RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 RPS12P25398 132 aaKnown RBP20.24■□□□□ 0.83
SRRT-209ENST00000474896 BRPF1P55201 1214 aaPredicted RBP20.24■□□□□ 0.83
SRRT-209ENST00000474896 HUNKP57058 714 aa20.24■□□□□ 0.83
SRRT-209ENST00000474896 GOLGA2Q08379 1002 aa20.24■□□□□ 0.83
SRRT-209ENST00000474896 KRT26Q7Z3Y9 468 aa20.24■□□□□ 0.83
SRRT-209ENST00000474896 ZC3H12CQ9C0D7 883 aaKnown RBP20.24■□□□□ 0.83
SRRT-209ENST00000474896 SEC31BQ9NQW1 1179 aa20.24■□□□□ 0.83
SRRT-209ENST00000474896 POLR2AP24928 1970 aaKnown RBP20.24■□□□□ 0.83
SRRT-209ENST00000474896 COL4A1P02462 1669 aa20.23■□□□□ 0.83
SRRT-209ENST00000474896 DCPSQ96C86 337 aaKnown RBP20.23■□□□□ 0.83
SRRT-209ENST00000474896 ZIC5Q96T25 663 aa20.23■□□□□ 0.83
SRRT-209ENST00000474896 MYD88Q99836 296 aa20.23■□□□□ 0.83
SRRT-209ENST00000474896 RTL9Q8NET4 1388 aa20.22■□□□□ 0.83
SRRT-209ENST00000474896 G3V3G9 751 aa20.22■□□□□ 0.83
SRRT-209ENST00000474896 HSP90B1P14625 803 aaKnown RBP20.22■□□□□ 0.83
SRRT-209ENST00000474896 DCAF8Q5TAQ9 597 aa20.22■□□□□ 0.83
SRRT-209ENST00000474896 JARID2Q92833 1246 aaPredicted RBP20.22■□□□□ 0.83
SRRT-209ENST00000474896 ANKIB1Q9P2G1 1089 aa20.22■□□□□ 0.83
SRRT-209ENST00000474896 APAF1O14727 1248 aa20.21■□□□□ 0.83
SRRT-209ENST00000474896 VIL1P09327 827 aaKnown RBP20.21■□□□□ 0.83
SRRT-209ENST00000474896 NOGQ13253 232 aa20.21■□□□□ 0.83
SRRT-209ENST00000474896 IFT57Q9NWB7 429 aa20.21■□□□□ 0.83
SRRT-209ENST00000474896 PODXL2Q9NZ53 605 aa20.21■□□□□ 0.83
SRRT-209ENST00000474896 CASP8AP2Q9UKL3 1982 aa20.21■□□□□ 0.83
SRRT-209ENST00000474896 ADM5C9JUS6 153 aa20.2■□□□□ 0.82
SRRT-209ENST00000474896 GNAI1P63096 354 aa20.2■□□□□ 0.82
SRRT-209ENST00000474896 FAM161AQ3B820 660 aa20.2■□□□□ 0.82
SRRT-209ENST00000474896 C2orf69Q8N8R5 385 aa20.2■□□□□ 0.82
SRRT-209ENST00000474896 CCDC191Q8NCU4 936 aa20.2■□□□□ 0.82
SRRT-209ENST00000474896 GBA2Q9HCG7 927 aaPredicted RBP20.2■□□□□ 0.82
SRRT-209ENST00000474896 UFL1O94874 794 aa20.19■□□□□ 0.82
SRRT-209ENST00000474896 PCCAP05165 728 aaPredicted RBP20.19■□□□□ 0.82
SRRT-209ENST00000474896 KIF4BQ2VIQ3 1234 aa20.19■□□□□ 0.82
SRRT-209ENST00000474896 CCDC152Q4G0S7 254 aa20.19■□□□□ 0.82
SRRT-209ENST00000474896 RGMBQ6NW40 437 aa20.19■□□□□ 0.82
SRRT-209ENST00000474896 C8orf58Q8NAV2 365 aa20.19■□□□□ 0.82
SRRT-209ENST00000474896 CCDC85AQ96PX6 553 aaPredicted RBP20.19■□□□□ 0.82
SRRT-209ENST00000474896 GGA1Q9UJY5 639 aa20.19■□□□□ 0.82
SRRT-209ENST00000474896 PDE8AO60658 829 aa20.18■□□□□ 0.82
SRRT-209ENST00000474896 CALD1Q05682 793 aaKnown RBP20.18■□□□□ 0.82
SRRT-209ENST00000474896 MCOLN1Q9GZU1 580 aa20.18■□□□□ 0.82
SRRT-209ENST00000474896 CWC25Q9NXE8 425 aaPredicted RBP20.18■□□□□ 0.82
SRRT-209ENST00000474896 METTL22Q9BUU2 404 aaPredicted RBP20.17■□□□□ 0.82
SRRT-209ENST00000474896 PRKRIP1Q9H875 184 aaPredicted RBP20.17■□□□□ 0.82
SRRT-209ENST00000474896 SCN9AQ15858 1988 aa20.16■□□□□ 0.82
SRRT-209ENST00000474896 FAM155AB1AL88 458 aaPredicted RBP20.16■□□□□ 0.82
SRRT-209ENST00000474896 ZNF157P51786 506 aaPredicted RBP20.16■□□□□ 0.82
SRRT-209ENST00000474896 SULF1Q8IWU6 871 aa20.16■□□□□ 0.82
SRRT-209ENST00000474896 CCDC102AQ96A19 550 aa20.16■□□□□ 0.82
SRRT-209ENST00000474896 ASTN2O75129 1339 aaPredicted RBP20.16■□□□□ 0.82
SRRT-209ENST00000474896 DDX58O95786 925 aaKnown RBP20.15■□□□□ 0.82
SRRT-209ENST00000474896 KIF23Q02241 960 aaPredicted RBP20.15■□□□□ 0.82
SRRT-209ENST00000474896 DGKZQ13574 1117 aa20.15■□□□□ 0.82
SRRT-209ENST00000474896 CCDC30Q5VVM6 783 aa20.15■□□□□ 0.82
SRRT-209ENST00000474896 RSBN1LQ6PCB5 846 aaPredicted RBP20.15■□□□□ 0.82
SRRT-209ENST00000474896 ANKRD18AQ8IVF6 992 aa20.15■□□□□ 0.82
SRRT-209ENST00000474896 GGA3Q9NZ52 723 aa20.15■□□□□ 0.82
SRRT-209ENST00000474896 RGS19P49795 217 aa20.14■□□□□ 0.81
SRRT-209ENST00000474896 MLLT1Q03111 559 aaPredicted RBP20.14■□□□□ 0.81
SRRT-209ENST00000474896 SCARF1Q14162 830 aa20.14■□□□□ 0.81
SRRT-209ENST00000474896 AGBL3Q8NEM8 1001 aa20.14■□□□□ 0.81
SRRT-209ENST00000474896 MAP3K2Q9Y2U5 619 aa20.14■□□□□ 0.81
SRRT-209ENST00000474896 XDHP47989 1333 aa20.13■□□□□ 0.81
SRRT-209ENST00000474896 ZNF280AP59817 542 aaPredicted RBP20.13■□□□□ 0.81
SRRT-209ENST00000474896 CHMP4AQ9BY43 222 aa20.13■□□□□ 0.81
SRRT-209ENST00000474896 ATP2B4P23634 1241 aa20.12■□□□□ 0.81
SRRT-209ENST00000474896 ANGEL2Q5VTE6 544 aaKnown RBP20.12■□□□□ 0.81
SRRT-209ENST00000474896 TSPYL6Q8N831 410 aa20.12■□□□□ 0.81
SRRT-209ENST00000474896 CDCA5Q96FF9 252 aa20.12■□□□□ 0.81
SRRT-209ENST00000474896 USP17L3A6NCW0 530 aa20.11■□□□□ 0.81
SRRT-209ENST00000474896 USP17L4A6NCW7 530 aa20.11■□□□□ 0.81
SRRT-209ENST00000474896 WTIPA6NIX2 430 aaPredicted RBP20.11■□□□□ 0.81
SRRT-209ENST00000474896 USP17L8P0C7I0 530 aa20.11■□□□□ 0.81
SRRT-209ENST00000474896 KSR2Q6VAB6 950 aa20.11■□□□□ 0.81
SRRT-209ENST00000474896 USP17L1Q7RTZ2 530 aa20.11■□□□□ 0.81
SRRT-209ENST00000474896 GMLQ99445 158 aa20.11■□□□□ 0.81
SRRT-209ENST00000474896 RNF186Q9NXI6 227 aa20.11■□□□□ 0.81
SRRT-209ENST00000474896 PI4KAP2A4QPH2 592 aa20.1■□□□□ 0.81
SRRT-209ENST00000474896 TRPA1O75762 1119 aa20.1■□□□□ 0.81
SRRT-209ENST00000474896 PODNQ7Z5L7 613 aa20.1■□□□□ 0.81
SRRT-209ENST00000474896 PI4KAP1Q8N8J0 262 aa20.1■□□□□ 0.81
SRRT-209ENST00000474896 CDC5LQ99459 802 aaKnown RBP20.1■□□□□ 0.81
SRRT-209ENST00000474896 MYOZ2Q9NPC6 264 aa20.1■□□□□ 0.81
SRRT-209ENST00000474896 SAGE1Q9NXZ1 904 aa20.1■□□□□ 0.81
SRRT-209ENST00000474896 IGKV5-2P06315 115 aa20.09■□□□□ 0.81
SRRT-209ENST00000474896 SLC10A3P09131 477 aa20.09■□□□□ 0.81
SRRT-209ENST00000474896 CTSWP56202 376 aa20.09■□□□□ 0.81
SRRT-209ENST00000474896 TTLL11Q8NHH1 800 aa20.09■□□□□ 0.81
SRRT-209ENST00000474896 CSRNP1Q96S65 589 aa20.09■□□□□ 0.81
SRRT-209ENST00000474896 MINPP1Q9UNW1 487 aa20.09■□□□□ 0.81
SRRT-209ENST00000474896 BSDC1Q9NW68 430 aaPredicted RBP20.08■□□□□ 0.81
SRRT-209ENST00000474896 NEXNQ0ZGT2 675 aa20.07■□□□□ 0.8
SRRT-209ENST00000474896 TSR2Q969E8 191 aaKnown RBP20.07■□□□□ 0.8
SRRT-209ENST00000474896 GREM2Q9H772 168 aa20.07■□□□□ 0.8
SRRT-209ENST00000474896 SCAF8Q9UPN6 1271 aaKnown RBP20.07■□□□□ 0.8
SRRT-209ENST00000474896 ZNF609O15014 1411 aa20.06■□□□□ 0.8
SRRT-209ENST00000474896 CWF19L2Q2TBE0 894 aaKnown RBP20.06■□□□□ 0.8
SRRT-209ENST00000474896 MXD3Q9BW11 206 aa20.06■□□□□ 0.8
SRRT-209ENST00000474896 STK31Q9BXU1 1019 aa20.06■□□□□ 0.8
SRRT-209ENST00000474896 CCT4P50991 539 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms