RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 XDHP47989 1333 aa23.89■■□□□ 1.42
PTCD3-210ENST00000473829 ANKRD18BA2A2Z9 1011 aa23.89■■□□□ 1.41
PTCD3-210ENST00000473829 WTIPA6NIX2 430 aaPredicted RBP23.89■■□□□ 1.41
PTCD3-210ENST00000473829 RIMBP2O15034 1052 aa23.89■■□□□ 1.41
PTCD3-210ENST00000473829 UFL1O94874 794 aa23.89■■□□□ 1.41
PTCD3-210ENST00000473829 IGHMBP2P38935 993 aaKnown RBP23.89■■□□□ 1.41
PTCD3-210ENST00000473829 EIF6P56537 245 aaKnown RBP23.89■■□□□ 1.41
PTCD3-210ENST00000473829 WASHC4Q2M389 1173 aa23.89■■□□□ 1.41
PTCD3-210ENST00000473829 ARHGAP45Q92619 1136 aa23.89■■□□□ 1.41
PTCD3-210ENST00000473829 YDJCA8MPS7 323 aa23.88■■□□□ 1.41
PTCD3-210ENST00000473829 TOMM70O94826 608 aa23.88■■□□□ 1.41
PTCD3-210ENST00000473829 CCT4P50991 539 aaKnown RBP23.88■■□□□ 1.41
PTCD3-210ENST00000473829 IFIT5Q13325 482 aaKnown RBP23.88■■□□□ 1.41
PTCD3-210ENST00000473829 ANKRD44Q8N8A2 993 aa23.88■■□□□ 1.41
PTCD3-210ENST00000473829 BICC1Q9H694 974 aaKnown RBP23.88■■□□□ 1.41
PTCD3-210ENST00000473829 GGA1Q9UJY5 639 aa23.88■■□□□ 1.41
PTCD3-210ENST00000473829 ZNRF3Q9ULT6 936 aa23.88■■□□□ 1.41
PTCD3-210ENST00000473829 TRIM27P14373 513 aa23.87■■□□□ 1.41
PTCD3-210ENST00000473829 GPC2Q8N158 579 aa23.87■■□□□ 1.41
PTCD3-210ENST00000473829 SCN9AQ15858 1988 aa23.87■■□□□ 1.41
PTCD3-210ENST00000473829 RABL6Q3YEC7 729 aaPredicted RBP23.86■■□□□ 1.41
PTCD3-210ENST00000473829 C16orf71Q8IYS4 520 aaPredicted RBP23.86■■□□□ 1.41
PTCD3-210ENST00000473829 FRAT1Q92837 279 aaPredicted RBP23.86■■□□□ 1.41
PTCD3-210ENST00000473829 ZNF594Q96JF6 807 aaPredicted RBP23.86■■□□□ 1.41
PTCD3-210ENST00000473829 DBNDD1Q9H9R9 158 aa23.86■■□□□ 1.41
PTCD3-210ENST00000473829 GJA3Q9Y6H8 435 aa23.86■■□□□ 1.41
PTCD3-210ENST00000473829 CXCL9Q07325 125 aa23.85■■□□□ 1.41
PTCD3-210ENST00000473829 EYA3Q99504 573 aa23.85■■□□□ 1.41
PTCD3-210ENST00000473829 MPHOSPH8Q99549 860 aa23.85■■□□□ 1.41
PTCD3-210ENST00000473829 ATP2B4P23634 1241 aa23.84■■□□□ 1.41
PTCD3-210ENST00000473829 DOK7Q18PE1 504 aa23.84■■□□□ 1.41
PTCD3-210ENST00000473829 CCDC57Q2TAC2 916 aa23.84■■□□□ 1.41
PTCD3-210ENST00000473829 ATF7IPQ6VMQ6 1270 aa23.84■■□□□ 1.41
PTCD3-210ENST00000473829 RBM46Q8TBY0 533 aaKnown RBP23.84■■□□□ 1.41
PTCD3-210ENST00000473829 RAD17O75943 681 aa23.83■■□□□ 1.41
PTCD3-210ENST00000473829 CHRNDQ07001 517 aa23.83■■□□□ 1.41
PTCD3-210ENST00000473829 INTS3Q68E01 1043 aaKnown RBP23.83■■□□□ 1.41
PTCD3-210ENST00000473829 ADAMTSL1Q8N6G6 1762 aa23.83■■□□□ 1.4
PTCD3-210ENST00000473829 IPO8O15397 1037 aaKnown RBP23.82■■□□□ 1.4
PTCD3-210ENST00000473829 ECE2O60344 883 aa23.82■■□□□ 1.4
PTCD3-210ENST00000473829 POTEIP0CG38 1075 aa23.82■■□□□ 1.4
PTCD3-210ENST00000473829 POTEJP0CG39 1038 aa23.82■■□□□ 1.4
PTCD3-210ENST00000473829 SCNN1DP51172 638 aa23.82■■□□□ 1.4
PTCD3-210ENST00000473829 ZC3H12CQ9C0D7 883 aaKnown RBP23.82■■□□□ 1.4
PTCD3-210ENST00000473829 TAF1DQ9H5J8 278 aaPredicted RBP23.82■■□□□ 1.4
PTCD3-210ENST00000473829 PSME4Q14997 1843 aa23.82■■□□□ 1.4
PTCD3-210ENST00000473829 MED23Q9ULK4 1368 aa23.81■■□□□ 1.4
PTCD3-210ENST00000473829 IQCA1LA6NCM1 817 aa23.81■■□□□ 1.4
PTCD3-210ENST00000473829 CIAPIN1Q6FI81 312 aa23.81■■□□□ 1.4
PTCD3-210ENST00000473829 CLUAP1Q96AJ1 413 aa23.81■■□□□ 1.4
PTCD3-210ENST00000473829 MEIS3Q99687 375 aa23.81■■□□□ 1.4
PTCD3-210ENST00000473829 KCNQ5Q9NR82 932 aa23.81■■□□□ 1.4
PTCD3-210ENST00000473829 ZNF646O15015 1829 aaPredicted RBP23.8■■□□□ 1.4
PTCD3-210ENST00000473829 KLRK1P26718 216 aa23.8■■□□□ 1.4
PTCD3-210ENST00000473829 TAF7LQ5H9L4 462 aa23.8■■□□□ 1.4
PTCD3-210ENST00000473829 HELBQ8NG08 1087 aaPredicted RBP23.8■■□□□ 1.4
PTCD3-210ENST00000473829 HACL1Q9UJ83 578 aa23.8■■□□□ 1.4
PTCD3-210ENST00000473829 SNAP23O00161 211 aa23.79■■□□□ 1.4
PTCD3-210ENST00000473829 UBTFL1P0CB47 393 aaPredicted RBP23.79■■□□□ 1.4
PTCD3-210ENST00000473829 ZKSCAN2Q63HK3 967 aa23.79■■□□□ 1.4
PTCD3-210ENST00000473829 LDHAL6AQ6ZMR3 332 aa23.79■■□□□ 1.4
PTCD3-210ENST00000473829 TXNRD3Q86VQ6 643 aa23.79■■□□□ 1.4
PTCD3-210ENST00000473829 PUS3Q9BZE2 481 aaKnown RBP23.79■■□□□ 1.4
PTCD3-210ENST00000473829 ANKRD2Q9GZV1 360 aa23.79■■□□□ 1.4
PTCD3-210ENST00000473829 TAF5LO75529 589 aa23.78■■□□□ 1.4
PTCD3-210ENST00000473829 EPHX2P34913 555 aa23.78■■□□□ 1.4
PTCD3-210ENST00000473829 EPS15P42566 896 aa23.78■■□□□ 1.4
PTCD3-210ENST00000473829 GMPSP49915 693 aaPredicted RBP23.78■■□□□ 1.4
PTCD3-210ENST00000473829 LEMD3Q9Y2U8 911 aa23.78■■□□□ 1.4
PTCD3-210ENST00000473829 ZNF804BA4D1E1 1349 aa23.78■■□□□ 1.4
PTCD3-210ENST00000473829 PSMD14O00487 310 aa23.77■■□□□ 1.4
PTCD3-210ENST00000473829 SMC1BQ8NDV3 1235 aa23.77■■□□□ 1.4
PTCD3-210ENST00000473829 KLHDC4Q8TBB5 520 aa23.77■■□□□ 1.4
PTCD3-210ENST00000473829 CNNM1Q9NRU3 951 aa23.77■■□□□ 1.4
PTCD3-210ENST00000473829 LRRFIP2Q9Y608 721 aaKnown RBP23.77■■□□□ 1.4
PTCD3-210ENST00000473829 IRS2Q9Y4H2 1338 aa23.77■■□□□ 1.4
PTCD3-210ENST00000473829 FSTL1Q12841 308 aa23.76■■□□□ 1.39
PTCD3-210ENST00000473829 TNIP1Q15025 636 aa23.76■■□□□ 1.39
PTCD3-210ENST00000473829 TMEM57Q8N5G2 664 aa23.76■■□□□ 1.39
PTCD3-210ENST00000473829 GPRC5DQ9NZD1 345 aa23.76■■□□□ 1.39
PTCD3-210ENST00000473829 LMOD1P29536 600 aaPredicted RBP23.75■■□□□ 1.39
PTCD3-210ENST00000473829 RFX5P48382 616 aaPredicted RBP23.75■■□□□ 1.39
PTCD3-210ENST00000473829 ZBTB12Q9Y330 459 aaPredicted RBP23.75■■□□□ 1.39
PTCD3-210ENST00000473829 SHTN1A0MZ66 631 aa23.74■■□□□ 1.39
PTCD3-210ENST00000473829 G3V3G9 751 aa23.74■■□□□ 1.39
PTCD3-210ENST00000473829 RLBP1P12271 317 aa23.74■■□□□ 1.39
PTCD3-210ENST00000473829 HSPA6P17066 643 aa23.74■■□□□ 1.39
PTCD3-210ENST00000473829 LRRC24Q50LG9 513 aa23.74■■□□□ 1.39
PTCD3-210ENST00000473829 EAPPQ56P03 285 aaPredicted RBP23.74■■□□□ 1.39
PTCD3-210ENST00000473829 DCAF8Q5TAQ9 597 aa23.74■■□□□ 1.39
PTCD3-210ENST00000473829 RIPOR2Q9Y4F9 1068 aa23.74■■□□□ 1.39
PTCD3-210ENST00000473829 PLIN1O60240 522 aa23.73■■□□□ 1.39
PTCD3-210ENST00000473829 KCNJ4P48050 445 aa23.73■■□□□ 1.39
PTCD3-210ENST00000473829 CEP350Q5VT06 3117 aa23.73■■□□□ 1.39
PTCD3-210ENST00000473829 LDHDQ86WU2 507 aa23.72■■□□□ 1.39
PTCD3-210ENST00000473829 GNAI3P08754 354 aa23.71■■□□□ 1.39
PTCD3-210ENST00000473829 CHADLQ6NUI6 762 aa23.71■■□□□ 1.39
PTCD3-210ENST00000473829 VIL1P09327 827 aaKnown RBP23.7■■□□□ 1.38
PTCD3-210ENST00000473829 PTPN12Q05209 780 aaKnown RBP23.7■■□□□ 1.38
PTCD3-210ENST00000473829 PODNQ7Z5L7 613 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms