RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 LRRC37AA6NMS7 1700 aa12.07□□□□□ -0.48
PDPN-204ENST00000475043 PCCAP05165 728 aaPredicted RBP12.07□□□□□ -0.48
PDPN-204ENST00000475043 PYGBP11216 843 aa12.07□□□□□ -0.48
PDPN-204ENST00000475043 TMC4Q7Z404 712 aa12.07□□□□□ -0.48
PDPN-204ENST00000475043 GPC2Q8N158 579 aa12.07□□□□□ -0.48
PDPN-204ENST00000475043 CELF1Q92879 486 aaKnown RBP12.07□□□□□ -0.48
PDPN-204ENST00000475043 L3MBTL3Q96JM7 780 aaPredicted RBP12.07□□□□□ -0.48
PDPN-204ENST00000475043 MYH16Q9H6N6 1097 aa12.07□□□□□ -0.48
PDPN-204ENST00000475043 POTEFA5A3E0 1075 aa12.06□□□□□ -0.48
PDPN-204ENST00000475043 VAMP4O75379 141 aa12.06□□□□□ -0.48
PDPN-204ENST00000475043 POTEJP0CG39 1038 aa12.06□□□□□ -0.48
PDPN-204ENST00000475043 HTRA3P83110 453 aa12.06□□□□□ -0.48
PDPN-204ENST00000475043 FKBP5Q13451 457 aaPredicted RBP12.06□□□□□ -0.48
PDPN-204ENST00000475043 CWF19L2Q2TBE0 894 aaKnown RBP12.06□□□□□ -0.48
PDPN-204ENST00000475043 EAPPQ56P03 285 aaPredicted RBP12.06□□□□□ -0.48
PDPN-204ENST00000475043 CCDC85AQ96PX6 553 aaPredicted RBP12.06□□□□□ -0.48
PDPN-204ENST00000475043 TAF1DQ9H5J8 278 aaPredicted RBP12.06□□□□□ -0.48
PDPN-204ENST00000475043 HACL1Q9UJ83 578 aa12.06□□□□□ -0.48
PDPN-204ENST00000475043 NSFL1CQ9UNZ2 370 aaKnown RBP12.06□□□□□ -0.48
PDPN-204ENST00000475043 COL4A1P02462 1669 aa12.06□□□□□ -0.48
PDPN-204ENST00000475043 MYH3P11055 1940 aa12.05□□□□□ -0.48
PDPN-204ENST00000475043 PDE8AO60658 829 aa12.05□□□□□ -0.48
PDPN-204ENST00000475043 IGKV5-2P06315 115 aa12.05□□□□□ -0.48
PDPN-204ENST00000475043 FLIIQ13045 1269 aa12.05□□□□□ -0.48
PDPN-204ENST00000475043 GSE1Q14687 1217 aa12.05□□□□□ -0.48
PDPN-204ENST00000475043 RTFDC1Q9BY42 306 aaPredicted RBP12.05□□□□□ -0.48
PDPN-204ENST00000475043 VPS33BQ9H267 617 aa12.05□□□□□ -0.48
PDPN-204ENST00000475043 CEP350Q5VT06 3117 aa12.04□□□□□ -0.48
PDPN-204ENST00000475043 LMOD1P29536 600 aaPredicted RBP12.04□□□□□ -0.48
PDPN-204ENST00000475043 EPHX2P34913 555 aa12.04□□□□□ -0.48
PDPN-204ENST00000475043 RPS8P62241 208 aaKnown RBP12.04□□□□□ -0.48
PDPN-204ENST00000475043 CCDC152Q4G0S7 254 aa12.04□□□□□ -0.48
PDPN-204ENST00000475043 IFNLR1Q8IU57 520 aaPredicted RBP12.04□□□□□ -0.48
PDPN-204ENST00000475043 SEC31BQ9NQW1 1179 aa12.04□□□□□ -0.48
PDPN-204ENST00000475043 SPEF2Q9C093 1822 aa12.04□□□□□ -0.48
PDPN-204ENST00000475043 NEURL1BA8MQ27 555 aa12.03□□□□□ -0.48
PDPN-204ENST00000475043 C6orf229H3BNL8 230 aa12.03□□□□□ -0.48
PDPN-204ENST00000475043 KIAA2012Q0VF49 1180 aa12.03□□□□□ -0.48
PDPN-204ENST00000475043 UBE3BQ7Z3V4 1068 aa12.03□□□□□ -0.48
PDPN-204ENST00000475043 LDHDQ86WU2 507 aa12.03□□□□□ -0.48
PDPN-204ENST00000475043 ZNRF3Q9ULT6 936 aa12.03□□□□□ -0.48
PDPN-204ENST00000475043 DUOX1Q9NRD9 1551 aa12.03□□□□□ -0.48
PDPN-204ENST00000475043 CDHR2Q9BYE9 1310 aa12.03□□□□□ -0.48
PDPN-204ENST00000475043 RIMBP2O15034 1052 aa12.02□□□□□ -0.49
PDPN-204ENST00000475043 GPSM2P81274 684 aa12.02□□□□□ -0.49
PDPN-204ENST00000475043 CXCL9Q07325 125 aa12.02□□□□□ -0.49
PDPN-204ENST00000475043 WASHC4Q2M389 1173 aa12.02□□□□□ -0.49
PDPN-204ENST00000475043 PNMA8AQ86V59 439 aaPredicted RBP12.02□□□□□ -0.49
PDPN-204ENST00000475043 DNAJC5GQ8N7S2 189 aa12.02□□□□□ -0.49
PDPN-204ENST00000475043 DNAAF4Q8WXU2 420 aa12.02□□□□□ -0.49
PDPN-204ENST00000475043 TMEM106CQ9BVX2 250 aa12.02□□□□□ -0.49
PDPN-204ENST00000475043 ANKIB1Q9P2G1 1089 aa12.02□□□□□ -0.49
PDPN-204ENST00000475043 LTBP1Q14766 1721 aa12.02□□□□□ -0.49
PDPN-204ENST00000475043 RAD17O75943 681 aa12.01□□□□□ -0.49
PDPN-204ENST00000475043 EPS15P42566 896 aa12.01□□□□□ -0.49
PDPN-204ENST00000475043 SCNN1DP51172 638 aa12.01□□□□□ -0.49
PDPN-204ENST00000475043 CTSWP56202 376 aa12.01□□□□□ -0.49
PDPN-204ENST00000475043 GCKRQ14397 625 aa12.01□□□□□ -0.49
PDPN-204ENST00000475043 IER5LQ5T953 404 aa12.01□□□□□ -0.49
PDPN-204ENST00000475043 ANKRD18AQ8IVF6 992 aa12.01□□□□□ -0.49
PDPN-204ENST00000475043 ADAMTSL1Q8N6G6 1762 aa12□□□□□ -0.49
PDPN-204ENST00000475043 F6X3S4 739 aa12□□□□□ -0.49
PDPN-204ENST00000475043 H7C1W4 665 aa12□□□□□ -0.49
PDPN-204ENST00000475043 TNIP1Q15025 636 aa12□□□□□ -0.49
PDPN-204ENST00000475043 CIAPIN1Q6FI81 312 aa12□□□□□ -0.49
PDPN-204ENST00000475043 MAMSTRQ6ZN01 415 aa12□□□□□ -0.49
PDPN-204ENST00000475043 LINS1Q8NG48 757 aa12□□□□□ -0.49
PDPN-204ENST00000475043 TTLL11Q8NHH1 800 aa12□□□□□ -0.49
PDPN-204ENST00000475043 KLRG1Q96E93 195 aa12□□□□□ -0.49
PDPN-204ENST00000475043 EYA3Q99504 573 aa12□□□□□ -0.49
PDPN-204ENST00000475043 BCL2L13Q9BXK5 485 aa12□□□□□ -0.49
PDPN-204ENST00000475043 DBNDD1Q9H9R9 158 aa12□□□□□ -0.49
PDPN-204ENST00000475043 POLLQ9UGP5 575 aa12□□□□□ -0.49
PDPN-204ENST00000475043 ZNF521Q96K83 1311 aa12□□□□□ -0.49
PDPN-204ENST00000475043 G3V3G9 751 aa11.99□□□□□ -0.49
PDPN-204ENST00000475043 UFL1O94874 794 aa11.99□□□□□ -0.49
PDPN-204ENST00000475043 MAP1SQ66K74 1059 aaPredicted RBP11.99□□□□□ -0.49
PDPN-204ENST00000475043 TBC1D16Q8TBP0 767 aa11.99□□□□□ -0.49
PDPN-204ENST00000475043 GPR101Q96P66 508 aaPredicted RBP11.99□□□□□ -0.49
PDPN-204ENST00000475043 CDC5LQ99459 802 aaKnown RBP11.99□□□□□ -0.49
PDPN-204ENST00000475043 ZC3H12CQ9C0D7 883 aaKnown RBP11.99□□□□□ -0.49
PDPN-204ENST00000475043 GREM2Q9H772 168 aa11.99□□□□□ -0.49
PDPN-204ENST00000475043 COLQQ9Y215 455 aaPredicted RBP11.99□□□□□ -0.49
PDPN-204ENST00000475043 YDJCA8MPS7 323 aa11.98□□□□□ -0.49
PDPN-204ENST00000475043 E9PSI1 815 aa11.98□□□□□ -0.49
PDPN-204ENST00000475043 GMPSP49915 693 aaPredicted RBP11.98□□□□□ -0.49
PDPN-204ENST00000475043 DOK7Q18PE1 504 aa11.98□□□□□ -0.49
PDPN-204ENST00000475043 SLC4A10Q6U841 1118 aa11.98□□□□□ -0.49
PDPN-204ENST00000475043 SPOCK2Q92563 424 aa11.98□□□□□ -0.49
PDPN-204ENST00000475043 PODXL2Q9NZ53 605 aa11.98□□□□□ -0.49
PDPN-204ENST00000475043 GPRC5DQ9NZD1 345 aa11.98□□□□□ -0.49
PDPN-204ENST00000475043 GGA1Q9UJY5 639 aa11.98□□□□□ -0.49
PDPN-204ENST00000475043 PCDHB8Q9UN66 801 aa11.98□□□□□ -0.49
PDPN-204ENST00000475043 CCER2I3L3R5 266 aa11.97□□□□□ -0.49
PDPN-204ENST00000475043 ECE2O60344 883 aa11.97□□□□□ -0.49
PDPN-204ENST00000475043 SEC24BO95487 1268 aa11.97□□□□□ -0.49
PDPN-204ENST00000475043 ITGBL1O95965 494 aaPredicted RBP11.97□□□□□ -0.49
PDPN-204ENST00000475043 USP50Q70EL3 339 aaPredicted RBP11.97□□□□□ -0.49
PDPN-204ENST00000475043 CNTROBQ8N137 903 aa11.97□□□□□ -0.49
PDPN-204ENST00000475043 ADARB2Q9NS39 739 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms