RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 ECE1P42892 770 aa6.29□□□□□ -1.4
LMNB1-205ENST00000472034 SIK1P57059 783 aa6.29□□□□□ -1.4
LMNB1-205ENST00000472034 QPCTQ16769 361 aa6.29□□□□□ -1.4
LMNB1-205ENST00000472034 TMEM259Q4ZIN3 620 aa6.29□□□□□ -1.4
LMNB1-205ENST00000472034 PPP2R2DQ66LE6 453 aa6.29□□□□□ -1.4
LMNB1-205ENST00000472034 PPP1R18Q6NYC8 613 aa6.29□□□□□ -1.4
LMNB1-205ENST00000472034 FAM160A2Q8N612 972 aaPredicted RBP6.29□□□□□ -1.4
LMNB1-205ENST00000472034 UBE2Q2Q8WVN8 375 aa6.29□□□□□ -1.4
LMNB1-205ENST00000472034 PIGBQ92521 554 aa6.29□□□□□ -1.4
LMNB1-205ENST00000472034 SPTBN5Q9NRC6 3674 aaKnown RBP6.29□□□□□ -1.4
LMNB1-205ENST00000472034 SRP68Q9UHB9 627 aaKnown RBP6.29□□□□□ -1.4
LMNB1-205ENST00000472034 DICER1Q9UPY3 1922 aaKnown RBP6.29□□□□□ -1.4
LMNB1-205ENST00000472034 LAMA3Q16787 3333 aa6.28□□□□□ -1.4
LMNB1-205ENST00000472034 ITGB4P16144 1822 aa6.28□□□□□ -1.4
LMNB1-205ENST00000472034 ZBTB24O43167 697 aaPredicted RBP6.28□□□□□ -1.4
LMNB1-205ENST00000472034 CST9Q5W186 159 aa6.28□□□□□ -1.4
LMNB1-205ENST00000472034 DDX21Q9NR30 783 aaKnown RBP eCLIP6.28□□□□□ -1.4
LMNB1-205ENST00000472034 HTTP42858 3142 aa6.28□□□□□ -1.4
LMNB1-205ENST00000472034 ZNF541Q9H0D2 1346 aa6.27□□□□□ -1.41
LMNB1-205ENST00000472034 CA12O43570 354 aa6.27□□□□□ -1.41
LMNB1-205ENST00000472034 DXOO77932 396 aaKnown RBP6.27□□□□□ -1.41
LMNB1-205ENST00000472034 MAP2K2P36507 400 aa6.27□□□□□ -1.41
LMNB1-205ENST00000472034 MMP16P51512 607 aa6.27□□□□□ -1.41
LMNB1-205ENST00000472034 RTL5Q5HYW3 569 aaPredicted RBP6.27□□□□□ -1.41
LMNB1-205ENST00000472034 TRAPPC3LQ5T215 181 aa6.27□□□□□ -1.41
LMNB1-205ENST00000472034 USHBP1Q8N6Y0 703 aa6.27□□□□□ -1.41
LMNB1-205ENST00000472034 ANKLE1Q8NAG6 615 aa6.27□□□□□ -1.41
LMNB1-205ENST00000472034 CEP290O15078 2479 aa6.26□□□□□ -1.41
LMNB1-205ENST00000472034 IQCA1LA6NCM1 817 aa6.26□□□□□ -1.41
LMNB1-205ENST00000472034 CFAP99D6REC4 459 aa6.26□□□□□ -1.41
LMNB1-205ENST00000472034 RNF223E7ERA6 249 aa6.26□□□□□ -1.41
LMNB1-205ENST00000472034 AP1G2O75843 785 aa6.26□□□□□ -1.41
LMNB1-205ENST00000472034 EPHX2P34913 555 aa6.26□□□□□ -1.41
LMNB1-205ENST00000472034 RFC5P40937 340 aa6.26□□□□□ -1.41
LMNB1-205ENST00000472034 PTPRNQ16849 979 aa6.26□□□□□ -1.41
LMNB1-205ENST00000472034 CCDC24Q8N4L8 307 aa6.26□□□□□ -1.41
LMNB1-205ENST00000472034 SMARCC1Q92922 1105 aaPredicted RBP6.26□□□□□ -1.41
LMNB1-205ENST00000472034 SLC4A9Q96Q91 983 aa6.26□□□□□ -1.41
LMNB1-205ENST00000472034 ASAP1Q9ULH1 1129 aa6.26□□□□□ -1.41
LMNB1-205ENST00000472034 RTCBQ9Y3I0 505 aaKnown RBP6.26□□□□□ -1.41
LMNB1-205ENST00000472034 TLL2Q9Y6L7 1015 aa6.26□□□□□ -1.41
LMNB1-205ENST00000472034 SCN4AP35499 1836 aa6.26□□□□□ -1.41
LMNB1-205ENST00000472034 DLEC1Q9Y238 1755 aa6.26□□□□□ -1.41
LMNB1-205ENST00000472034 RNF123Q5XPI4 1314 aa6.25□□□□□ -1.41
LMNB1-205ENST00000472034 APBB1O00213 710 aa6.25□□□□□ -1.41
LMNB1-205ENST00000472034 POLRMTO00411 1230 aaKnown RBP6.25□□□□□ -1.41
LMNB1-205ENST00000472034 CYP27B1O15528 508 aa6.25□□□□□ -1.41
LMNB1-205ENST00000472034 C21orf2O43822 256 aa6.25□□□□□ -1.41
LMNB1-205ENST00000472034 CCNYL3P0C7X3 344 aa6.25□□□□□ -1.41
LMNB1-205ENST00000472034 RFC4P35249 363 aa6.25□□□□□ -1.41
LMNB1-205ENST00000472034 NME9Q86XW9 330 aa6.25□□□□□ -1.41
LMNB1-205ENST00000472034 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.25□□□□□ -1.41
LMNB1-205ENST00000472034 TTLL6Q8N841 843 aa6.25□□□□□ -1.41
LMNB1-205ENST00000472034 NUDT12Q9BQG2 462 aa6.25□□□□□ -1.41
LMNB1-205ENST00000472034 COL25A1Q9BXS0 654 aaPredicted RBP6.25□□□□□ -1.41
LMNB1-205ENST00000472034 PRDM9Q9NQV7 894 aa6.25□□□□□ -1.41
LMNB1-205ENST00000472034 FCF1Q9Y324 198 aaKnown RBP6.25□□□□□ -1.41
LMNB1-205ENST00000472034 CARMIL3Q8ND23 1372 aa6.25□□□□□ -1.41
LMNB1-205ENST00000472034 FER1L6Q2WGJ9 1857 aa6.25□□□□□ -1.41
LMNB1-205ENST00000472034 SCN11AQ9UI33 1791 aa6.24□□□□□ -1.41
LMNB1-205ENST00000472034 RGS20O76081 388 aa6.24□□□□□ -1.41
LMNB1-205ENST00000472034 FBLN1P23142 703 aa6.24□□□□□ -1.41
LMNB1-205ENST00000472034 LYPD8Q6UX82 237 aa6.24□□□□□ -1.41
LMNB1-205ENST00000472034 PNMA1Q8ND90 353 aa6.24□□□□□ -1.41
LMNB1-205ENST00000472034 BANK1Q8NDB2 785 aa6.24□□□□□ -1.41
LMNB1-205ENST00000472034 RAPGEFL1Q9UHV5 662 aa6.24□□□□□ -1.41
LMNB1-205ENST00000472034 HACL1Q9UJ83 578 aa6.24□□□□□ -1.41
LMNB1-205ENST00000472034 MYH14Q7Z406 1995 aaKnown RBP6.24□□□□□ -1.41
LMNB1-205ENST00000472034 PPEF1O14829 653 aaPredicted RBP6.23□□□□□ -1.41
LMNB1-205ENST00000472034 CTHP32929 405 aa6.23□□□□□ -1.41
LMNB1-205ENST00000472034 CTU1Q7Z7A3 348 aaKnown RBP6.23□□□□□ -1.41
LMNB1-205ENST00000472034 SAPCD2Q86UD0 394 aa6.23□□□□□ -1.41
LMNB1-205ENST00000472034 C2CD5Q86YS7 1000 aa6.23□□□□□ -1.41
LMNB1-205ENST00000472034 MPHOSPH9Q99550 1183 aa6.23□□□□□ -1.41
LMNB1-205ENST00000472034 PRM3Q9NNZ6 103 aa6.23□□□□□ -1.41
LMNB1-205ENST00000472034 TRPM7Q96QT4 1865 aa6.23□□□□□ -1.41
LMNB1-205ENST00000472034 TTC21AQ8NDW8 1320 aa6.23□□□□□ -1.41
LMNB1-205ENST00000472034 AFDNP55196 1824 aaKnown RBP6.22□□□□□ -1.41
LMNB1-205ENST00000472034 TRPA1O75762 1119 aa6.22□□□□□ -1.41
LMNB1-205ENST00000472034 CD2BP2O95400 341 aaKnown RBP6.22□□□□□ -1.41
LMNB1-205ENST00000472034 TM4SF1P30408 202 aa6.22□□□□□ -1.41
LMNB1-205ENST00000472034 NBPF6Q5VWK0 638 aa6.22□□□□□ -1.41
LMNB1-205ENST00000472034 PPARGC1BQ86YN6 1023 aaKnown RBP6.22□□□□□ -1.41
LMNB1-205ENST00000472034 IP6K1Q92551 441 aa6.22□□□□□ -1.41
LMNB1-205ENST00000472034 NBPF4Q96M43 638 aa6.22□□□□□ -1.41
LMNB1-205ENST00000472034 EVA1BQ9NVM1 165 aa6.22□□□□□ -1.41
LMNB1-205ENST00000472034 PODXL2Q9NZ53 605 aa6.22□□□□□ -1.41
LMNB1-205ENST00000472034 KDRP35968 1356 aa6.21□□□□□ -1.41
LMNB1-205ENST00000472034 USP31Q70CQ4 1352 aa6.21□□□□□ -1.41
LMNB1-205ENST00000472034 RPS6KA4O75676 772 aa6.21□□□□□ -1.42
LMNB1-205ENST00000472034 CENPBP07199 599 aaPredicted RBP6.21□□□□□ -1.42
LMNB1-205ENST00000472034 HMGB2P26583 209 aaKnown RBP6.21□□□□□ -1.42
LMNB1-205ENST00000472034 SLC19A1P41440 591 aa6.21□□□□□ -1.42
LMNB1-205ENST00000472034 RPIAP49247 311 aa6.21□□□□□ -1.42
LMNB1-205ENST00000472034 CTDSPL2Q05D32 466 aa6.21□□□□□ -1.42
LMNB1-205ENST00000472034 KCNH2Q12809 1159 aa6.21□□□□□ -1.42
LMNB1-205ENST00000472034 SYNE4Q8N205 404 aa6.21□□□□□ -1.42
LMNB1-205ENST00000472034 ARMC2Q8NEN0 867 aa6.21□□□□□ -1.42
LMNB1-205ENST00000472034 DCAF11Q8TEB1 546 aa6.21□□□□□ -1.42
LMNB1-205ENST00000472034 TAOK3Q9H2K8 898 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms