q9P2G1 1089 aa32.17■■■□□ 2.74
TMEM54-205ENST00000475208 SCN9AQ15858 1988 aa32.16■■■□□ 2.74
TMEM54-205ENST00000475208 PDE8AO60658 829 aa32.16■■■□□ 2.74
TMEM54-205ENST00000475208 HUNKP57058 714 aa32.16■■■□□ 2.74
TMEM54-205ENST00000475208 JARID2Q92833 1246 aaPredicted RBP32.16■■■□□ 2.74
TMEM54-205ENST00000475208 GGA1Q9UJY5 639 aa32.16■■■□□ 2.74
TMEM54-205ENST00000475208 CCDC85AQ96PX6 553 aaPredicted RBP32.15■■■□□ 2.74
TMEM54-205ENST00000475208 METTL22Q9BUU2 404 aaPredicted RBP32.15■■■□□ 2.74
TMEM54-205ENST00000475208 ADM5C9JUS6 153 aa32.14■■■□□ 2.74
TMEM54-205ENST00000475208 G3V3G9 751 aa32.14■■■□□ 2.74
TMEM54-205ENST00000475208 DDX58O95786 925 aaKnown RBP32.14■■■□□ 2.74
TMEM54-205ENST00000475208 KIF4BQ2VIQ3 1234 aa32.14■■■□□ 2.74
TMEM54-205ENST00000475208 DCAF8Q5TAQ9 597 aa32.14■■■□□ 2.74
TMEM54-205ENST00000475208 CCDC30Q5VVM6 783 aa32.14■■■□□ 2.74
TMEM54-205ENST00000475208 DCPSQ96C86 337 aaKnown RBP32.14■■■□□ 2.74
TMEM54-205ENST00000475208 VIL1P09327 827 aaKnown RBP32.13■■■□□ 2.73
TMEM54-205ENST00000475208 NOGQ13253 232 aa32.13■■■□□ 2.73
TMEM54-205ENST00000475208 CHMP4AQ9BY43 222 aa32.11■■■□□ 2.73
TMEM54-205ENST00000475208 GBA2Q9HCG7 927 aaPredicted RBP32.11■■■□□ 2.73
TMEM54-205ENST00000475208 ANKRD18AQ8IVF6 992 aa32.1■■■□□ 2.73
TMEM54-205ENST00000475208 TSPYL6Q8N831 410 aa32.1■■■□□ 2.73
TMEM54-205ENST00000475208 ZIC5Q96T25 663 aa32.1■■■□□ 2.73
TMEM54-205ENST00000475208 GGA3Q9NZ52 723 aa32.1■■■□□ 2.73
TMEM54-205ENST00000475208 MAP3K2Q9Y2U5 619 aa32.1■■■□□ 2.73
TMEM54-205ENST00000475208 POLR2AP24928 1970 aaKnown RBP32.1■■■□□ 2.73
TMEM54-205ENST00000475208 XDHP47989 1333 aa32.08■■■□□ 2.73
TMEM54-205ENST00000475208 RGMBQ6NW40 437 aa32.08■■■□□ 2.73
TMEM54-205ENST00000475208 C2orf69Q8N8R5 385 aa32.08■■■□□ 2.73
TMEM54-205ENST00000475208 ZNF609O15014 1411 aa32.08■■■□□ 2.73
TMEM54-205ENST00000475208 ASTN2O75129 1339 aaPredicted RBP32.06■■■□□ 2.72
TMEM54-205ENST00000475208 CCDC85CA6NKD9 419 aa32.06■■■□□ 2.72
TMEM54-205ENST00000475208 CTSWP56202 376 aa32.06■■■□□ 2.72
TMEM54-205ENST00000475208 RSBN1LQ6PCB5 846 aaPredicted RBP32.06■■■□□ 2.72
TMEM54-205ENST00000475208 SULF1Q8IWU6 871 aa32.06■■■□□ 2.72
TMEM54-205ENST00000475208 IGKV5-2P06315 115 aa32.05■■■□□ 2.72
TMEM54-205ENST00000475208 KSR2Q6VAB6 950 aa32.05■■■□□ 2.72
TMEM54-205ENST00000475208 AGBL3Q8NEM8 1001 aa32.05■■■□□ 2.72
TMEM54-205ENST00000475208 TSR2Q969E8 191 aaKnown RBP32.05■■■□□ 2.72
TMEM54-205ENST00000475208 PSME4Q14997 1843 aa32.05■■■□□ 2.72
TMEM54-205ENST00000475208 PI4KAP2A4QPH2 592 aa32.04■■■□□ 2.72
TMEM54-205ENST00000475208 FAM155AB1AL88 458 aaPredicted RBP32.04■■■□□ 2.72
TMEM54-205ENST00000475208 ATP2B4P23634 1241 aa32.04■■■□□ 2.72
TMEM54-205ENST00000475208 ZNF280AP59817 542 aaPredicted RBP32.04■■■□□ 2.72
TMEM54-205ENST00000475208 PI4KAP1Q8N8J0 262 aa32.04■■■□□ 2.72
TMEM54-205ENST00000475208 CDC5LQ99459 802 aaKnown RBP32.04■■■□□ 2.72
TMEM54-205ENST00000475208 CASP8AP2Q9UKL3 1982 aa32.03■■■□□ 2.72
TMEM54-205ENST00000475208 CDCA5Q96FF9 252 aa32.02■■■□□ 2.72
TMEM54-205ENST00000475208 STK31Q9BXU1 1019 aa32.02■■■□□ 2.72
TMEM54-205ENST00000475208 ZNF157P51786 506 aaPredicted RBP32.01■■■□□ 2.71
TMEM54-205ENST00000475208 NEXNQ0ZGT2 675 aa32.01■■■□□ 2.71
TMEM54-205ENST00000475208 FAM161AQ3B820 660 aa32.01■■■□□ 2.71
TMEM54-205ENST00000475208 ANGEL2Q5VTE6 544 aaKnown RBP32.01■■■□□ 2.71
TMEM54-205ENST00000475208 CCDC102AQ96A19 550 aa32.01■■■□□ 2.71
TMEM54-205ENST00000475208 MCOLN1Q9GZU1 580 aa32.01■■■□□ 2.71
TMEM54-205ENST00000475208 SCARF1Q14162 830 aa32■■■□□ 2.71
TMEM54-205ENST00000475208 TTLL11Q8NHH1 800 aa32■■■□□ 2.71
TMEM54-205ENST00000475208 GMLQ99445 158 aa32■■■□□ 2.71
TMEM54-205ENST00000475208 GREM2Q9H772 168 aa32■■■□□ 2.71
TMEM54-205ENST00000475208 MYH3P11055 1940 aa31.99■■■□□ 2.71
TMEM54-205ENST00000475208 SPEF2Q9C093 1822 aa31.99■■■□□ 2.71
TMEM54-205ENST00000475208 CWF19L2Q2TBE0 894 aaKnown RBP31.99■■■□□ 2.71
TMEM54-205ENST00000475208 PODNQ7Z5L7 613 aa31.99■■■□□ 2.71
TMEM54-205ENST00000475208 MED23Q9ULK4 1368 aa31.98■■■□□ 2.71
TMEM54-205ENST00000475208 USP17L3A6NCW0 530 aa31.98■■■□□ 2.71
TMEM54-205ENST00000475208 USP17L4A6NCW7 530 aa31.98■■■□□ 2.71
TMEM54-205ENST00000475208 WTIPA6NIX2 430 aaPredicted RBP31.98■■■□□ 2.71
TMEM54-205ENST00000475208 USP17L8P0C7I0 530 aa31.98■■■□□ 2.71
TMEM54-205ENST00000475208 KIF23Q02241 960 aaPredicted RBP31.98■■■□□ 2.71
TMEM54-205ENST00000475208 USP17L1Q7RTZ2 530 aa31.98■■■□□ 2.71
TMEM54-205ENST00000475208 NEURL1BA8MQ27 555 aa31.97■■■□□ 2.71
TMEM54-205ENST00000475208 MYOZ2Q9NPC6 264 aa31.97■■■□□ 2.71
TMEM54-205ENST00000475208 BSDC1Q9NW68 430 aaPredicted RBP31.97■■■□□ 2.71
TMEM54-205ENST00000475208 MINPP1Q9UNW1 487 aa31.97■■■□□ 2.71
TMEM54-205ENST00000475208 SLC10A3P09131 477 aa31.96■■■□□ 2.71
TMEM54-205ENST00000475208 DGKZQ13574 1117 aa31.96■■■□□ 2.71
TMEM54-205ENST00000475208 TWISTNBQ3B726 338 aaPredicted RBP31.96■■■□□ 2.71
TMEM54-205ENST00000475208 CCDC184Q52MB2 194 aa31.96■■■□□ 2.71
TMEM54-205ENST00000475208 CCDC27Q2M243 656 aa31.95■■■□□ 2.71
TMEM54-205ENST00000475208 G2E3Q7L622 706 aa31.95■■■□□ 2.71
TMEM54-205ENST00000475208 SAGE1Q9NXZ1 904 aa31.95■■■□□ 2.71
TMEM54-205ENST00000475208 UBE3BQ7Z3V4 1068 aa31.94■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms