RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 NRLP54845 237 aa8.08□□□□□ -1.12
PRPF40A-208ENST00000472760 DAB2P98082 770 aa8.08□□□□□ -1.12
PRPF40A-208ENST00000472760 PCSK7Q16549 785 aa8.08□□□□□ -1.12
PRPF40A-208ENST00000472760 TMC4Q7Z404 712 aa8.08□□□□□ -1.12
PRPF40A-208ENST00000472760 IRF7Q92985 503 aa8.08□□□□□ -1.12
PRPF40A-208ENST00000472760 SPACA7Q96KW9 195 aa8.08□□□□□ -1.12
PRPF40A-208ENST00000472760 FAM161BQ96MY7 647 aa8.08□□□□□ -1.12
PRPF40A-208ENST00000472760 SALL4Q9UJQ4 1053 aa8.08□□□□□ -1.12
PRPF40A-208ENST00000472760 SORBS3O60504 671 aa8.07□□□□□ -1.12
PRPF40A-208ENST00000472760 ARAFP10398 606 aa8.07□□□□□ -1.12
PRPF40A-208ENST00000472760 ADH6P28332 368 aa8.07□□□□□ -1.12
PRPF40A-208ENST00000472760 IRS1P35568 1242 aa8.07□□□□□ -1.12
PRPF40A-208ENST00000472760 GPLD1P80108 840 aa8.07□□□□□ -1.12
PRPF40A-208ENST00000472760 MLLT1Q03111 559 aaPredicted RBP8.07□□□□□ -1.12
PRPF40A-208ENST00000472760 NFX1Q12986 1120 aaKnown RBP8.07□□□□□ -1.12
PRPF40A-208ENST00000472760 PI16Q6UXB8 463 aa8.07□□□□□ -1.12
PRPF40A-208ENST00000472760 TRPM4Q8TD43 1214 aa8.07□□□□□ -1.12
PRPF40A-208ENST00000472760 DNAJB12Q9NXW2 375 aaKnown RBP8.07□□□□□ -1.12
PRPF40A-208ENST00000472760 KIAA1522Q9P206 1035 aaPredicted RBP8.07□□□□□ -1.12
PRPF40A-208ENST00000472760 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.07□□□□□ -1.12
PRPF40A-208ENST00000472760 ERBB4Q15303 1308 aa8.06□□□□□ -1.12
PRPF40A-208ENST00000472760 LOC102724428A0A0B4J2F2 783 aa8.06□□□□□ -1.12
PRPF40A-208ENST00000472760 HOXD8P13378 290 aaPredicted RBP8.06□□□□□ -1.12
PRPF40A-208ENST00000472760 SIK1P57059 783 aa8.06□□□□□ -1.12
PRPF40A-208ENST00000472760 COL13A1Q5TAT6 717 aaPredicted RBP8.06□□□□□ -1.12
PRPF40A-208ENST00000472760 HFE2Q6ZVN8 426 aa8.06□□□□□ -1.12
PRPF40A-208ENST00000472760 VTI1BQ9UEU0 232 aa8.06□□□□□ -1.12
PRPF40A-208ENST00000472760 IGF1RP08069 1367 aa8.06□□□□□ -1.12
PRPF40A-208ENST00000472760 NEURL1BA8MQ27 555 aa8.05□□□□□ -1.12
PRPF40A-208ENST00000472760 ZBTB42B2RXF5 422 aa8.05□□□□□ -1.12
PRPF40A-208ENST00000472760 J3QW42 95 aa8.05□□□□□ -1.12
PRPF40A-208ENST00000472760 GIPC1O14908 333 aa8.05□□□□□ -1.12
PRPF40A-208ENST00000472760 KIF4AO95239 1232 aa8.05□□□□□ -1.12
PRPF40A-208ENST00000472760 GHRHP01286 108 aa8.05□□□□□ -1.12
PRPF40A-208ENST00000472760 RNFT1Q5M7Z0 435 aa8.05□□□□□ -1.12
PRPF40A-208ENST00000472760 RBSNQ9H1K0 784 aa8.05□□□□□ -1.12
PRPF40A-208ENST00000472760 EHD4Q9H223 541 aa8.05□□□□□ -1.12
PRPF40A-208ENST00000472760 LATS2Q9NRM7 1088 aa8.05□□□□□ -1.12
PRPF40A-208ENST00000472760 PPP4R2Q9NY27 417 aa8.05□□□□□ -1.12
PRPF40A-208ENST00000472760 KLF15Q9UIH9 416 aa8.05□□□□□ -1.12
PRPF40A-208ENST00000472760 AK5Q9Y6K8 562 aa8.05□□□□□ -1.12
PRPF40A-208ENST00000472760 A0A1W2PP55 124 aa8.04□□□□□ -1.12
PRPF40A-208ENST00000472760 EIF4BP23588 611 aaKnown RBP8.04□□□□□ -1.12
PRPF40A-208ENST00000472760 VAMP1P23763 118 aa8.04□□□□□ -1.12
PRPF40A-208ENST00000472760 SRSF11Q05519 484 aaKnown RBP8.04□□□□□ -1.12
PRPF40A-208ENST00000472760 KIAA0319Q5VV43 1072 aa8.04□□□□□ -1.12
PRPF40A-208ENST00000472760 TNFRSF25Q93038 417 aa8.04□□□□□ -1.12
PRPF40A-208ENST00000472760 CNTNAP3BQ96NU0 1288 aa8.04□□□□□ -1.12
PRPF40A-208ENST00000472760 OSMRQ99650 979 aa8.04□□□□□ -1.12
PRPF40A-208ENST00000472760 BCO2Q9BYV7 579 aa8.04□□□□□ -1.12
PRPF40A-208ENST00000472760 CNTNAP3Q9BZ76 1288 aa8.04□□□□□ -1.12
PRPF40A-208ENST00000472760 SUV39H2Q9H5I1 410 aa8.04□□□□□ -1.12
PRPF40A-208ENST00000472760 GGA1Q9UJY5 639 aa8.04□□□□□ -1.12
PRPF40A-208ENST00000472760 EIF2AK2P19525 551 aaKnown RBP8.03□□□□□ -1.12
PRPF40A-208ENST00000472760 ADH7P40394 386 aa8.03□□□□□ -1.12
PRPF40A-208ENST00000472760 MRPL58Q14197 206 aaKnown RBP8.03□□□□□ -1.12
PRPF40A-208ENST00000472760 TSNAXIP1Q2TAA8 658 aa8.03□□□□□ -1.12
PRPF40A-208ENST00000472760 PEAR1Q5VY43 1037 aaPredicted RBP8.03□□□□□ -1.12
PRPF40A-208ENST00000472760 NXPE4Q6UWF7 544 aa8.03□□□□□ -1.12
PRPF40A-208ENST00000472760 FAM35AQ86V20 835 aa8.03□□□□□ -1.12
PRPF40A-208ENST00000472760 GOLGA6L1Q8N7Z2 621 aa8.03□□□□□ -1.12
PRPF40A-208ENST00000472760 CEP120Q8N960 986 aa8.03□□□□□ -1.12
PRPF40A-208ENST00000472760 OXCT2Q9BYC2 517 aaPredicted RBP8.03□□□□□ -1.12
PRPF40A-208ENST00000472760 C12orf49Q9H741 205 aa8.03□□□□□ -1.12
PRPF40A-208ENST00000472760 GDF2Q9UK05 429 aaPredicted RBP8.03□□□□□ -1.12
PRPF40A-208ENST00000472760 TRAK1Q9UPV9 953 aa8.03□□□□□ -1.12
PRPF40A-208ENST00000472760 ADARB2-AS1A8MUL3 147 aa8.02□□□□□ -1.13
PRPF40A-208ENST00000472760 CPB1P15086 417 aa8.02□□□□□ -1.13
PRPF40A-208ENST00000472760 ACPPP15309 386 aa8.02□□□□□ -1.13
PRPF40A-208ENST00000472760 ALAS2P22557 587 aa8.02□□□□□ -1.13
PRPF40A-208ENST00000472760 GRM2Q14416 872 aa8.02□□□□□ -1.13
PRPF40A-208ENST00000472760 MICALL1Q8N3F8 863 aa8.02□□□□□ -1.13
PRPF40A-208ENST00000472760 ZKSCAN3Q9BRR0 538 aa8.02□□□□□ -1.13
PRPF40A-208ENST00000472760 OSBPL7Q9BZF2 842 aa8.02□□□□□ -1.13
PRPF40A-208ENST00000472760 SRCIN1Q9C0H9 1055 aa8.02□□□□□ -1.13
PRPF40A-208ENST00000472760 LIN7BQ9HAP6 207 aa8.02□□□□□ -1.13
PRPF40A-208ENST00000472760 SLC6A14Q9UN76 642 aa8.02□□□□□ -1.13
PRPF40A-208ENST00000472760 ELOA3CA0A087WX78 387 aaPredicted RBP8.01□□□□□ -1.13
PRPF40A-208ENST00000472760 ELOA3DA6NLF2 546 aaPredicted RBP8.01□□□□□ -1.13
PRPF40A-208ENST00000472760 ADAMTS2O95450 1211 aa8.01□□□□□ -1.13
PRPF40A-208ENST00000472760 ELOA3BQ3SY89 546 aa8.01□□□□□ -1.13
PRPF40A-208ENST00000472760 ELMSAN1Q6PJG2 1045 aa8.01□□□□□ -1.13
PRPF40A-208ENST00000472760 FCHSD1Q86WN1 690 aa8.01□□□□□ -1.13
PRPF40A-208ENST00000472760 ELOA3Q8NG57 546 aa8.01□□□□□ -1.13
PRPF40A-208ENST00000472760 BACH2Q9BYV9 841 aa8.01□□□□□ -1.13
PRPF40A-208ENST00000472760 DZANK1Q9NVP4 752 aa8.01□□□□□ -1.13
PRPF40A-208ENST00000472760 FAM8A1Q9UBU6 413 aa8.01□□□□□ -1.13
PRPF40A-208ENST00000472760 TRPA1O75762 1119 aa8□□□□□ -1.13
PRPF40A-208ENST00000472760 RECKO95980 971 aa8□□□□□ -1.13
PRPF40A-208ENST00000472760 KRT76Q01546 638 aa8□□□□□ -1.13
PRPF40A-208ENST00000472760 TMEM87AQ8NBN3 555 aa8□□□□□ -1.13
PRPF40A-208ENST00000472760 PBX4Q9BYU1 374 aa8□□□□□ -1.13
PRPF40A-208ENST00000472760 RASSF4Q9H2L5 321 aa8□□□□□ -1.13
PRPF40A-208ENST00000472760 SMNDC1O75940 238 aaKnown RBP eCLIP7.99□□□□□ -1.13
PRPF40A-208ENST00000472760 WFS1O76024 890 aa7.99□□□□□ -1.13
PRPF40A-208ENST00000472760 ATP11AP98196 1134 aa7.99□□□□□ -1.13
PRPF40A-208ENST00000472760 CEP135Q66GS9 1140 aa7.99□□□□□ -1.13
PRPF40A-208ENST00000472760 SLCO4C1Q6ZQN7 724 aa7.99□□□□□ -1.13
PRPF40A-208ENST00000472760 ACDQ96AP0 544 aa7.99□□□□□ -1.13
PRPF40A-208ENST00000472760 PLD4Q96BZ4 506 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms