RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 C1orf115Q9H7X2 142 aa23.68■■□□□ 1.38
CTDSP1-207ENST00000473420 PODXL2Q9NZ53 605 aa23.68■■□□□ 1.38
CTDSP1-207ENST00000473420 SRGAP3O43295 1099 aa23.67■■□□□ 1.38
CTDSP1-207ENST00000473420 ATP8B2P98198 1209 aa23.67■■□□□ 1.38
CTDSP1-207ENST00000473420 PTPN12Q05209 780 aaKnown RBP23.67■■□□□ 1.38
CTDSP1-207ENST00000473420 DPP8Q6V1X1 898 aaPredicted RBP23.67■■□□□ 1.38
CTDSP1-207ENST00000473420 RTFDC1Q9BY42 306 aaPredicted RBP23.67■■□□□ 1.38
CTDSP1-207ENST00000473420 FBXO3Q9UK99 471 aa23.67■■□□□ 1.38
CTDSP1-207ENST00000473420 MINPP1Q9UNW1 487 aa23.67■■□□□ 1.38
CTDSP1-207ENST00000473420 XDHP47989 1333 aa23.66■■□□□ 1.38
CTDSP1-207ENST00000473420 CENPBP07199 599 aaPredicted RBP23.66■■□□□ 1.38
CTDSP1-207ENST00000473420 SUPT20HQ8NEM7 779 aa23.66■■□□□ 1.38
CTDSP1-207ENST00000473420 ANKRD2Q9GZV1 360 aa23.66■■□□□ 1.38
CTDSP1-207ENST00000473420 GPSM2P81274 684 aa23.65■■□□□ 1.38
CTDSP1-207ENST00000473420 RASSF7Q02833 373 aa23.65■■□□□ 1.38
CTDSP1-207ENST00000473420 POLA2Q14181 598 aa23.65■■□□□ 1.38
CTDSP1-207ENST00000473420 CEP85Q6P2H3 762 aa23.65■■□□□ 1.38
CTDSP1-207ENST00000473420 VPS33BQ9H267 617 aa23.65■■□□□ 1.38
CTDSP1-207ENST00000473420 COPRSQ9NQ92 184 aa23.65■■□□□ 1.38
CTDSP1-207ENST00000473420 CNNM1Q9NRU3 951 aa23.65■■□□□ 1.38
CTDSP1-207ENST00000473420 NSFL1CQ9UNZ2 370 aaKnown RBP23.65■■□□□ 1.38
CTDSP1-207ENST00000473420 PNMA6EA0A0J9YXQ4 647 aa23.64■■□□□ 1.37
CTDSP1-207ENST00000473420 RPAP2Q8IXW5 612 aaPredicted RBP23.64■■□□□ 1.37
CTDSP1-207ENST00000473420 SSH3Q8TE77 659 aa23.64■■□□□ 1.37
CTDSP1-207ENST00000473420 CRBNQ96SW2 442 aa23.64■■□□□ 1.37
CTDSP1-207ENST00000473420 TIAM2Q8IVF5 1701 aa23.64■■□□□ 1.37
CTDSP1-207ENST00000473420 MROH5Q6ZUA9 1318 aa23.63■■□□□ 1.37
CTDSP1-207ENST00000473420 LMNB1P20700 586 aa23.63■■□□□ 1.37
CTDSP1-207ENST00000473420 CHRNDQ07001 517 aa23.63■■□□□ 1.37
CTDSP1-207ENST00000473420 AAMPQ13685 434 aa23.63■■□□□ 1.37
CTDSP1-207ENST00000473420 KLHDC4Q8TBB5 520 aa23.63■■□□□ 1.37
CTDSP1-207ENST00000473420 ANKIB1Q9P2G1 1089 aa23.63■■□□□ 1.37
CTDSP1-207ENST00000473420 RIPOR2Q9Y4F9 1068 aa23.63■■□□□ 1.37
CTDSP1-207ENST00000473420 EYA2O00167 538 aa23.62■■□□□ 1.37
CTDSP1-207ENST00000473420 CIAO1O76071 339 aa23.62■■□□□ 1.37
CTDSP1-207ENST00000473420 ATP2B4P23634 1241 aa23.62■■□□□ 1.37
CTDSP1-207ENST00000473420 PUS3Q9BZE2 481 aaKnown RBP23.62■■□□□ 1.37
CTDSP1-207ENST00000473420 LRRC24Q50LG9 513 aa23.61■■□□□ 1.37
CTDSP1-207ENST00000473420 TBC1D16Q8TBP0 767 aa23.61■■□□□ 1.37
CTDSP1-207ENST00000473420 GGA1Q9UJY5 639 aa23.61■■□□□ 1.37
CTDSP1-207ENST00000473420 LEMD3Q9Y2U8 911 aa23.61■■□□□ 1.37
CTDSP1-207ENST00000473420 IARSP41252 1262 aaKnown RBP23.6■■□□□ 1.37
CTDSP1-207ENST00000473420 PRELPP51888 382 aa23.6■■□□□ 1.37
CTDSP1-207ENST00000473420 EYA3Q99504 573 aa23.6■■□□□ 1.37
CTDSP1-207ENST00000473420 POLLQ9UGP5 575 aa23.6■■□□□ 1.37
CTDSP1-207ENST00000473420 UTRNP46939 3433 aa23.6■■□□□ 1.37
CTDSP1-207ENST00000473420 UFL1O94874 794 aa23.59■■□□□ 1.37
CTDSP1-207ENST00000473420 ATG9AQ7Z3C6 839 aa23.59■■□□□ 1.37
CTDSP1-207ENST00000473420 ZNF277Q9NRM2 450 aaPredicted RBP23.59■■□□□ 1.37
CTDSP1-207ENST00000473420 PA2G4Q9UQ80 394 aaKnown RBP23.59■■□□□ 1.37
CTDSP1-207ENST00000473420 C6orf229H3BNL8 230 aa23.58■■□□□ 1.37
CTDSP1-207ENST00000473420 HMMRO75330 724 aa23.58■■□□□ 1.37
CTDSP1-207ENST00000473420 IL15P40933 162 aaPredicted RBP23.58■■□□□ 1.37
CTDSP1-207ENST00000473420 KIAA2012Q0VF49 1180 aa23.58■■□□□ 1.37
CTDSP1-207ENST00000473420 C9orf131Q5VYM1 1079 aa23.58■■□□□ 1.37
CTDSP1-207ENST00000473420 SIL1Q9H173 461 aa23.58■■□□□ 1.37
CTDSP1-207ENST00000473420 RNF181Q9P0P0 153 aa23.58■■□□□ 1.37
CTDSP1-207ENST00000473420 ZC3H4Q9UPT8 1303 aaKnown RBP23.58■■□□□ 1.36
CTDSP1-207ENST00000473420 MED23Q9ULK4 1368 aa23.57■■□□□ 1.36
CTDSP1-207ENST00000473420 WASHC4Q2M389 1173 aa23.57■■□□□ 1.36
CTDSP1-207ENST00000473420 METTL24Q5JXM2 366 aa23.57■■□□□ 1.36
CTDSP1-207ENST00000473420 ZNF804BA4D1E1 1349 aa23.57■■□□□ 1.36
CTDSP1-207ENST00000473420 PPIP5K2O43314 1243 aa23.56■■□□□ 1.36
CTDSP1-207ENST00000473420 VGLL2Q8N8G2 317 aa23.56■■□□□ 1.36
CTDSP1-207ENST00000473420 NOP58Q9Y2X3 529 aaKnown RBP23.56■■□□□ 1.36
CTDSP1-207ENST00000473420 COL4A5P29400 1685 aa23.55■■□□□ 1.36
CTDSP1-207ENST00000473420 TAF5LO75529 589 aa23.55■■□□□ 1.36
CTDSP1-207ENST00000473420 PDE8BO95263 885 aa23.55■■□□□ 1.36
CTDSP1-207ENST00000473420 UBE4AQ14139 1066 aa23.55■■□□□ 1.36
CTDSP1-207ENST00000473420 AOC3Q16853 763 aa23.55■■□□□ 1.36
CTDSP1-207ENST00000473420 SIRT2Q8IXJ6 389 aa23.55■■□□□ 1.36
CTDSP1-207ENST00000473420 HELBQ8NG08 1087 aaPredicted RBP23.55■■□□□ 1.36
CTDSP1-207ENST00000473420 ARAP2Q8WZ64 1704 aa23.54■■□□□ 1.36
CTDSP1-207ENST00000473420 KCNJ4P48050 445 aa23.54■■□□□ 1.36
CTDSP1-207ENST00000473420 G3BP1Q13283 466 aaKnown RBP eCLIP23.54■■□□□ 1.36
CTDSP1-207ENST00000473420 LARGE2Q8N3Y3 721 aa23.54■■□□□ 1.36
CTDSP1-207ENST00000473420 EXOC6Q8TAG9 804 aa23.54■■□□□ 1.36
CTDSP1-207ENST00000473420 ZC3H12CQ9C0D7 883 aaKnown RBP23.54■■□□□ 1.36
CTDSP1-207ENST00000473420 C15orf52Q6ZUT6 534 aaKnown RBP23.53■■□□□ 1.36
CTDSP1-207ENST00000473420 JDP2Q8WYK2 163 aa23.53■■□□□ 1.36
CTDSP1-207ENST00000473420 CEP126Q9P2H0 1117 aa23.53■■□□□ 1.36
CTDSP1-207ENST00000473420 SURF6O75683 361 aaKnown RBP23.52■■□□□ 1.36
CTDSP1-207ENST00000473420 IRS2Q9Y4H2 1338 aa23.52■■□□□ 1.36
CTDSP1-207ENST00000473420 PSME4Q14997 1843 aa23.52■■□□□ 1.36
CTDSP1-207ENST00000473420 PUM3Q15397 648 aaKnown RBP23.51■■□□□ 1.35
CTDSP1-207ENST00000473420 HSP90AB4PQ58FF6 505 aa23.51■■□□□ 1.35
CTDSP1-207ENST00000473420 NIM1KQ8IY84 436 aa23.51■■□□□ 1.35
CTDSP1-207ENST00000473420 GPR101Q96P66 508 aaPredicted RBP23.51■■□□□ 1.35
CTDSP1-207ENST00000473420 WTIPA6NIX2 430 aaPredicted RBP23.5■■□□□ 1.35
CTDSP1-207ENST00000473420 RIMBP2O15034 1052 aa23.5■■□□□ 1.35
CTDSP1-207ENST00000473420 FGFR2P21802 821 aa23.5■■□□□ 1.35
CTDSP1-207ENST00000473420 PCDHB15Q9Y5E8 787 aa23.5■■□□□ 1.35
CTDSP1-207ENST00000473420 FZD9O00144 591 aa23.49■■□□□ 1.35
CTDSP1-207ENST00000473420 OS9Q13438 667 aaPredicted RBP23.49■■□□□ 1.35
CTDSP1-207ENST00000473420 SNAP23O00161 211 aa23.48■■□□□ 1.35
CTDSP1-207ENST00000473420 SASH1O94885 1247 aa23.48■■□□□ 1.35
CTDSP1-207ENST00000473420 IRX6P78412 446 aaPredicted RBP23.48■■□□□ 1.35
CTDSP1-207ENST00000473420 ERC1Q8IUD2 1116 aa23.48■■□□□ 1.35
CTDSP1-207ENST00000473420 LPIN2Q92539 896 aa23.48■■□□□ 1.35
CTDSP1-207ENST00000473420 ZNRF3Q9ULT6 936 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms