RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 DCTPP1Q9H773 170 aa20.84■□□□□ 0.93
CCM2-205ENST00000472223 CEP126Q9P2H0 1117 aa20.84■□□□□ 0.93
CCM2-205ENST00000472223 NOP58Q9Y2X3 529 aaKnown RBP20.84■□□□□ 0.93
CCM2-205ENST00000472223 CACNA1SQ13698 1873 aa20.84■□□□□ 0.93
CCM2-205ENST00000472223 SPEF2Q9C093 1822 aa20.83■□□□□ 0.93
CCM2-205ENST00000472223 KCNA3P22001 575 aa20.83■□□□□ 0.93
CCM2-205ENST00000472223 NLGN2Q8NFZ4 835 aa20.83■□□□□ 0.93
CCM2-205ENST00000472223 ANKIB1Q9P2G1 1089 aa20.83■□□□□ 0.93
CCM2-205ENST00000472223 EXOC6BQ9Y2D4 811 aa20.83■□□□□ 0.93
CCM2-205ENST00000472223 ATP6V0A2Q9Y487 856 aa20.83■□□□□ 0.93
CCM2-205ENST00000472223 KCNJ4P48050 445 aa20.82■□□□□ 0.92
CCM2-205ENST00000472223 BCS1LQ9Y276 419 aa20.82■□□□□ 0.92
CCM2-205ENST00000472223 APBB1O00213 710 aa20.81■□□□□ 0.92
CCM2-205ENST00000472223 LRRC24Q50LG9 513 aa20.81■□□□□ 0.92
CCM2-205ENST00000472223 KIF1BPQ96EK5 621 aa20.81■□□□□ 0.92
CCM2-205ENST00000472223 PUS3Q9BZE2 481 aaKnown RBP20.81■□□□□ 0.92
CCM2-205ENST00000472223 ZNF219Q9P2Y4 722 aaPredicted RBP20.81■□□□□ 0.92
CCM2-205ENST00000472223 MINPP1Q9UNW1 487 aa20.81■□□□□ 0.92
CCM2-205ENST00000472223 AKAP2Q9Y2D5 859 aa20.81■□□□□ 0.92
CCM2-205ENST00000472223 RIPOR2Q9Y4F9 1068 aa20.81■□□□□ 0.92
CCM2-205ENST00000472223 IGHDP01880 384 aa20.8■□□□□ 0.92
CCM2-205ENST00000472223 CHRNDQ07001 517 aa20.8■□□□□ 0.92
CCM2-205ENST00000472223 LRRCC1Q9C099 1032 aa20.8■□□□□ 0.92
CCM2-205ENST00000472223 NSFL1CQ9UNZ2 370 aaKnown RBP20.8■□□□□ 0.92
CCM2-205ENST00000472223 GTF3C3Q9Y5Q9 886 aa20.8■□□□□ 0.92
CCM2-205ENST00000472223 C21orf2O43822 256 aa20.79■□□□□ 0.92
CCM2-205ENST00000472223 CCDC93Q567U6 631 aa20.79■□□□□ 0.92
CCM2-205ENST00000472223 CENPQQ7L2Z9 268 aaPredicted RBP20.79■□□□□ 0.92
CCM2-205ENST00000472223 RTKN2Q8IZC4 609 aa20.79■□□□□ 0.92
CCM2-205ENST00000472223 PELP1Q8IZL8 1130 aaKnown RBP20.79■□□□□ 0.92
CCM2-205ENST00000472223 MPNDQ8N594 471 aa20.79■□□□□ 0.92
CCM2-205ENST00000472223 WWC3Q9ULE0 1092 aa20.79■□□□□ 0.92
CCM2-205ENST00000472223 XDHP47989 1333 aa20.78■□□□□ 0.92
CCM2-205ENST00000472223 SLX4Q8IY92 1834 aa20.78■□□□□ 0.92
CCM2-205ENST00000472223 DCAF8L1A6NGE4 600 aa20.78■□□□□ 0.92
CCM2-205ENST00000472223 B4GALNT3Q6L9W6 998 aa20.78■□□□□ 0.92
CCM2-205ENST00000472223 DPP8Q6V1X1 898 aaPredicted RBP20.78■□□□□ 0.92
CCM2-205ENST00000472223 ATG9AQ7Z3C6 839 aa20.78■□□□□ 0.92
CCM2-205ENST00000472223 CLASRPQ8N2M8 674 aaKnown RBP20.78■□□□□ 0.92
CCM2-205ENST00000472223 KIAA1551Q9HCM1 1747 aa20.78■□□□□ 0.92
CCM2-205ENST00000472223 PDE8BO95263 885 aa20.77■□□□□ 0.92
CCM2-205ENST00000472223 ATP2B4P23634 1241 aa20.77■□□□□ 0.92
CCM2-205ENST00000472223 ANKRD45Q5TZF3 282 aa20.77■□□□□ 0.92
CCM2-205ENST00000472223 SUPT20HQ8NEM7 779 aa20.77■□□□□ 0.92
CCM2-205ENST00000472223 RHPN1Q8TCX5 695 aa20.77■□□□□ 0.92
CCM2-205ENST00000472223 BCL11AQ9H165 835 aa20.77■□□□□ 0.92
CCM2-205ENST00000472223 GGA1Q9UJY5 639 aa20.77■□□□□ 0.92
CCM2-205ENST00000472223 LEMD3Q9Y2U8 911 aa20.77■□□□□ 0.92
CCM2-205ENST00000472223 TFCP2Q12800 502 aa20.76■□□□□ 0.91
CCM2-205ENST00000472223 HELBQ8NG08 1087 aaPredicted RBP20.76■□□□□ 0.91
CCM2-205ENST00000472223 BRCA1P38398 1863 aaKnown RBP20.75■□□□□ 0.91
CCM2-205ENST00000472223 C6orf229H3BNL8 230 aa20.75■□□□□ 0.91
CCM2-205ENST00000472223 TAF5LO75529 589 aa20.75■□□□□ 0.91
CCM2-205ENST00000472223 IFIT1P09914 478 aaKnown RBP20.75■□□□□ 0.91
CCM2-205ENST00000472223 SLC5A1P13866 664 aa20.75■□□□□ 0.91
CCM2-205ENST00000472223 PUM3Q15397 648 aaKnown RBP20.75■□□□□ 0.91
CCM2-205ENST00000472223 SMC5Q8IY18 1101 aa20.75■□□□□ 0.91
CCM2-205ENST00000472223 EYA3Q99504 573 aa20.75■□□□□ 0.91
CCM2-205ENST00000472223 SASH1O94885 1247 aa20.74■□□□□ 0.91
CCM2-205ENST00000472223 GPSM2P81274 684 aa20.74■□□□□ 0.91
CCM2-205ENST00000472223 UBE4AQ14139 1066 aa20.74■□□□□ 0.91
CCM2-205ENST00000472223 GPR162Q16538 588 aa20.74■□□□□ 0.91
CCM2-205ENST00000472223 C7orf43Q8WVR3 580 aa20.74■□□□□ 0.91
CCM2-205ENST00000472223 NEUROD6Q96NK8 337 aa20.74■□□□□ 0.91
CCM2-205ENST00000472223 GPR108Q9NPR9 543 aa20.74■□□□□ 0.91
CCM2-205ENST00000472223 PODXL2Q9NZ53 605 aa20.74■□□□□ 0.91
CCM2-205ENST00000472223 G3V3G9 751 aa20.73■□□□□ 0.91
CCM2-205ENST00000472223 UFL1O94874 794 aa20.73■□□□□ 0.91
CCM2-205ENST00000472223 IFIT2P09913 472 aaKnown RBP20.73■□□□□ 0.91
CCM2-205ENST00000472223 ATP2B3Q16720 1220 aa20.73■□□□□ 0.91
CCM2-205ENST00000472223 GORABQ5T7V8 394 aa20.73■□□□□ 0.91
CCM2-205ENST00000472223 DCAF8Q5TAQ9 597 aa20.73■□□□□ 0.91
CCM2-205ENST00000472223 LPIN2Q92539 896 aa20.73■□□□□ 0.91
CCM2-205ENST00000472223 ZNF804BA4D1E1 1349 aa20.73■□□□□ 0.91
CCM2-205ENST00000472223 ZC3H12CQ9C0D7 883 aaKnown RBP20.72■□□□□ 0.91
CCM2-205ENST00000472223 IL1RAPL2Q9NP60 686 aa20.72■□□□□ 0.91
CCM2-205ENST00000472223 ARFGEF1Q9Y6D6 1849 aa20.71■□□□□ 0.91
CCM2-205ENST00000472223 LRRC37AA6NMS7 1700 aa20.71■□□□□ 0.91
CCM2-205ENST00000472223 TNNI3KQ59H18 835 aa20.71■□□□□ 0.91
CCM2-205ENST00000472223 CAVIN4Q5BKX8 364 aa20.71■□□□□ 0.91
CCM2-205ENST00000472223 AACSQ86V21 672 aa20.71■□□□□ 0.91
CCM2-205ENST00000472223 VPS37DQ86XT2 251 aa20.71■□□□□ 0.91
CCM2-205ENST00000472223 FPGT-TNNI3KV9GXZ4 949 aa20.71■□□□□ 0.91
CCM2-205ENST00000472223 COL4A1P02462 1669 aa20.7■□□□□ 0.91
CCM2-205ENST00000472223 A0A1B0GUL7 405 aa20.7■□□□□ 0.9
CCM2-205ENST00000472223 GRIN3BO60391 1043 aa20.7■□□□□ 0.9
CCM2-205ENST00000472223 OLFM4Q6UX06 510 aa20.7■□□□□ 0.9
CCM2-205ENST00000472223 ARHGAP27Q6ZUM4 889 aa20.7■□□□□ 0.9
CCM2-205ENST00000472223 VGLL2Q8N8G2 317 aa20.7■□□□□ 0.9
CCM2-205ENST00000472223 TBC1D16Q8TBP0 767 aa20.7■□□□□ 0.9
CCM2-205ENST00000472223 GPATCH3Q96I76 525 aa20.7■□□□□ 0.9
CCM2-205ENST00000472223 PSMD1Q99460 953 aa20.7■□□□□ 0.9
CCM2-205ENST00000472223 TAOK3Q9H2K8 898 aa20.7■□□□□ 0.9
CCM2-205ENST00000472223 SMARCA5O60264 1052 aaPredicted RBP20.69■□□□□ 0.9
CCM2-205ENST00000472223 FKBP4Q02790 459 aaKnown RBP eCLIP20.69■□□□□ 0.9
CCM2-205ENST00000472223 NUCB1Q02818 461 aa20.69■□□□□ 0.9
CCM2-205ENST00000472223 WASHC4Q2M389 1173 aa20.69■□□□□ 0.9
CCM2-205ENST00000472223 CHD1LQ86WJ1 897 aa20.69■□□□□ 0.9
CCM2-205ENST00000472223 VPS33BQ9H267 617 aa20.69■□□□□ 0.9
CCM2-205ENST00000472223 TIMM10P62072 90 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms