RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 WDR90Q96KV7 1748 aa11.56□□□□□ -0.56
SYN3-211ENST00000472027 GPR101Q96P66 508 aaPredicted RBP11.56□□□□□ -0.56
SYN3-211ENST00000472027 MPHOSPH8Q99549 860 aa11.56□□□□□ -0.56
SYN3-211ENST00000472027 ZC3H12CQ9C0D7 883 aaKnown RBP11.56□□□□□ -0.56
SYN3-211ENST00000472027 GGA1Q9UJY5 639 aa11.56□□□□□ -0.56
SYN3-211ENST00000472027 CHMP3Q9Y3E7 222 aa11.56□□□□□ -0.56
SYN3-211ENST00000472027 ZBED9Q6R2W3 1325 aa11.56□□□□□ -0.56
SYN3-211ENST00000472027 YDJCA8MPS7 323 aa11.55□□□□□ -0.56
SYN3-211ENST00000472027 UFL1O94874 794 aa11.55□□□□□ -0.56
SYN3-211ENST00000472027 FSTL1Q12841 308 aa11.55□□□□□ -0.56
SYN3-211ENST00000472027 DOK7Q18PE1 504 aa11.55□□□□□ -0.56
SYN3-211ENST00000472027 CCDC57Q2TAC2 916 aa11.55□□□□□ -0.56
SYN3-211ENST00000472027 SMC1BQ8NDV3 1235 aa11.55□□□□□ -0.56
SYN3-211ENST00000472027 API5Q9BZZ5 524 aaKnown RBP11.55□□□□□ -0.56
SYN3-211ENST00000472027 USP44Q9H0E7 712 aa11.55□□□□□ -0.56
SYN3-211ENST00000472027 TAF1DQ9H5J8 278 aaPredicted RBP11.55□□□□□ -0.56
SYN3-211ENST00000472027 DBNDD1Q9H9R9 158 aa11.55□□□□□ -0.56
SYN3-211ENST00000472027 HACL1Q9UJ83 578 aa11.55□□□□□ -0.56
SYN3-211ENST00000472027 XDHP47989 1333 aa11.55□□□□□ -0.56
SYN3-211ENST00000472027 LRRC37AA6NMS7 1700 aa11.55□□□□□ -0.56
SYN3-211ENST00000472027 DUOX1Q9NRD9 1551 aa11.54□□□□□ -0.56
SYN3-211ENST00000472027 WTIPA6NIX2 430 aaPredicted RBP11.54□□□□□ -0.56
SYN3-211ENST00000472027 BCAR3O75815 825 aa11.54□□□□□ -0.56
SYN3-211ENST00000472027 RAD17O75943 681 aa11.54□□□□□ -0.56
SYN3-211ENST00000472027 HSPA6P17066 643 aa11.54□□□□□ -0.56
SYN3-211ENST00000472027 EPHX2P34913 555 aa11.54□□□□□ -0.56
SYN3-211ENST00000472027 CCT4P50991 539 aaKnown RBP11.54□□□□□ -0.56
SYN3-211ENST00000472027 CIAPIN1Q6FI81 312 aa11.54□□□□□ -0.56
SYN3-211ENST00000472027 ARHGAP45Q92619 1136 aa11.54□□□□□ -0.56
SYN3-211ENST00000472027 G3V3G9 751 aa11.53□□□□□ -0.56
SYN3-211ENST00000472027 POTEIP0CG38 1075 aa11.53□□□□□ -0.56
SYN3-211ENST00000472027 POTEJP0CG39 1038 aa11.53□□□□□ -0.56
SYN3-211ENST00000472027 SCNN1DP51172 638 aa11.53□□□□□ -0.56
SYN3-211ENST00000472027 TNIP1Q15025 636 aa11.53□□□□□ -0.56
SYN3-211ENST00000472027 DCAF8Q5TAQ9 597 aa11.53□□□□□ -0.56
SYN3-211ENST00000472027 ZNF594Q96JF6 807 aaPredicted RBP11.53□□□□□ -0.56
SYN3-211ENST00000472027 ANKRD2Q9GZV1 360 aa11.53□□□□□ -0.56
SYN3-211ENST00000472027 BICC1Q9H694 974 aaKnown RBP11.53□□□□□ -0.56
SYN3-211ENST00000472027 KCNQ5Q9NR82 932 aa11.53□□□□□ -0.56
SYN3-211ENST00000472027 LEMD3Q9Y2U8 911 aa11.53□□□□□ -0.56
SYN3-211ENST00000472027 KIF16BQ96L93 1317 aa11.53□□□□□ -0.56
SYN3-211ENST00000472027 IPO8O15397 1037 aaKnown RBP11.52□□□□□ -0.57
SYN3-211ENST00000472027 ECE2O60344 883 aa11.52□□□□□ -0.57
SYN3-211ENST00000472027 LMOD1P29536 600 aaPredicted RBP11.52□□□□□ -0.57
SYN3-211ENST00000472027 EPS15P42566 896 aa11.52□□□□□ -0.57
SYN3-211ENST00000472027 CHRNDQ07001 517 aa11.52□□□□□ -0.57
SYN3-211ENST00000472027 RABL6Q3YEC7 729 aaPredicted RBP11.52□□□□□ -0.57
SYN3-211ENST00000472027 EAPPQ56P03 285 aaPredicted RBP11.52□□□□□ -0.57
SYN3-211ENST00000472027 TAF7LQ5H9L4 462 aa11.52□□□□□ -0.57
SYN3-211ENST00000472027 LDHAL6AQ6ZMR3 332 aa11.52□□□□□ -0.57
SYN3-211ENST00000472027 PNMA8AQ86V59 439 aaPredicted RBP11.52□□□□□ -0.57
SYN3-211ENST00000472027 FRAT1Q92837 279 aaPredicted RBP11.52□□□□□ -0.57
SYN3-211ENST00000472027 MYH3P11055 1940 aa11.51□□□□□ -0.57
SYN3-211ENST00000472027 PSMD14O00487 310 aa11.51□□□□□ -0.57
SYN3-211ENST00000472027 GMPSP49915 693 aaPredicted RBP11.51□□□□□ -0.57
SYN3-211ENST00000472027 CHADLQ6NUI6 762 aa11.51□□□□□ -0.57
SYN3-211ENST00000472027 LDHDQ86WU2 507 aa11.51□□□□□ -0.57
SYN3-211ENST00000472027 ANKRD44Q8N8A2 993 aa11.51□□□□□ -0.57
SYN3-211ENST00000472027 CNNM1Q9NRU3 951 aa11.51□□□□□ -0.57
SYN3-211ENST00000472027 GPRC5DQ9NZD1 345 aa11.51□□□□□ -0.57
SYN3-211ENST00000472027 CLEC11AQ9Y240 323 aa11.51□□□□□ -0.57
SYN3-211ENST00000472027 ZBTB12Q9Y330 459 aaPredicted RBP11.51□□□□□ -0.57
SYN3-211ENST00000472027 ZNF804BA4D1E1 1349 aa11.51□□□□□ -0.57
SYN3-211ENST00000472027 LTBP1Q14766 1721 aa11.51□□□□□ -0.57
SYN3-211ENST00000472027 TAF5LO75529 589 aa11.5□□□□□ -0.57
SYN3-211ENST00000472027 TRIM27P14373 513 aa11.5□□□□□ -0.57
SYN3-211ENST00000472027 INTS3Q68E01 1043 aaKnown RBP11.5□□□□□ -0.57
SYN3-211ENST00000472027 ATF7IPQ6VMQ6 1270 aa11.5□□□□□ -0.57
SYN3-211ENST00000472027 PODNQ7Z5L7 613 aa11.5□□□□□ -0.57
SYN3-211ENST00000472027 HELBQ8NG08 1087 aaPredicted RBP11.5□□□□□ -0.57
SYN3-211ENST00000472027 TNNQ9UQP3 1299 aa11.5□□□□□ -0.57
SYN3-211ENST00000472027 SCN4AP35499 1836 aa11.49□□□□□ -0.57
SYN3-211ENST00000472027 SNAP23O00161 211 aa11.49□□□□□ -0.57
SYN3-211ENST00000472027 PLIN1O60240 522 aa11.49□□□□□ -0.57
SYN3-211ENST00000472027 VIL1P09327 827 aaKnown RBP11.49□□□□□ -0.57
SYN3-211ENST00000472027 UBTFL1P0CB47 393 aaPredicted RBP11.49□□□□□ -0.57
SYN3-211ENST00000472027 KCNJ4P48050 445 aa11.49□□□□□ -0.57
SYN3-211ENST00000472027 APLP1P51693 650 aa11.49□□□□□ -0.57
SYN3-211ENST00000472027 USP50Q70EL3 339 aaPredicted RBP11.49□□□□□ -0.57
SYN3-211ENST00000472027 TXNRD3Q86VQ6 643 aa11.49□□□□□ -0.57
SYN3-211ENST00000472027 DPF2Q92785 391 aa11.49□□□□□ -0.57
SYN3-211ENST00000472027 CLUAP1Q96AJ1 413 aa11.49□□□□□ -0.57
SYN3-211ENST00000472027 PUS3Q9BZE2 481 aaKnown RBP11.49□□□□□ -0.57
SYN3-211ENST00000472027 ADARB2Q9NS39 739 aaKnown RBP11.49□□□□□ -0.57
SYN3-211ENST00000472027 CNOT7Q9UIV1 285 aaKnown RBP11.49□□□□□ -0.57
SYN3-211ENST00000472027 MED23Q9ULK4 1368 aa11.49□□□□□ -0.57
SYN3-211ENST00000472027 H7C1D1 291 aa11.48□□□□□ -0.57
SYN3-211ENST00000472027 KLRK1P26718 216 aa11.48□□□□□ -0.57
SYN3-211ENST00000472027 ZKSCAN2Q63HK3 967 aa11.48□□□□□ -0.57
SYN3-211ENST00000472027 KLHDC4Q8TBB5 520 aa11.48□□□□□ -0.57
SYN3-211ENST00000472027 MEIS3Q99687 375 aa11.48□□□□□ -0.57
SYN3-211ENST00000472027 COA1Q9GZY4 146 aa11.48□□□□□ -0.57
SYN3-211ENST00000472027 HDAC5Q9UQL6 1122 aa11.48□□□□□ -0.57
SYN3-211ENST00000472027 RIPOR2Q9Y4F9 1068 aa11.48□□□□□ -0.57
SYN3-211ENST00000472027 SHTN1A0MZ66 631 aa11.47□□□□□ -0.57
SYN3-211ENST00000472027 RPS12P25398 132 aaKnown RBP11.47□□□□□ -0.57
SYN3-211ENST00000472027 LRRC24Q50LG9 513 aa11.47□□□□□ -0.57
SYN3-211ENST00000472027 MAP1SQ66K74 1059 aaPredicted RBP11.47□□□□□ -0.57
SYN3-211ENST00000472027 C15orf52Q6ZUT6 534 aaKnown RBP11.47□□□□□ -0.57
SYN3-211ENST00000472027 MICALL2Q8IY33 904 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms