RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 ELP3Q9H9T3 547 aa8.28□□□□□ -1.08
CNOT4-209ENST00000473470 BRPF3Q9ULD4 1205 aa8.28□□□□□ -1.08
CNOT4-209ENST00000473470 FZD6O60353 706 aa8.27□□□□□ -1.09
CNOT4-209ENST00000473470 SPATA31C1P0DKV0 1188 aa8.27□□□□□ -1.09
CNOT4-209ENST00000473470 NID1P14543 1247 aa8.27□□□□□ -1.09
CNOT4-209ENST00000473470 PDE3BQ13370 1112 aa8.27□□□□□ -1.09
CNOT4-209ENST00000473470 CACTIN-AS1Q8N1I8 211 aa8.27□□□□□ -1.09
CNOT4-209ENST00000473470 KIF4AO95239 1232 aa8.26□□□□□ -1.09
CNOT4-209ENST00000473470 GSK3AP49840 483 aa8.26□□□□□ -1.09
CNOT4-209ENST00000473470 MLLT1Q03111 559 aaPredicted RBP8.26□□□□□ -1.09
CNOT4-209ENST00000473470 PERM1Q5SV97 790 aa8.26□□□□□ -1.09
CNOT4-209ENST00000473470 DCAF11Q8TEB1 546 aa8.26□□□□□ -1.09
CNOT4-209ENST00000473470 PMEPA1Q969W9 287 aa8.26□□□□□ -1.09
CNOT4-209ENST00000473470 TRIM11Q96F44 468 aa8.26□□□□□ -1.09
CNOT4-209ENST00000473470 CITED4Q96RK1 184 aa8.26□□□□□ -1.09
CNOT4-209ENST00000473470 LOC102724428A0A0B4J2F2 783 aa8.25□□□□□ -1.09
CNOT4-209ENST00000473470 SOWAHDA6NJG2 315 aa8.25□□□□□ -1.09
CNOT4-209ENST00000473470 SIK1P57059 783 aa8.25□□□□□ -1.09
CNOT4-209ENST00000473470 RAC1P63000 192 aa8.25□□□□□ -1.09
CNOT4-209ENST00000473470 NUDT8Q8WV74 236 aa8.25□□□□□ -1.09
CNOT4-209ENST00000473470 DCAF5Q96JK2 942 aa8.25□□□□□ -1.09
CNOT4-209ENST00000473470 PLVAPQ9BX97 442 aa8.25□□□□□ -1.09
CNOT4-209ENST00000473470 SMG9Q9H0W8 520 aaKnown RBP8.25□□□□□ -1.09
CNOT4-209ENST00000473470 TMEM63CQ9P1W3 806 aa8.25□□□□□ -1.09
CNOT4-209ENST00000473470 ZBTB42B2RXF5 422 aa8.24□□□□□ -1.09
CNOT4-209ENST00000473470 PHACTR2O75167 634 aa8.24□□□□□ -1.09
CNOT4-209ENST00000473470 NEFLP07196 543 aa8.24□□□□□ -1.09
CNOT4-209ENST00000473470 AFF1P51825 1210 aaKnown RBP8.24□□□□□ -1.09
CNOT4-209ENST00000473470 ARHGAP4P98171 946 aa8.24□□□□□ -1.09
CNOT4-209ENST00000473470 DTWD1Q8N5C7 304 aa8.24□□□□□ -1.09
CNOT4-209ENST00000473470 PLD4Q96BZ4 506 aa8.24□□□□□ -1.09
CNOT4-209ENST00000473470 NACC1Q96RE7 527 aa8.24□□□□□ -1.09
CNOT4-209ENST00000473470 SMNDC1O75940 238 aaKnown RBP eCLIP8.23□□□□□ -1.09
CNOT4-209ENST00000473470 CES1P23141 567 aa8.23□□□□□ -1.09
CNOT4-209ENST00000473470 COL8A1P27658 744 aa8.23□□□□□ -1.09
CNOT4-209ENST00000473470 NCAPG2Q86XI2 1143 aa8.23□□□□□ -1.09
CNOT4-209ENST00000473470 WFDC8Q8IUA0 241 aa8.23□□□□□ -1.09
CNOT4-209ENST00000473470 SUV39H2Q9H5I1 410 aa8.23□□□□□ -1.09
CNOT4-209ENST00000473470 SRA1Q9HD15 236 aaKnown RBP8.23□□□□□ -1.09
CNOT4-209ENST00000473470 FAM177BA6PVY3 158 aa8.22□□□□□ -1.09
CNOT4-209ENST00000473470 PDIA4P13667 645 aaKnown RBP8.22□□□□□ -1.09
CNOT4-209ENST00000473470 GGNBP2Q9H3C7 697 aa8.22□□□□□ -1.09
CNOT4-209ENST00000473470 CCDC87Q9NVE4 849 aa8.22□□□□□ -1.09
CNOT4-209ENST00000473470 IVNS1ABPQ9Y6Y0 642 aa8.22□□□□□ -1.09
CNOT4-209ENST00000473470 TNFRSF21O75509 655 aa8.21□□□□□ -1.1
CNOT4-209ENST00000473470 IGHA1P01876 353 aa8.21□□□□□ -1.1
CNOT4-209ENST00000473470 EDN3P14138 238 aa8.21□□□□□ -1.1
CNOT4-209ENST00000473470 COL9A3Q14050 684 aaPredicted RBP8.21□□□□□ -1.1
CNOT4-209ENST00000473470 TRAPPC3LQ5T215 181 aa8.21□□□□□ -1.1
CNOT4-209ENST00000473470 MSL1Q68DK7 614 aa8.21□□□□□ -1.1
CNOT4-209ENST00000473470 C8orf86Q6ZUL3 223 aa8.21□□□□□ -1.1
CNOT4-209ENST00000473470 HFE2Q6ZVN8 426 aa8.21□□□□□ -1.1
CNOT4-209ENST00000473470 KCTD17Q8N5Z5 321 aa8.21□□□□□ -1.1
CNOT4-209ENST00000473470 DMRTB1Q96MA1 342 aa8.21□□□□□ -1.1
CNOT4-209ENST00000473470 FAM129BQ96TA1 746 aa8.21□□□□□ -1.1
CNOT4-209ENST00000473470 MUC3BQ9H195 1237 aa8.21□□□□□ -1.1
CNOT4-209ENST00000473470 KANSL3Q9P2N6 904 aa8.21□□□□□ -1.1
CNOT4-209ENST00000473470 BIN2Q9UBW5 565 aaPredicted RBP8.21□□□□□ -1.1
CNOT4-209ENST00000473470 AMOTL2Q9Y2J4 779 aa8.21□□□□□ -1.1
CNOT4-209ENST00000473470 APBA3O96018 575 aa8.2□□□□□ -1.1
CNOT4-209ENST00000473470 TRIM28Q13263 835 aaKnown RBP8.2□□□□□ -1.1
CNOT4-209ENST00000473470 MAP4K3Q8IVH8 894 aa8.2□□□□□ -1.1
CNOT4-209ENST00000473470 RBCK1Q9BYM8 510 aa8.2□□□□□ -1.1
CNOT4-209ENST00000473470 A6NHS1 94 aa8.19□□□□□ -1.1
CNOT4-209ENST00000473470 J3QW42 95 aa8.19□□□□□ -1.1
CNOT4-209ENST00000473470 ELNP15502 786 aa8.19□□□□□ -1.1
CNOT4-209ENST00000473470 GRIK5Q16478 980 aa8.19□□□□□ -1.1
CNOT4-209ENST00000473470 CHRDQ9H2X0 955 aa8.19□□□□□ -1.1
CNOT4-209ENST00000473470 DCTN4Q9UJW0 460 aa8.19□□□□□ -1.1
CNOT4-209ENST00000473470 A0A0A0MRY4 1105 aa8.18□□□□□ -1.1
CNOT4-209ENST00000473470 CYP2E1P05181 493 aaPredicted RBP8.18□□□□□ -1.1
CNOT4-209ENST00000473470 PTPRAP18433 802 aa8.18□□□□□ -1.1
CNOT4-209ENST00000473470 ECM1Q16610 540 aa8.18□□□□□ -1.1
CNOT4-209ENST00000473470 C1orf127Q8N9H9 656 aa8.18□□□□□ -1.1
CNOT4-209ENST00000473470 PBX4Q9BYU1 374 aa8.18□□□□□ -1.1
CNOT4-209ENST00000473470 PLA2G4EQ3MJ16 856 aa8.17□□□□□ -1.1
CNOT4-209ENST00000473470 COL13A1Q5TAT6 717 aaPredicted RBP8.17□□□□□ -1.1
CNOT4-209ENST00000473470 GDF6Q6KF10 455 aaPredicted RBP8.17□□□□□ -1.1
CNOT4-209ENST00000473470 FMR1NBQ8N0W7 255 aaPredicted RBP8.17□□□□□ -1.1
CNOT4-209ENST00000473470 CEP120Q8N960 986 aa8.17□□□□□ -1.1
CNOT4-209ENST00000473470 ALKBH8Q96BT7 664 aaKnown RBP8.17□□□□□ -1.1
CNOT4-209ENST00000473470 CNTN3Q9P232 1028 aa8.17□□□□□ -1.1
CNOT4-209ENST00000473470 SALL4Q9UJQ4 1053 aa8.17□□□□□ -1.1
CNOT4-209ENST00000473470 FOXD3Q9UJU5 478 aaPredicted RBP8.17□□□□□ -1.1
CNOT4-209ENST00000473470 ATP11AP98196 1134 aa8.16□□□□□ -1.1
CNOT4-209ENST00000473470 CEP135Q66GS9 1140 aa8.16□□□□□ -1.1
CNOT4-209ENST00000473470 TMC1Q8TDI8 760 aa8.16□□□□□ -1.1
CNOT4-209ENST00000473470 RASSF4Q9H2L5 321 aa8.16□□□□□ -1.1
CNOT4-209ENST00000473470 KRBA1A5PL33 1030 aa8.15□□□□□ -1.1
CNOT4-209ENST00000473470 DNAJC25Q9H1X3 360 aa8.15□□□□□ -1.1
CNOT4-209ENST00000473470 TRIM33Q9UPN9 1127 aa8.15□□□□□ -1.1
CNOT4-209ENST00000473470 C9orf172C9J069 976 aa8.14□□□□□ -1.11
CNOT4-209ENST00000473470 EREGO14944 169 aa8.14□□□□□ -1.11
CNOT4-209ENST00000473470 GPR182O15218 404 aa8.14□□□□□ -1.11
CNOT4-209ENST00000473470 CPNE3O75131 537 aaKnown RBP8.14□□□□□ -1.11
CNOT4-209ENST00000473470 MAPK1P28482 360 aa8.14□□□□□ -1.11
CNOT4-209ENST00000473470 CDC27P30260 824 aa8.14□□□□□ -1.11
CNOT4-209ENST00000473470 CABP4P57796 275 aa8.14□□□□□ -1.11
CNOT4-209ENST00000473470 NRG1Q02297 640 aaPredicted RBP8.14□□□□□ -1.11
CNOT4-209ENST00000473470 GPAT2Q6NUI2 795 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms