RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 CDHR2Q9BYE9 1310 aa15.77■□□□□ 0.12
LINC00888-202ENST00000471496 LRRC37AA6NMS7 1700 aa15.77■□□□□ 0.11
LINC00888-202ENST00000471496 G3V3G9 751 aa15.77■□□□□ 0.11
LINC00888-202ENST00000471496 H7C1W4 665 aa15.77■□□□□ 0.11
LINC00888-202ENST00000471496 CASP7P55210 303 aa15.77■□□□□ 0.11
LINC00888-202ENST00000471496 RBM17Q96I25 401 aaKnown RBP15.77■□□□□ 0.11
LINC00888-202ENST00000471496 RARSP54136 660 aaKnown RBP15.76■□□□□ 0.11
LINC00888-202ENST00000471496 BRPF1P55201 1214 aaPredicted RBP15.76■□□□□ 0.11
LINC00888-202ENST00000471496 TIAM2Q8IVF5 1701 aa15.76■□□□□ 0.11
LINC00888-202ENST00000471496 PTPRCP08575 1304 aa15.75■□□□□ 0.11
LINC00888-202ENST00000471496 LTBP3Q9NS15 1303 aa15.75■□□□□ 0.11
LINC00888-202ENST00000471496 SMC4Q9NTJ3 1288 aa15.75■□□□□ 0.11
LINC00888-202ENST00000471496 PDE8AO60658 829 aa15.74■□□□□ 0.11
LINC00888-202ENST00000471496 C9orf131Q5VYM1 1079 aa15.74■□□□□ 0.11
LINC00888-202ENST00000471496 UBE3BQ7Z3V4 1068 aa15.74■□□□□ 0.11
LINC00888-202ENST00000471496 CCDC93Q567U6 631 aa15.73■□□□□ 0.11
LINC00888-202ENST00000471496 SOGA3Q5TF21 947 aa15.73■□□□□ 0.11
LINC00888-202ENST00000471496 ZNF784Q8NCA9 323 aaPredicted RBP15.73■□□□□ 0.11
LINC00888-202ENST00000471496 SPEF2Q9C093 1822 aa15.73■□□□□ 0.11
LINC00888-202ENST00000471496 PPEF1O14829 653 aaPredicted RBP15.72■□□□□ 0.11
LINC00888-202ENST00000471496 LMNB1P20700 586 aa15.72■□□□□ 0.11
LINC00888-202ENST00000471496 GRAPQ13588 217 aa15.72■□□□□ 0.11
LINC00888-202ENST00000471496 LTBP1Q14766 1721 aa15.72■□□□□ 0.11
LINC00888-202ENST00000471496 DDX46Q7L014 1031 aaKnown RBP15.72■□□□□ 0.11
LINC00888-202ENST00000471496 GRAPLQ8TC17 118 aaPredicted RBP15.72■□□□□ 0.11
LINC00888-202ENST00000471496 CELF1Q92879 486 aaKnown RBP15.72■□□□□ 0.11
LINC00888-202ENST00000471496 ALDH1L1O75891 902 aa15.71■□□□□ 0.11
LINC00888-202ENST00000471496 BBOX1O75936 387 aa15.71■□□□□ 0.11
LINC00888-202ENST00000471496 SLC4A10Q6U841 1118 aa15.71■□□□□ 0.11
LINC00888-202ENST00000471496 TTLL11Q8NHH1 800 aa15.71■□□□□ 0.11
LINC00888-202ENST00000471496 PLA2G12BQ9BX93 195 aa15.71■□□□□ 0.11
LINC00888-202ENST00000471496 TAOK3Q9H2K8 898 aa15.71■□□□□ 0.11
LINC00888-202ENST00000471496 RNF181Q9P0P0 153 aa15.71■□□□□ 0.11
LINC00888-202ENST00000471496 NOB1Q9ULX3 412 aaKnown RBP15.71■□□□□ 0.11
LINC00888-202ENST00000471496 ATP6V0A2Q9Y487 856 aa15.71■□□□□ 0.11
LINC00888-202ENST00000471496 DUOX1Q9NRD9 1551 aa15.71■□□□□ 0.11
LINC00888-202ENST00000471496 HSP90B1P14625 803 aaKnown RBP15.71■□□□□ 0.1
LINC00888-202ENST00000471496 CTSWP56202 376 aa15.71■□□□□ 0.1
LINC00888-202ENST00000471496 FKBP4Q02790 459 aaKnown RBP eCLIP15.71■□□□□ 0.1
LINC00888-202ENST00000471496 CC2D2BQ6DHV5 1058 aa15.71■□□□□ 0.1
LINC00888-202ENST00000471496 FAM163AQ96GL9 167 aaPredicted RBP15.71■□□□□ 0.1
LINC00888-202ENST00000471496 SRCIN1Q9C0H9 1055 aa15.71■□□□□ 0.1
LINC00888-202ENST00000471496 SEC31BQ9NQW1 1179 aa15.71■□□□□ 0.1
LINC00888-202ENST00000471496 BOLA1Q9Y3E2 137 aa15.71■□□□□ 0.1
LINC00888-202ENST00000471496 COL4A5P29400 1685 aa15.7■□□□□ 0.1
LINC00888-202ENST00000471496 GRM8O00222 908 aa15.7■□□□□ 0.1
LINC00888-202ENST00000471496 BCAR3O75815 825 aa15.7■□□□□ 0.1
LINC00888-202ENST00000471496 SP8Q8IXZ3 490 aa15.7■□□□□ 0.1
LINC00888-202ENST00000471496 RTKN2Q8IZC4 609 aa15.7■□□□□ 0.1
LINC00888-202ENST00000471496 RTL9Q8NET4 1388 aa15.69■□□□□ 0.1
LINC00888-202ENST00000471496 SNPHO15079 494 aa15.69■□□□□ 0.1
LINC00888-202ENST00000471496 CSF1RP07333 972 aa15.69■□□□□ 0.1
LINC00888-202ENST00000471496 CCDC152Q4G0S7 254 aa15.69■□□□□ 0.1
LINC00888-202ENST00000471496 CCDC85AQ96PX6 553 aaPredicted RBP15.69■□□□□ 0.1
LINC00888-202ENST00000471496 PSMD1Q99460 953 aa15.69■□□□□ 0.1
LINC00888-202ENST00000471496 UTYO14607 1347 aa15.69■□□□□ 0.1
LINC00888-202ENST00000471496 FOXO4P98177 505 aa15.68■□□□□ 0.1
LINC00888-202ENST00000471496 EPHA10Q5JZY3 1008 aa15.68■□□□□ 0.1
LINC00888-202ENST00000471496 DPY19L2Q6NUT2 758 aa15.68■□□□□ 0.1
LINC00888-202ENST00000471496 GREM2Q9H772 168 aa15.68■□□□□ 0.1
LINC00888-202ENST00000471496 NBPF7P0C2Y1 421 aaPredicted RBP15.67■□□□□ 0.1
LINC00888-202ENST00000471496 RPS8P62241 208 aaKnown RBP15.67■□□□□ 0.1
LINC00888-202ENST00000471496 KAZALD1Q96I82 304 aa15.67■□□□□ 0.1
LINC00888-202ENST00000471496 ZNF277Q9NRM2 450 aaPredicted RBP15.67■□□□□ 0.1
LINC00888-202ENST00000471496 KIF16BQ96L93 1317 aa15.67■□□□□ 0.1
LINC00888-202ENST00000471496 POTEMA6NI47 508 aa15.66■□□□□ 0.1
LINC00888-202ENST00000471496 STK25O00506 426 aa15.66■□□□□ 0.1
LINC00888-202ENST00000471496 GRIPAP1Q4V328 841 aa15.66■□□□□ 0.1
LINC00888-202ENST00000471496 TMC4Q7Z404 712 aa15.66■□□□□ 0.1
LINC00888-202ENST00000471496 ARHGAP45Q92619 1136 aa15.66■□□□□ 0.1
LINC00888-202ENST00000471496 RTFDC1Q9BY42 306 aaPredicted RBP15.66■□□□□ 0.1
LINC00888-202ENST00000471496 USP44Q9H0E7 712 aa15.66■□□□□ 0.1
LINC00888-202ENST00000471496 STK24Q9Y6E0 443 aa15.66■□□□□ 0.1
LINC00888-202ENST00000471496 ZC3H4Q9UPT8 1303 aaKnown RBP15.66■□□□□ 0.1
LINC00888-202ENST00000471496 A0A1B0GUL6 1792 aa15.66■□□□□ 0.1
LINC00888-202ENST00000471496 API5Q9BZZ5 524 aaKnown RBP15.65■□□□□ 0.1
LINC00888-202ENST00000471496 C9orf78Q9NZ63 289 aaPredicted RBP15.65■□□□□ 0.1
LINC00888-202ENST00000471496 TNNQ9UQP3 1299 aa15.65■□□□□ 0.1
LINC00888-202ENST00000471496 IARSP41252 1262 aaKnown RBP15.65■□□□□ 0.1
LINC00888-202ENST00000471496 FAM161AQ3B820 660 aa15.65■□□□□ 0.1
LINC00888-202ENST00000471496 SUCLG2Q96I99 432 aa15.65■□□□□ 0.1
LINC00888-202ENST00000471496 TRIM27P14373 513 aa15.64■□□□□ 0.09
LINC00888-202ENST00000471496 POTEGQ6S5H5 508 aa15.64■□□□□ 0.09
LINC00888-202ENST00000471496 MPNDQ8N594 471 aa15.64■□□□□ 0.09
LINC00888-202ENST00000471496 ZNF526Q8TF50 670 aaPredicted RBP15.64■□□□□ 0.09
LINC00888-202ENST00000471496 ITGA6P23229 1130 aa15.63■□□□□ 0.09
LINC00888-202ENST00000471496 CCT4P50991 539 aaKnown RBP15.63■□□□□ 0.09
LINC00888-202ENST00000471496 GPSM2P81274 684 aa15.63■□□□□ 0.09
LINC00888-202ENST00000471496 LMBR1LQ6UX01 489 aa15.63■□□□□ 0.09
LINC00888-202ENST00000471496 DPP8Q6V1X1 898 aaPredicted RBP15.63■□□□□ 0.09
LINC00888-202ENST00000471496 ANKRD18AQ8IVF6 992 aa15.63■□□□□ 0.09
LINC00888-202ENST00000471496 INTS3Q68E01 1043 aaKnown RBP15.62■□□□□ 0.09
LINC00888-202ENST00000471496 ATF7IPQ6VMQ6 1270 aa15.62■□□□□ 0.09
LINC00888-202ENST00000471496 CDC5LQ99459 802 aaKnown RBP15.62■□□□□ 0.09
LINC00888-202ENST00000471496 WDR90Q96KV7 1748 aa15.61■□□□□ 0.09
LINC00888-202ENST00000471496 GLTPD2A6NH11 291 aa15.61■□□□□ 0.09
LINC00888-202ENST00000471496 RABL6Q3YEC7 729 aaPredicted RBP15.61■□□□□ 0.09
LINC00888-202ENST00000471496 ANKRD44Q8N8A2 993 aa15.61■□□□□ 0.09
LINC00888-202ENST00000471496 FRAT1Q92837 279 aaPredicted RBP15.61■□□□□ 0.09
LINC00888-202ENST00000471496 TMEM121BQ9BXQ6 578 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms