RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 DUOX1Q9NRD9 1551 aa17.47■□□□□ 0.39
SSR4-207ENST00000471724 SBF1O95248 1867 aa17.47■□□□□ 0.39
SSR4-207ENST00000471724 PNMA6EA0A0J9YXQ4 647 aa17.46■□□□□ 0.39
SSR4-207ENST00000471724 RFX5P48382 616 aaPredicted RBP17.46■□□□□ 0.39
SSR4-207ENST00000471724 POLA2Q14181 598 aa17.46■□□□□ 0.39
SSR4-207ENST00000471724 RTKN2Q8IZC4 609 aa17.46■□□□□ 0.39
SSR4-207ENST00000471724 COPRSQ9NQ92 184 aa17.46■□□□□ 0.39
SSR4-207ENST00000471724 CNNM1Q9NRU3 951 aa17.46■□□□□ 0.39
SSR4-207ENST00000471724 ARAP2Q8WZ64 1704 aa17.46■□□□□ 0.39
SSR4-207ENST00000471724 GOLGB1Q14789 3259 aaKnown RBP17.46■□□□□ 0.39
SSR4-207ENST00000471724 TIAM2Q8IVF5 1701 aa17.45■□□□□ 0.38
SSR4-207ENST00000471724 CIAO1O76071 339 aa17.45■□□□□ 0.38
SSR4-207ENST00000471724 IRX6P78412 446 aaPredicted RBP17.45■□□□□ 0.38
SSR4-207ENST00000471724 PTPN12Q05209 780 aaKnown RBP17.45■□□□□ 0.38
SSR4-207ENST00000471724 EXOC6Q8TAG9 804 aa17.45■□□□□ 0.38
SSR4-207ENST00000471724 ZNF594Q96JF6 807 aaPredicted RBP17.45■□□□□ 0.38
SSR4-207ENST00000471724 ZNF219Q9P2Y4 722 aaPredicted RBP17.45■□□□□ 0.38
SSR4-207ENST00000471724 XDHP47989 1333 aa17.45■□□□□ 0.38
SSR4-207ENST00000471724 LTBP3Q9NS15 1303 aa17.45■□□□□ 0.38
SSR4-207ENST00000471724 ANKRD2Q9GZV1 360 aa17.44■□□□□ 0.38
SSR4-207ENST00000471724 MROH5Q6ZUA9 1318 aa17.44■□□□□ 0.38
SSR4-207ENST00000471724 EYA2O00167 538 aa17.43■□□□□ 0.38
SSR4-207ENST00000471724 DPP8Q6V1X1 898 aaPredicted RBP17.43■□□□□ 0.38
SSR4-207ENST00000471724 SUPT20HQ8NEM7 779 aa17.43■□□□□ 0.38
SSR4-207ENST00000471724 KLHDC4Q8TBB5 520 aa17.43■□□□□ 0.38
SSR4-207ENST00000471724 PSMD1Q99460 953 aa17.43■□□□□ 0.38
SSR4-207ENST00000471724 TAOK3Q9H2K8 898 aa17.43■□□□□ 0.38
SSR4-207ENST00000471724 MINPP1Q9UNW1 487 aa17.43■□□□□ 0.38
SSR4-207ENST00000471724 IL15P40933 162 aaPredicted RBP17.42■□□□□ 0.38
SSR4-207ENST00000471724 FKBP4Q02790 459 aaKnown RBP eCLIP17.42■□□□□ 0.38
SSR4-207ENST00000471724 CHRNDQ07001 517 aa17.42■□□□□ 0.38
SSR4-207ENST00000471724 MPNDQ8N594 471 aa17.42■□□□□ 0.38
SSR4-207ENST00000471724 SIL1Q9H173 461 aa17.42■□□□□ 0.38
SSR4-207ENST00000471724 PODXL2Q9NZ53 605 aa17.42■□□□□ 0.38
SSR4-207ENST00000471724 ANKIB1Q9P2G1 1089 aa17.42■□□□□ 0.38
SSR4-207ENST00000471724 MYH13Q9UKX3 1938 aa17.41■□□□□ 0.38
SSR4-207ENST00000471724 HSP90AB4PQ58FF6 505 aa17.41■□□□□ 0.38
SSR4-207ENST00000471724 METTL24Q5JXM2 366 aa17.41■□□□□ 0.38
SSR4-207ENST00000471724 OLFM4Q6UX06 510 aa17.41■□□□□ 0.38
SSR4-207ENST00000471724 NSFL1CQ9UNZ2 370 aaKnown RBP17.41■□□□□ 0.38
SSR4-207ENST00000471724 PA2G4Q9UQ80 394 aaKnown RBP17.41■□□□□ 0.38
SSR4-207ENST00000471724 GPSM2P81274 684 aa17.4■□□□□ 0.38
SSR4-207ENST00000471724 G3BP1Q13283 466 aaKnown RBP eCLIP17.4■□□□□ 0.38
SSR4-207ENST00000471724 OS9Q13438 667 aaPredicted RBP17.4■□□□□ 0.38
SSR4-207ENST00000471724 LRRC24Q50LG9 513 aa17.4■□□□□ 0.38
SSR4-207ENST00000471724 C9orf131Q5VYM1 1079 aa17.4■□□□□ 0.38
SSR4-207ENST00000471724 ERC1Q8IUD2 1116 aa17.4■□□□□ 0.38
SSR4-207ENST00000471724 SIRT2Q8IXJ6 389 aa17.4■□□□□ 0.38
SSR4-207ENST00000471724 RTFDC1Q9BY42 306 aaPredicted RBP17.4■□□□□ 0.38
SSR4-207ENST00000471724 PUS3Q9BZE2 481 aaKnown RBP17.4■□□□□ 0.38
SSR4-207ENST00000471724 GGA1Q9UJY5 639 aa17.4■□□□□ 0.38
SSR4-207ENST00000471724 NOP58Q9Y2X3 529 aaKnown RBP17.4■□□□□ 0.38
SSR4-207ENST00000471724 RIPOR2Q9Y4F9 1068 aa17.4■□□□□ 0.38
SSR4-207ENST00000471724 NFKBIEO00221 500 aa17.39■□□□□ 0.37
SSR4-207ENST00000471724 SURF6O75683 361 aaKnown RBP17.39■□□□□ 0.37
SSR4-207ENST00000471724 UFL1O94874 794 aa17.39■□□□□ 0.37
SSR4-207ENST00000471724 LMNB1P20700 586 aa17.39■□□□□ 0.37
SSR4-207ENST00000471724 ATP2B4P23634 1241 aa17.39■□□□□ 0.37
SSR4-207ENST00000471724 KCNJ4P48050 445 aa17.39■□□□□ 0.37
SSR4-207ENST00000471724 EYA3Q99504 573 aa17.39■□□□□ 0.37
SSR4-207ENST00000471724 GPBP1L1Q9HC44 474 aaPredicted RBP17.39■□□□□ 0.37
SSR4-207ENST00000471724 RNF181Q9P0P0 153 aa17.39■□□□□ 0.37
SSR4-207ENST00000471724 LEMD3Q9Y2U8 911 aa17.39■□□□□ 0.37
SSR4-207ENST00000471724 PCDHB15Q9Y5E8 787 aa17.39■□□□□ 0.37
SSR4-207ENST00000471724 ZC3H4Q9UPT8 1303 aaKnown RBP17.39■□□□□ 0.37
SSR4-207ENST00000471724 PSME4Q14997 1843 aa17.38■□□□□ 0.37
SSR4-207ENST00000471724 ATG9AQ7Z3C6 839 aa17.38■□□□□ 0.37
SSR4-207ENST00000471724 SLC51AQ86UW1 340 aa17.38■□□□□ 0.37
SSR4-207ENST00000471724 VPS33BQ9H267 617 aa17.38■□□□□ 0.37
SSR4-207ENST00000471724 CEP126Q9P2H0 1117 aa17.38■□□□□ 0.37
SSR4-207ENST00000471724 MED23Q9ULK4 1368 aa17.38■□□□□ 0.37
SSR4-207ENST00000471724 C6orf229H3BNL8 230 aa17.37■□□□□ 0.37
SSR4-207ENST00000471724 PDE8BO95263 885 aa17.37■□□□□ 0.37
SSR4-207ENST00000471724 RASSF7Q02833 373 aa17.37■□□□□ 0.37
SSR4-207ENST00000471724 HDAC1Q13547 482 aaPredicted RBP17.37■□□□□ 0.37
SSR4-207ENST00000471724 VGLL2Q8N8G2 317 aa17.37■□□□□ 0.37
SSR4-207ENST00000471724 TBC1D16Q8TBP0 767 aa17.37■□□□□ 0.37
SSR4-207ENST00000471724 ZNF804BA4D1E1 1349 aa17.37■□□□□ 0.37
SSR4-207ENST00000471724 ZNF609O15014 1411 aa17.37■□□□□ 0.37
SSR4-207ENST00000471724 PUM3Q15397 648 aaKnown RBP17.36■□□□□ 0.37
SSR4-207ENST00000471724 EXOC6BQ9Y2D4 811 aa17.36■□□□□ 0.37
SSR4-207ENST00000471724 RAB11FIP3O75154 756 aa17.35■□□□□ 0.37
SSR4-207ENST00000471724 TAF5LO75529 589 aa17.35■□□□□ 0.37
SSR4-207ENST00000471724 IARSP41252 1262 aaKnown RBP17.35■□□□□ 0.37
SSR4-207ENST00000471724 UBE4AQ14139 1066 aa17.35■□□□□ 0.37
SSR4-207ENST00000471724 HELBQ8NG08 1087 aaPredicted RBP17.35■□□□□ 0.37
SSR4-207ENST00000471724 AKAP2Q9Y2D5 859 aa17.35■□□□□ 0.37
SSR4-207ENST00000471724 PPIP5K2O43314 1243 aa17.34■□□□□ 0.37
SSR4-207ENST00000471724 SLC5A1P13866 664 aa17.34■□□□□ 0.37
SSR4-207ENST00000471724 KIAA2012Q0VF49 1180 aa17.34■□□□□ 0.37
SSR4-207ENST00000471724 ATP2B3Q16720 1220 aa17.34■□□□□ 0.37
SSR4-207ENST00000471724 WASHC4Q2M389 1173 aa17.34■□□□□ 0.37
SSR4-207ENST00000471724 KDM2BQ8NHM5 1336 aa17.34■□□□□ 0.37
SSR4-207ENST00000471724 ZNF526Q8TF50 670 aaPredicted RBP17.34■□□□□ 0.37
SSR4-207ENST00000471724 KIF1BPQ96EK5 621 aa17.34■□□□□ 0.37
SSR4-207ENST00000471724 RWDD1Q9H446 243 aaPredicted RBP17.34■□□□□ 0.37
SSR4-207ENST00000471724 ZNF277Q9NRM2 450 aaPredicted RBP17.34■□□□□ 0.37
SSR4-207ENST00000471724 POLLQ9UGP5 575 aa17.34■□□□□ 0.37
SSR4-207ENST00000471724 IFIT1P09914 478 aaKnown RBP17.33■□□□□ 0.36
SSR4-207ENST00000471724 TFCP2Q12800 502 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms