RNA–Protein interactions for RNA: ENST00000475074.1

IMP4-214, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 2

Gene IMP4, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-214ENST00000475074 ZNF594Q96JF6 807 aaPredicted RBP13.63□□□□□ -0.23
IMP4-214ENST00000475074 SIL1Q9H173 461 aa13.63□□□□□ -0.23
IMP4-214ENST00000475074 COL11A2P13942 1736 aaPredicted RBP13.62□□□□□ -0.23
IMP4-214ENST00000475074 PDE8BO95263 885 aa13.62□□□□□ -0.23
IMP4-214ENST00000475074 LRRC24Q50LG9 513 aa13.62□□□□□ -0.23
IMP4-214ENST00000475074 CC2D2BQ6DHV5 1058 aa13.62□□□□□ -0.23
IMP4-214ENST00000475074 SP8Q8IXZ3 490 aa13.62□□□□□ -0.23
IMP4-214ENST00000475074 VGLL2Q8N8G2 317 aa13.62□□□□□ -0.23
IMP4-214ENST00000475074 PUS3Q9BZE2 481 aaKnown RBP13.62□□□□□ -0.23
IMP4-214ENST00000475074 MINPP1Q9UNW1 487 aa13.62□□□□□ -0.23
IMP4-214ENST00000475074 ZBTB22O15209 634 aa13.61□□□□□ -0.23
IMP4-214ENST00000475074 ATP6V0A2Q9Y487 856 aa13.61□□□□□ -0.23
IMP4-214ENST00000475074 LRRC37AA6NMS7 1700 aa13.61□□□□□ -0.23
IMP4-214ENST00000475074 TFCP2Q12800 502 aa13.6□□□□□ -0.23
IMP4-214ENST00000475074 UBE4AQ14139 1066 aa13.6□□□□□ -0.23
IMP4-214ENST00000475074 METTL24Q5JXM2 366 aa13.6□□□□□ -0.23
IMP4-214ENST00000475074 TMX4Q9H1E5 349 aaPredicted RBP13.6□□□□□ -0.23
IMP4-214ENST00000475074 OSBPL3Q9H4L5 887 aa13.6□□□□□ -0.23
IMP4-214ENST00000475074 KIAA1551Q9HCM1 1747 aa13.6□□□□□ -0.23
IMP4-214ENST00000475074 PODXL2Q9NZ53 605 aa13.6□□□□□ -0.23
IMP4-214ENST00000475074 PPEF1O14829 653 aaPredicted RBP13.59□□□□□ -0.23
IMP4-214ENST00000475074 KCNA3P22001 575 aa13.59□□□□□ -0.23
IMP4-214ENST00000475074 CHRNDQ07001 517 aa13.59□□□□□ -0.23
IMP4-214ENST00000475074 PUM3Q15397 648 aaKnown RBP13.59□□□□□ -0.23
IMP4-214ENST00000475074 TNNI3KQ59H18 835 aa13.59□□□□□ -0.23
IMP4-214ENST00000475074 TTLL6Q8N841 843 aa13.59□□□□□ -0.23
IMP4-214ENST00000475074 STAP2Q9UGK3 403 aa13.59□□□□□ -0.23
IMP4-214ENST00000475074 LEMD3Q9Y2U8 911 aa13.59□□□□□ -0.23
IMP4-214ENST00000475074 FPGT-TNNI3KV9GXZ4 949 aa13.59□□□□□ -0.23
IMP4-214ENST00000475074 XDHP47989 1333 aa13.59□□□□□ -0.23
IMP4-214ENST00000475074 AOX1Q06278 1338 aa13.59□□□□□ -0.23
IMP4-214ENST00000475074 SALL3Q9BXA9 1300 aa13.59□□□□□ -0.23
IMP4-214ENST00000475074 FGFR2P21802 821 aa13.58□□□□□ -0.24
IMP4-214ENST00000475074 SOGA3Q5TF21 947 aa13.58□□□□□ -0.24
IMP4-214ENST00000475074 C15orf52Q6ZUT6 534 aaKnown RBP13.58□□□□□ -0.24
IMP4-214ENST00000475074 LPIN2Q92539 896 aa13.58□□□□□ -0.24
IMP4-214ENST00000475074 ZNF622Q969S3 477 aaKnown RBP eCLIP13.58□□□□□ -0.24
IMP4-214ENST00000475074 EAF2Q96CJ1 260 aaPredicted RBP13.58□□□□□ -0.24
IMP4-214ENST00000475074 GPATCH3Q96I76 525 aa13.58□□□□□ -0.24
IMP4-214ENST00000475074 LNPKQ9C0E8 428 aa13.58□□□□□ -0.24
IMP4-214ENST00000475074 PIM2Q9P1W9 311 aa13.58□□□□□ -0.24
IMP4-214ENST00000475074 TAF1P21675 1872 aa13.58□□□□□ -0.24
IMP4-214ENST00000475074 TTC41PQ6P2S7 1318 aa13.58□□□□□ -0.24
IMP4-214ENST00000475074 A0A1B0GUL6 1792 aa13.58□□□□□ -0.24
IMP4-214ENST00000475074 SPEF2Q9C093 1822 aa13.57□□□□□ -0.24
IMP4-214ENST00000475074 ZNF609O15014 1411 aa13.57□□□□□ -0.24
IMP4-214ENST00000475074 COL4A1P02462 1669 aa13.57□□□□□ -0.24
IMP4-214ENST00000475074 APBB1O00213 710 aa13.57□□□□□ -0.24
IMP4-214ENST00000475074 IFIT2P09913 472 aaKnown RBP13.57□□□□□ -0.24
IMP4-214ENST00000475074 DPEP1P16444 411 aa13.57□□□□□ -0.24
IMP4-214ENST00000475074 CHRNA5P30532 468 aa13.57□□□□□ -0.24
IMP4-214ENST00000475074 ATP2B3Q16720 1220 aa13.57□□□□□ -0.24
IMP4-214ENST00000475074 PRPF40BQ6NWY9 871 aaKnown RBP13.57□□□□□ -0.24
IMP4-214ENST00000475074 C7orf43Q8WVR3 580 aa13.57□□□□□ -0.24
IMP4-214ENST00000475074 IL1RAPL2Q9NP60 686 aa13.57□□□□□ -0.24
IMP4-214ENST00000475074 ARAP2Q8WZ64 1704 aa13.56□□□□□ -0.24
IMP4-214ENST00000475074 A0A1B0GUL7 405 aa13.56□□□□□ -0.24
IMP4-214ENST00000475074 SMARCA5O60264 1052 aaPredicted RBP13.56□□□□□ -0.24
IMP4-214ENST00000475074 IFIT1P09914 478 aaKnown RBP13.56□□□□□ -0.24
IMP4-214ENST00000475074 SLC5A1P13866 664 aa13.56□□□□□ -0.24
IMP4-214ENST00000475074 ATP2B4P23634 1241 aa13.56□□□□□ -0.24
IMP4-214ENST00000475074 AACSQ86V21 672 aa13.56□□□□□ -0.24
IMP4-214ENST00000475074 ZNF512BQ96KM6 892 aaPredicted RBP13.56□□□□□ -0.24
IMP4-214ENST00000475074 BRCA1P38398 1863 aaKnown RBP13.56□□□□□ -0.24
IMP4-214ENST00000475074 LTBP1Q14766 1721 aa13.56□□□□□ -0.24
IMP4-214ENST00000475074 A0A0G2JLW4 131 aa13.55□□□□□ -0.24
IMP4-214ENST00000475074 ERC2O15083 957 aa13.55□□□□□ -0.24
IMP4-214ENST00000475074 MX1P20591 662 aa13.55□□□□□ -0.24
IMP4-214ENST00000475074 PDE4AP27815 886 aa13.55□□□□□ -0.24
IMP4-214ENST00000475074 TICAM2Q86XR7 235 aa13.55□□□□□ -0.24
IMP4-214ENST00000475074 PLEKHM2Q8IWE5 1019 aa13.55□□□□□ -0.24
IMP4-214ENST00000475074 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.55□□□□□ -0.24
IMP4-214ENST00000475074 VPS33BQ9H267 617 aa13.55□□□□□ -0.24
IMP4-214ENST00000475074 ECHDC1Q9NTX5 307 aa13.55□□□□□ -0.24
IMP4-214ENST00000475074 PDE1AP54750 535 aa13.54□□□□□ -0.24
IMP4-214ENST00000475074 TIMM10P62072 90 aa13.54□□□□□ -0.24
IMP4-214ENST00000475074 DALRD3Q5D0E6 543 aaKnown RBP13.54□□□□□ -0.24
IMP4-214ENST00000475074 CCDC158Q5M9N0 1113 aa13.54□□□□□ -0.24
IMP4-214ENST00000475074 RTKN2Q8IZC4 609 aa13.54□□□□□ -0.24
IMP4-214ENST00000475074 RTFDC1Q9BY42 306 aaPredicted RBP13.54□□□□□ -0.24
IMP4-214ENST00000475074 ANKIB1Q9P2G1 1089 aa13.54□□□□□ -0.24
IMP4-214ENST00000475074 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.54□□□□□ -0.24
IMP4-214ENST00000475074 SLX4Q8IY92 1834 aa13.54□□□□□ -0.24
IMP4-214ENST00000475074 ZNF804BA4D1E1 1349 aa13.54□□□□□ -0.24
IMP4-214ENST00000475074 TAF5LO75529 589 aa13.53□□□□□ -0.24
IMP4-214ENST00000475074 GLRX3O76003 335 aaKnown RBP13.53□□□□□ -0.24
IMP4-214ENST00000475074 ATP5JP18859 108 aa13.53□□□□□ -0.24
IMP4-214ENST00000475074 KCNJ4P48050 445 aa13.53□□□□□ -0.24
IMP4-214ENST00000475074 C16orf71Q8IYS4 520 aaPredicted RBP13.53□□□□□ -0.24
IMP4-214ENST00000475074 MPNDQ8N594 471 aa13.53□□□□□ -0.24
IMP4-214ENST00000475074 SUPT20HQ8NEM7 779 aa13.53□□□□□ -0.24
IMP4-214ENST00000475074 XAGE2Q96GT9 111 aa13.53□□□□□ -0.24
IMP4-214ENST00000475074 NEUROD6Q96NK8 337 aa13.53□□□□□ -0.24
IMP4-214ENST00000475074 DBNLQ9UJU6 430 aaKnown RBP13.53□□□□□ -0.24
IMP4-214ENST00000475074 GGA1Q9UJY5 639 aa13.53□□□□□ -0.24
IMP4-214ENST00000475074 NSFL1CQ9UNZ2 370 aaKnown RBP13.53□□□□□ -0.24
IMP4-214ENST00000475074 SNED1Q8TER0 1413 aa13.53□□□□□ -0.24
IMP4-214ENST00000475074 SEMA3EO15041 775 aa13.52□□□□□ -0.25
IMP4-214ENST00000475074 IGSF3O75054 1194 aa13.52□□□□□ -0.25
IMP4-214ENST00000475074 UQCRFS1P1P0C7P4 283 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms