RNA–Protein interactions for RNA: ENST00000474194.1

RFWD2-207, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 3

Gene RFWD2, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-207ENST00000474194 LMNB1P20700 586 aa31.58■■■□□ 2.65
RFWD2-207ENST00000474194 RFX5P48382 616 aaPredicted RBP31.58■■■□□ 2.65
RFWD2-207ENST00000474194 C9orf131Q5VYM1 1079 aa31.58■■■□□ 2.65
RFWD2-207ENST00000474194 ZNF277Q9NRM2 450 aaPredicted RBP31.58■■■□□ 2.65
RFWD2-207ENST00000474194 MINPP1Q9UNW1 487 aa31.58■■■□□ 2.65
RFWD2-207ENST00000474194 NSFL1CQ9UNZ2 370 aaKnown RBP31.58■■■□□ 2.65
RFWD2-207ENST00000474194 RTFDC1Q9BY42 306 aaPredicted RBP31.57■■■□□ 2.64
RFWD2-207ENST00000474194 MTX1Q13505 466 aa31.56■■■□□ 2.64
RFWD2-207ENST00000474194 KLHDC4Q8TBB5 520 aa31.56■■■□□ 2.64
RFWD2-207ENST00000474194 RNF181Q9P0P0 153 aa31.56■■■□□ 2.64
RFWD2-207ENST00000474194 LDHAL6AQ6ZMR3 332 aa31.55■■■□□ 2.64
RFWD2-207ENST00000474194 PODXL2Q9NZ53 605 aa31.55■■■□□ 2.64
RFWD2-207ENST00000474194 TIAM2Q8IVF5 1701 aa31.55■■■□□ 2.64
RFWD2-207ENST00000474194 PUS3Q9BZE2 481 aaKnown RBP31.54■■■□□ 2.64
RFWD2-207ENST00000474194 ANKIB1Q9P2G1 1089 aa31.54■■■□□ 2.64
RFWD2-207ENST00000474194 XDHP47989 1333 aa31.53■■■□□ 2.64
RFWD2-207ENST00000474194 IARSP41252 1262 aaKnown RBP31.53■■■□□ 2.64
RFWD2-207ENST00000474194 CNNM1Q9NRU3 951 aa31.53■■■□□ 2.64
RFWD2-207ENST00000474194 POLLQ9UGP5 575 aa31.53■■■□□ 2.64
RFWD2-207ENST00000474194 SRGAP3O43295 1099 aa31.52■■■□□ 2.64
RFWD2-207ENST00000474194 PTPN12Q05209 780 aaKnown RBP31.52■■■□□ 2.64
RFWD2-207ENST00000474194 CHRNDQ07001 517 aa31.52■■■□□ 2.64
RFWD2-207ENST00000474194 SUPT20HQ8NEM7 779 aa31.52■■■□□ 2.64
RFWD2-207ENST00000474194 TBC1D16Q8TBP0 767 aa31.52■■■□□ 2.64
RFWD2-207ENST00000474194 ZBTB40Q9NUA8 1239 aa31.52■■■□□ 2.64
RFWD2-207ENST00000474194 COL4A5P29400 1685 aa31.51■■■□□ 2.64
RFWD2-207ENST00000474194 GGA1Q9UJY5 639 aa31.5■■■□□ 2.63
RFWD2-207ENST00000474194 SUPT16HQ9Y5B9 1047 aaKnown RBP31.5■■■□□ 2.63
RFWD2-207ENST00000474194 PNMA6EA0A0J9YXQ4 647 aa31.49■■■□□ 2.63
RFWD2-207ENST00000474194 C6orf229H3BNL8 230 aa31.49■■■□□ 2.63
RFWD2-207ENST00000474194 UFL1O94874 794 aa31.49■■■□□ 2.63
RFWD2-207ENST00000474194 LRRC24Q50LG9 513 aa31.49■■■□□ 2.63
RFWD2-207ENST00000474194 GPR101Q96P66 508 aaPredicted RBP31.49■■■□□ 2.63
RFWD2-207ENST00000474194 ANKRD2Q9GZV1 360 aa31.49■■■□□ 2.63
RFWD2-207ENST00000474194 CHMP4BQ9H444 224 aaKnown RBP31.49■■■□□ 2.63
RFWD2-207ENST00000474194 RIPOR2Q9Y4F9 1068 aa31.49■■■□□ 2.63
RFWD2-207ENST00000474194 WTIPA6NIX2 430 aaPredicted RBP31.48■■■□□ 2.63
RFWD2-207ENST00000474194 PA2G4Q9UQ80 394 aaKnown RBP31.48■■■□□ 2.63
RFWD2-207ENST00000474194 PPIP5K2O43314 1243 aa31.47■■■□□ 2.63
RFWD2-207ENST00000474194 ATP2B4P23634 1241 aa31.47■■■□□ 2.63
RFWD2-207ENST00000474194 ATP8B2P98198 1209 aa31.47■■■□□ 2.63
RFWD2-207ENST00000474194 AOC3Q16853 763 aa31.47■■■□□ 2.63
RFWD2-207ENST00000474194 HELBQ8NG08 1087 aaPredicted RBP31.47■■■□□ 2.63
RFWD2-207ENST00000474194 COPRSQ9NQ92 184 aa31.47■■■□□ 2.63
RFWD2-207ENST00000474194 TAF5LO75529 589 aa31.46■■■□□ 2.63
RFWD2-207ENST00000474194 KIAA2012Q0VF49 1180 aa31.46■■■□□ 2.63
RFWD2-207ENST00000474194 CEP85Q6P2H3 762 aa31.46■■■□□ 2.63
RFWD2-207ENST00000474194 LARGE2Q8N3Y3 721 aa31.46■■■□□ 2.63
RFWD2-207ENST00000474194 VPS33BQ9H267 617 aa31.46■■■□□ 2.63
RFWD2-207ENST00000474194 EYA2O00167 538 aa31.45■■■□□ 2.63
RFWD2-207ENST00000474194 YY1P25490 414 aa31.45■■■□□ 2.63
RFWD2-207ENST00000474194 SIL1Q9H173 461 aa31.45■■■□□ 2.63
RFWD2-207ENST00000474194 POLA2Q14181 598 aa31.44■■■□□ 2.62
RFWD2-207ENST00000474194 SSH3Q8TE77 659 aa31.44■■■□□ 2.62
RFWD2-207ENST00000474194 CRBNQ96SW2 442 aa31.44■■■□□ 2.62
RFWD2-207ENST00000474194 EYA3Q99504 573 aa31.44■■■□□ 2.62
RFWD2-207ENST00000474194 LEMD3Q9Y2U8 911 aa31.44■■■□□ 2.62
RFWD2-207ENST00000474194 MROH5Q6ZUA9 1318 aa31.44■■■□□ 2.62
RFWD2-207ENST00000474194 WASHC4Q2M389 1173 aa31.43■■■□□ 2.62
RFWD2-207ENST00000474194 ATG9AQ7Z3C6 839 aa31.43■■■□□ 2.62
RFWD2-207ENST00000474194 FBXO3Q9UK99 471 aa31.43■■■□□ 2.62
RFWD2-207ENST00000474194 ZC3H4Q9UPT8 1303 aaKnown RBP31.43■■■□□ 2.62
RFWD2-207ENST00000474194 SNAP23O00161 211 aa31.42■■■□□ 2.62
RFWD2-207ENST00000474194 RIMBP2O15034 1052 aa31.42■■■□□ 2.62
RFWD2-207ENST00000474194 ZNF804BA4D1E1 1349 aa31.42■■■□□ 2.62
RFWD2-207ENST00000474194 CIAO1O76071 339 aa31.41■■■□□ 2.62
RFWD2-207ENST00000474194 METTL24Q5JXM2 366 aa31.41■■■□□ 2.62
RFWD2-207ENST00000474194 JDP2Q8WYK2 163 aa31.41■■■□□ 2.62
RFWD2-207ENST00000474194 MED23Q9ULK4 1368 aa31.41■■■□□ 2.62
RFWD2-207ENST00000474194 KCNJ4P48050 445 aa31.4■■■□□ 2.62
RFWD2-207ENST00000474194 NIM1KQ8IY84 436 aa31.4■■■□□ 2.62
RFWD2-207ENST00000474194 VGLL2Q8N8G2 317 aa31.4■■■□□ 2.62
RFWD2-207ENST00000474194 ZC3H12CQ9C0D7 883 aaKnown RBP31.39■■■□□ 2.62
RFWD2-207ENST00000474194 FZD9O00144 591 aa31.38■■■□□ 2.61
RFWD2-207ENST00000474194 KLRK1P26718 216 aa31.38■■■□□ 2.61
RFWD2-207ENST00000474194 IL15P40933 162 aaPredicted RBP31.37■■■□□ 2.61
RFWD2-207ENST00000474194 RPAP2Q8IXW5 612 aaPredicted RBP31.37■■■□□ 2.61
RFWD2-207ENST00000474194 IRS2Q9Y4H2 1338 aa31.37■■■□□ 2.61
RFWD2-207ENST00000474194 PDE8BO95263 885 aa31.36■■■□□ 2.61
RFWD2-207ENST00000474194 TXNRD3Q86VQ6 643 aa31.36■■■□□ 2.61
RFWD2-207ENST00000474194 SIRT2Q8IXJ6 389 aa31.36■■■□□ 2.61
RFWD2-207ENST00000474194 DBNDD1Q9H9R9 158 aa31.36■■■□□ 2.61
RFWD2-207ENST00000474194 ZNF541Q9H0D2 1346 aa31.35■■■□□ 2.61
RFWD2-207ENST00000474194 UBE4AQ14139 1066 aa31.35■■■□□ 2.61
RFWD2-207ENST00000474194 DOK7Q18PE1 504 aa31.35■■■□□ 2.61
RFWD2-207ENST00000474194 ZNRF3Q9ULT6 936 aa31.34■■■□□ 2.61
RFWD2-207ENST00000474194 YDJCA8MPS7 323 aa31.33■■■□□ 2.61
RFWD2-207ENST00000474194 ECE2O60344 883 aa31.33■■■□□ 2.61
RFWD2-207ENST00000474194 C15orf52Q6ZUT6 534 aaKnown RBP31.33■■■□□ 2.61
RFWD2-207ENST00000474194 SCN9AQ15858 1988 aa31.32■■■□□ 2.6
RFWD2-207ENST00000474194 CEP126Q9P2H0 1117 aa31.32■■■□□ 2.6
RFWD2-207ENST00000474194 SURF6O75683 361 aaKnown RBP31.31■■■□□ 2.6
RFWD2-207ENST00000474194 G3BP1Q13283 466 aaKnown RBP eCLIP31.31■■■□□ 2.6
RFWD2-207ENST00000474194 NOP58Q9Y2X3 529 aaKnown RBP31.31■■■□□ 2.6
RFWD2-207ENST00000474194 GLTPD2A6NH11 291 aa31.3■■■□□ 2.6
RFWD2-207ENST00000474194 FGFR2P21802 821 aa31.3■■■□□ 2.6
RFWD2-207ENST00000474194 EIF6P56537 245 aaKnown RBP31.3■■■□□ 2.6
RFWD2-207ENST00000474194 PUM3Q15397 648 aaKnown RBP31.3■■■□□ 2.6
RFWD2-207ENST00000474194 HMMRO75330 724 aa31.29■■■□□ 2.6
RFWD2-207ENST00000474194 ZNF526Q8TF50 670 aaPredicted RBP31.29■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms