RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 SPEF2Q9C093 1822 aa12.62□□□□□ -0.39
APLF-204ENST00000471727 DISP2A7MBM2 1401 aa12.62□□□□□ -0.39
APLF-204ENST00000471727 SHANK3Q9BYB0 1731 aa12.62□□□□□ -0.39
APLF-204ENST00000471727 KDM4FA0A1W2PPD8 638 aa12.62□□□□□ -0.39
APLF-204ENST00000471727 GOLIM4O00461 696 aa12.62□□□□□ -0.39
APLF-204ENST00000471727 EXOC5O00471 708 aa12.62□□□□□ -0.39
APLF-204ENST00000471727 TIMM10P62072 90 aa12.62□□□□□ -0.39
APLF-204ENST00000471727 IFIT5Q13325 482 aaKnown RBP12.62□□□□□ -0.39
APLF-204ENST00000471727 TAF7LQ5H9L4 462 aa12.62□□□□□ -0.39
APLF-204ENST00000471727 DNAJC10Q8IXB1 793 aa12.62□□□□□ -0.39
APLF-204ENST00000471727 CTNNA3Q9UI47 895 aa12.62□□□□□ -0.39
APLF-204ENST00000471727 NSFL1CQ9UNZ2 370 aaKnown RBP12.62□□□□□ -0.39
APLF-204ENST00000471727 CNPY2Q9Y2B0 182 aa12.62□□□□□ -0.39
APLF-204ENST00000471727 LRP6O75581 1613 aa12.61□□□□□ -0.39
APLF-204ENST00000471727 ERVV-1B6SEH8 477 aa12.61□□□□□ -0.39
APLF-204ENST00000471727 KRT85P78386 507 aa12.61□□□□□ -0.39
APLF-204ENST00000471727 ST3GAL1Q11201 340 aa12.61□□□□□ -0.39
APLF-204ENST00000471727 LRRC24Q50LG9 513 aa12.61□□□□□ -0.39
APLF-204ENST00000471727 GORABQ5T7V8 394 aa12.61□□□□□ -0.39
APLF-204ENST00000471727 DHX32Q7L7V1 743 aaKnown RBP12.61□□□□□ -0.39
APLF-204ENST00000471727 AK7Q96M32 723 aa12.61□□□□□ -0.39
APLF-204ENST00000471727 LARP6Q9BRS8 491 aaKnown RBP12.61□□□□□ -0.39
APLF-204ENST00000471727 SCAND2PQ9GZW5 306 aaPredicted RBP12.61□□□□□ -0.39
APLF-204ENST00000471727 ELP1O95163 1332 aa12.61□□□□□ -0.39
APLF-204ENST00000471727 TJP1Q07157 1748 aa12.61□□□□□ -0.39
APLF-204ENST00000471727 BCL9O00512 1426 aa12.6□□□□□ -0.39
APLF-204ENST00000471727 VPS37CA5D8V6 355 aaPredicted RBP12.6□□□□□ -0.39
APLF-204ENST00000471727 GADD45BO75293 160 aaPredicted RBP12.6□□□□□ -0.39
APLF-204ENST00000471727 CYP21A2P08686 494 aa12.6□□□□□ -0.39
APLF-204ENST00000471727 TTC39AQ5SRH9 613 aa12.6□□□□□ -0.39
APLF-204ENST00000471727 ZSCAN30Q86W11 494 aa12.6□□□□□ -0.39
APLF-204ENST00000471727 FBXL16Q8N461 479 aa12.6□□□□□ -0.39
APLF-204ENST00000471727 NECAB1Q8N987 351 aa12.6□□□□□ -0.39
APLF-204ENST00000471727 GTF3C6Q969F1 213 aa12.6□□□□□ -0.39
APLF-204ENST00000471727 ZNF512BQ96KM6 892 aaPredicted RBP12.6□□□□□ -0.39
APLF-204ENST00000471727 ASAP1Q9ULH1 1129 aa12.6□□□□□ -0.39
APLF-204ENST00000471727 COL14A1Q05707 1796 aaKnown RBP12.6□□□□□ -0.39
APLF-204ENST00000471727 MCM5P33992 734 aa12.59□□□□□ -0.39
APLF-204ENST00000471727 HMGN5P82970 282 aaKnown RBP12.59□□□□□ -0.39
APLF-204ENST00000471727 ZSCAN25Q6NSZ9 544 aa12.59□□□□□ -0.39
APLF-204ENST00000471727 CHAMP1Q96JM3 812 aa12.59□□□□□ -0.39
APLF-204ENST00000471727 ZSCAN16Q9H4T2 348 aaPredicted RBP12.59□□□□□ -0.39
APLF-204ENST00000471727 CYP19A1P11511 503 aaPredicted RBP12.59□□□□□ -0.39
APLF-204ENST00000471727 IL6STP40189 918 aaPredicted RBP12.59□□□□□ -0.39
APLF-204ENST00000471727 Q6ZUG5 572 aa12.59□□□□□ -0.39
APLF-204ENST00000471727 NLRP10Q86W26 655 aa12.59□□□□□ -0.39
APLF-204ENST00000471727 ZNF594Q96JF6 807 aaPredicted RBP12.59□□□□□ -0.39
APLF-204ENST00000471727 AGXT2Q9BYV1 514 aa12.59□□□□□ -0.39
APLF-204ENST00000471727 GDPD2Q9HCC8 539 aa12.59□□□□□ -0.39
APLF-204ENST00000471727 THRAP3Q9Y2W1 955 aaKnown RBP12.59□□□□□ -0.39
APLF-204ENST00000471727 ANKRD18BA2A2Z9 1011 aa12.58□□□□□ -0.4
APLF-204ENST00000471727 PFKFB2O60825 505 aa12.58□□□□□ -0.4
APLF-204ENST00000471727 HSPD1P10809 573 aaKnown RBP12.58□□□□□ -0.4
APLF-204ENST00000471727 HSP90B1P14625 803 aaKnown RBP12.58□□□□□ -0.4
APLF-204ENST00000471727 FGD1P98174 961 aa12.58□□□□□ -0.4
APLF-204ENST00000471727 EXOSC10Q01780 885 aaKnown RBP12.58□□□□□ -0.4
APLF-204ENST00000471727 DNM1Q05193 864 aaKnown RBP12.58□□□□□ -0.4
APLF-204ENST00000471727 TTF1Q15361 905 aaPredicted RBP12.58□□□□□ -0.4
APLF-204ENST00000471727 FOXD4L6Q3SYB3 417 aaPredicted RBP12.58□□□□□ -0.4
APLF-204ENST00000471727 FOXD4L3Q6VB84 417 aaPredicted RBP12.58□□□□□ -0.4
APLF-204ENST00000471727 XAGE2Q96GT9 111 aa12.58□□□□□ -0.4
APLF-204ENST00000471727 SEC62Q99442 399 aaKnown RBP12.58□□□□□ -0.4
APLF-204ENST00000471727 PUS3Q9BZE2 481 aaKnown RBP12.58□□□□□ -0.4
APLF-204ENST00000471727 TOGARAM1Q9Y4F4 1720 aa12.57□□□□□ -0.4
APLF-204ENST00000471727 FIBPO43427 364 aa12.57□□□□□ -0.4
APLF-204ENST00000471727 PDE8AO60658 829 aa12.57□□□□□ -0.4
APLF-204ENST00000471727 MSNP26038 577 aaKnown RBP12.57□□□□□ -0.4
APLF-204ENST00000471727 ATL3Q6DD88 541 aa12.57□□□□□ -0.4
APLF-204ENST00000471727 CCDC129Q6ZRS4 1044 aa12.57□□□□□ -0.4
APLF-204ENST00000471727 SMARCC2Q8TAQ2 1214 aa12.57□□□□□ -0.4
APLF-204ENST00000471727 ZNF274Q96GC6 653 aaPredicted RBP12.57□□□□□ -0.4
APLF-204ENST00000471727 FAM89AQ96GI7 184 aa12.57□□□□□ -0.4
APLF-204ENST00000471727 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.57□□□□□ -0.4
APLF-204ENST00000471727 CCDC39Q9UFE4 941 aa12.57□□□□□ -0.4
APLF-204ENST00000471727 MAST3O60307 1309 aa12.56□□□□□ -0.4
APLF-204ENST00000471727 CTSWP56202 376 aa12.56□□□□□ -0.4
APLF-204ENST00000471727 LDHAL6AQ6ZMR3 332 aa12.56□□□□□ -0.4
APLF-204ENST00000471727 RGS22Q8NE09 1264 aa12.56□□□□□ -0.4
APLF-204ENST00000471727 TTLL11Q8NHH1 800 aa12.56□□□□□ -0.4
APLF-204ENST00000471727 APPBP2Q92624 585 aa12.56□□□□□ -0.4
APLF-204ENST00000471727 ZNF330Q9Y3S2 320 aaPredicted RBP12.56□□□□□ -0.4
APLF-204ENST00000471727 RIPOR2Q9Y4F9 1068 aa12.56□□□□□ -0.4
APLF-204ENST00000471727 TAF6LQ9Y6J9 622 aa12.56□□□□□ -0.4
APLF-204ENST00000471727 NDUFB9Q9Y6M9 179 aa12.56□□□□□ -0.4
APLF-204ENST00000471727 IRS4O14654 1257 aaPredicted RBP12.55□□□□□ -0.4
APLF-204ENST00000471727 ATP2B3Q16720 1220 aa12.55□□□□□ -0.4
APLF-204ENST00000471727 IMMTQ16891 758 aaKnown RBP12.55□□□□□ -0.4
APLF-204ENST00000471727 METTL24Q5JXM2 366 aa12.55□□□□□ -0.4
APLF-204ENST00000471727 NAA16Q6N069 864 aaPredicted RBP12.55□□□□□ -0.4
APLF-204ENST00000471727 CFAP45Q9UL16 551 aa12.55□□□□□ -0.4
APLF-204ENST00000471727 WDR19Q8NEZ3 1342 aa12.55□□□□□ -0.4
APLF-204ENST00000471727 PLCH1Q4KWH8 1693 aa12.55□□□□□ -0.4
APLF-204ENST00000471727 AHDC1Q5TGY3 1603 aaPredicted RBP12.55□□□□□ -0.4
APLF-204ENST00000471727 COL22A1Q8NFW1 1626 aaPredicted RBP12.55□□□□□ -0.4
APLF-204ENST00000471727 GOLGA6L4A6NEF3 574 aa12.55□□□□□ -0.4
APLF-204ENST00000471727 E7EWF7 191 aa12.55□□□□□ -0.4
APLF-204ENST00000471727 H3BQV1 296 aa12.55□□□□□ -0.4
APLF-204ENST00000471727 UQCRFS1P1P0C7P4 283 aa12.55□□□□□ -0.4
APLF-204ENST00000471727 ITGA6P23229 1130 aa12.55□□□□□ -0.4
APLF-204ENST00000471727 FKBP4Q02790 459 aaKnown RBP eCLIP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms