RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 FAM89AQ96GI7 184 aa20.8■□□□□ 0.92
ITGB1-211ENST00000475184 EYA3Q99504 573 aa20.8■□□□□ 0.92
ITGB1-211ENST00000475184 GGA3Q9NZ52 723 aa20.8■□□□□ 0.92
ITGB1-211ENST00000475184 CHPF2Q9P2E5 772 aa20.8■□□□□ 0.92
ITGB1-211ENST00000475184 PLBD2Q8NHP8 589 aa20.79■□□□□ 0.92
ITGB1-211ENST00000475184 PAPPA2Q9BXP8 1791 aa20.78■□□□□ 0.92
ITGB1-211ENST00000475184 TMPOP42166 694 aaKnown RBP20.78■□□□□ 0.92
ITGB1-211ENST00000475184 KRT24Q2M2I5 525 aa20.78■□□□□ 0.92
ITGB1-211ENST00000475184 TBC1D16Q8TBP0 767 aa20.78■□□□□ 0.92
ITGB1-211ENST00000475184 CSRNP1Q96S65 589 aa20.78■□□□□ 0.92
ITGB1-211ENST00000475184 ISCA1Q9BUE6 129 aa20.78■□□□□ 0.92
ITGB1-211ENST00000475184 VIL1P09327 827 aaKnown RBP20.77■□□□□ 0.92
ITGB1-211ENST00000475184 ANKRD13DQ6ZTN6 518 aa20.77■□□□□ 0.92
ITGB1-211ENST00000475184 CDCA5Q96FF9 252 aa20.77■□□□□ 0.92
ITGB1-211ENST00000475184 ASTN2O75129 1339 aaPredicted RBP20.77■□□□□ 0.91
ITGB1-211ENST00000475184 ATP5J2-PTCD1G3V325 749 aa20.76■□□□□ 0.91
ITGB1-211ENST00000475184 CTU1Q7Z7A3 348 aaKnown RBP20.76■□□□□ 0.91
ITGB1-211ENST00000475184 ZC3H12CQ9C0D7 883 aaKnown RBP20.76■□□□□ 0.91
ITGB1-211ENST00000475184 RPS8P62241 208 aaKnown RBP20.75■□□□□ 0.91
ITGB1-211ENST00000475184 RTL5Q5HYW3 569 aaPredicted RBP20.75■□□□□ 0.91
ITGB1-211ENST00000475184 HDGFL1Q5TGJ6 251 aa20.75■□□□□ 0.91
ITGB1-211ENST00000475184 ZNF609O15014 1411 aa20.75■□□□□ 0.91
ITGB1-211ENST00000475184 CHL1O00533 1208 aa20.74■□□□□ 0.91
ITGB1-211ENST00000475184 IRS4O14654 1257 aaPredicted RBP20.74■□□□□ 0.91
ITGB1-211ENST00000475184 RASAL3Q86YV0 1011 aa20.74■□□□□ 0.91
ITGB1-211ENST00000475184 REM2Q8IYK8 340 aaPredicted RBP20.74■□□□□ 0.91
ITGB1-211ENST00000475184 PODXL2Q9NZ53 605 aa20.74■□□□□ 0.91
ITGB1-211ENST00000475184 G3V3G9 751 aa20.73■□□□□ 0.91
ITGB1-211ENST00000475184 UFL1O94874 794 aa20.73■□□□□ 0.91
ITGB1-211ENST00000475184 ZNF280AP59817 542 aaPredicted RBP20.73■□□□□ 0.91
ITGB1-211ENST00000475184 DCAF8Q5TAQ9 597 aa20.73■□□□□ 0.91
ITGB1-211ENST00000475184 ANGEL2Q5VTE6 544 aaKnown RBP20.73■□□□□ 0.91
ITGB1-211ENST00000475184 DBF4Q9UBU7 674 aaPredicted RBP20.73■□□□□ 0.91
ITGB1-211ENST00000475184 HOXB7P09629 217 aa20.72■□□□□ 0.91
ITGB1-211ENST00000475184 ANKIB1Q9P2G1 1089 aa20.72■□□□□ 0.91
ITGB1-211ENST00000475184 LAS1LQ9Y4W2 734 aaKnown RBP20.72■□□□□ 0.91
ITGB1-211ENST00000475184 FKBP1BP68106 108 aa20.71■□□□□ 0.91
ITGB1-211ENST00000475184 TRIM28Q13263 835 aaKnown RBP20.71■□□□□ 0.91
ITGB1-211ENST00000475184 SCARF1Q14162 830 aa20.71■□□□□ 0.91
ITGB1-211ENST00000475184 NEUROD2Q15784 382 aa20.71■□□□□ 0.91
ITGB1-211ENST00000475184 PRPF38BQ5VTL8 546 aaKnown RBP20.71■□□□□ 0.91
ITGB1-211ENST00000475184 RSBN1LQ6PCB5 846 aaPredicted RBP20.71■□□□□ 0.91
ITGB1-211ENST00000475184 AGBL3Q8NEM8 1001 aa20.71■□□□□ 0.91
ITGB1-211ENST00000475184 GGA1Q9UJY5 639 aa20.71■□□□□ 0.91
ITGB1-211ENST00000475184 HYPKQ9NX55 129 aa20.7■□□□□ 0.9
ITGB1-211ENST00000475184 HPS5Q9UPZ3 1129 aa20.7■□□□□ 0.9
ITGB1-211ENST00000475184 SPEF2Q9C093 1822 aa20.69■□□□□ 0.9
ITGB1-211ENST00000475184 MYH3P11055 1940 aa20.69■□□□□ 0.9
ITGB1-211ENST00000475184 SEC31BQ9NQW1 1179 aa20.69■□□□□ 0.9
ITGB1-211ENST00000475184 PITPNM2Q9BZ72 1349 aa20.69■□□□□ 0.9
ITGB1-211ENST00000475184 ZBTB38Q8NAP3 1195 aaPredicted RBP20.68■□□□□ 0.9
ITGB1-211ENST00000475184 MYOZ2Q9NPC6 264 aa20.68■□□□□ 0.9
ITGB1-211ENST00000475184 ZNF646O15015 1829 aaPredicted RBP20.68■□□□□ 0.9
ITGB1-211ENST00000475184 USP17L8P0C7I0 530 aa20.67■□□□□ 0.9
ITGB1-211ENST00000475184 HSP90B1P14625 803 aaKnown RBP20.67■□□□□ 0.9
ITGB1-211ENST00000475184 PKN2Q16513 984 aaKnown RBP20.67■□□□□ 0.9
ITGB1-211ENST00000475184 CCDC146Q8IYE0 955 aa20.67■□□□□ 0.9
ITGB1-211ENST00000475184 GMLQ99445 158 aa20.67■□□□□ 0.9
ITGB1-211ENST00000475184 TRIM35Q9UPQ4 493 aa20.67■□□□□ 0.9
ITGB1-211ENST00000475184 HDAC9Q9UKV0 1011 aa20.66■□□□□ 0.9
ITGB1-211ENST00000475184 CCDC152Q4G0S7 254 aa20.65■□□□□ 0.9
ITGB1-211ENST00000475184 DUSP27Q5VZP5 1158 aa20.65■□□□□ 0.9
ITGB1-211ENST00000475184 MOB2Q70IA6 237 aa20.65■□□□□ 0.9
ITGB1-211ENST00000475184 RIC3Q7Z5B4 369 aa20.65■□□□□ 0.9
ITGB1-211ENST00000475184 ZNF296Q8WUU4 475 aaPredicted RBP20.65■□□□□ 0.9
ITGB1-211ENST00000475184 HTTP42858 3142 aa20.64■□□□□ 0.9
ITGB1-211ENST00000475184 XDHP47989 1333 aa20.64■□□□□ 0.89
ITGB1-211ENST00000475184 USP17L3A6NCW0 530 aa20.64■□□□□ 0.89
ITGB1-211ENST00000475184 USP17L4A6NCW7 530 aa20.64■□□□□ 0.89
ITGB1-211ENST00000475184 GOLGA2Q08379 1002 aa20.64■□□□□ 0.89
ITGB1-211ENST00000475184 USP17L1Q7RTZ2 530 aa20.64■□□□□ 0.89
ITGB1-211ENST00000475184 SCAF8Q9UPN6 1271 aaKnown RBP20.64■□□□□ 0.89
ITGB1-211ENST00000475184 MKI67P46013 3256 aaKnown RBP20.64■□□□□ 0.89
ITGB1-211ENST00000475184 UBE2Q2LH0YL09 131 aa20.63■□□□□ 0.89
ITGB1-211ENST00000475184 TBC1D8O95759 1140 aa20.63■□□□□ 0.89
ITGB1-211ENST00000475184 RALBP1Q15311 655 aa20.63■□□□□ 0.89
ITGB1-211ENST00000475184 CENPFP49454 3210 aa20.62■□□□□ 0.89
ITGB1-211ENST00000475184 PDE8AO60658 829 aa20.62■□□□□ 0.89
ITGB1-211ENST00000475184 PODNQ7Z5L7 613 aa20.62■□□□□ 0.89
ITGB1-211ENST00000475184 CCDC85AQ96PX6 553 aaPredicted RBP20.62■□□□□ 0.89
ITGB1-211ENST00000475184 KIAA0100Q14667 2235 aaKnown RBP20.61■□□□□ 0.89
ITGB1-211ENST00000475184 PCCAP05165 728 aaPredicted RBP20.61■□□□□ 0.89
ITGB1-211ENST00000475184 TTLL12Q14166 644 aaPredicted RBP20.61■□□□□ 0.89
ITGB1-211ENST00000475184 PRAMEF18Q5VWM3 479 aa20.61■□□□□ 0.89
ITGB1-211ENST00000475184 ANKRD18AQ8IVF6 992 aa20.61■□□□□ 0.89
ITGB1-211ENST00000475184 CCDC191Q8NCU4 936 aa20.61■□□□□ 0.89
ITGB1-211ENST00000475184 RUNDC1Q96C34 613 aa20.61■□□□□ 0.89
ITGB1-211ENST00000475184 MYD88Q99836 296 aa20.61■□□□□ 0.89
ITGB1-211ENST00000475184 ATP2B4P23634 1241 aa20.6■□□□□ 0.89
ITGB1-211ENST00000475184 TM4SF4P48230 202 aa20.6■□□□□ 0.89
ITGB1-211ENST00000475184 NBPF9Q3BBW0 867 aa20.6■□□□□ 0.89
ITGB1-211ENST00000475184 NOM1Q5C9Z4 860 aaKnown RBP20.6■□□□□ 0.89
ITGB1-211ENST00000475184 GPR25O00155 361 aa20.59■□□□□ 0.89
ITGB1-211ENST00000475184 FBXO46Q6PJ61 603 aaPredicted RBP20.59■□□□□ 0.89
ITGB1-211ENST00000475184 JARID2Q92833 1246 aaPredicted RBP20.59■□□□□ 0.89
ITGB1-211ENST00000475184 PHAXQ9H814 394 aaKnown RBP20.59■□□□□ 0.89
ITGB1-211ENST00000475184 MBIPQ9NS73 344 aa20.59■□□□□ 0.89
ITGB1-211ENST00000475184 CWC25Q9NXE8 425 aaPredicted RBP20.59■□□□□ 0.89
ITGB1-211ENST00000475184 MED23Q9ULK4 1368 aa20.59■□□□□ 0.89
ITGB1-211ENST00000475184 NF2P35240 595 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms