RNA–Protein interactions for RNA: ENST00000471417.5

LINC01140-204, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 3

Gene LINC01140, Length 751 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-204ENST00000471417 TSKSQ9UJT2 592 aa12.28□□□□□ -0.44
LINC01140-204ENST00000471417 RTL9Q8NET4 1388 aa12.28□□□□□ -0.44
LINC01140-204ENST00000471417 RBM26Q5T8P6 1007 aaKnown RBP12.27□□□□□ -0.45
LINC01140-204ENST00000471417 DPF2Q92785 391 aa12.27□□□□□ -0.45
LINC01140-204ENST00000471417 PCCAP05165 728 aaPredicted RBP12.26□□□□□ -0.45
LINC01140-204ENST00000471417 CCDC191Q8NCU4 936 aa12.26□□□□□ -0.45
LINC01140-204ENST00000471417 ZIC5Q96T25 663 aa12.26□□□□□ -0.45
LINC01140-204ENST00000471417 METTL22Q9BUU2 404 aaPredicted RBP12.26□□□□□ -0.45
LINC01140-204ENST00000471417 THSD7BQ9C0I4 1608 aa12.26□□□□□ -0.45
LINC01140-204ENST00000471417 WTIPA6NIX2 430 aaPredicted RBP12.25□□□□□ -0.45
LINC01140-204ENST00000471417 PDE8AO60658 829 aa12.25□□□□□ -0.45
LINC01140-204ENST00000471417 UFL1O94874 794 aa12.25□□□□□ -0.45
LINC01140-204ENST00000471417 MAP2K2P36507 400 aa12.25□□□□□ -0.45
LINC01140-204ENST00000471417 CALD1Q05682 793 aaKnown RBP12.25□□□□□ -0.45
LINC01140-204ENST00000471417 TSR2Q969E8 191 aaKnown RBP12.25□□□□□ -0.45
LINC01140-204ENST00000471417 EYA3Q99504 573 aa12.25□□□□□ -0.45
LINC01140-204ENST00000471417 ZC3H12CQ9C0D7 883 aaKnown RBP12.25□□□□□ -0.45
LINC01140-204ENST00000471417 CWC25Q9NXE8 425 aaPredicted RBP12.25□□□□□ -0.45
LINC01140-204ENST00000471417 PODXL2Q9NZ53 605 aa12.25□□□□□ -0.45
LINC01140-204ENST00000471417 MAP3K2Q9Y2U5 619 aa12.25□□□□□ -0.45
LINC01140-204ENST00000471417 ASTN2O75129 1339 aaPredicted RBP12.25□□□□□ -0.45
LINC01140-204ENST00000471417 ADM5C9JUS6 153 aa12.24□□□□□ -0.45
LINC01140-204ENST00000471417 IGKV5-2P06315 115 aa12.24□□□□□ -0.45
LINC01140-204ENST00000471417 VIL1P09327 827 aaKnown RBP12.24□□□□□ -0.45
LINC01140-204ENST00000471417 CCDC152Q4G0S7 254 aa12.24□□□□□ -0.45
LINC01140-204ENST00000471417 CCDC30Q5VVM6 783 aa12.24□□□□□ -0.45
LINC01140-204ENST00000471417 KRT26Q7Z3Y9 468 aa12.24□□□□□ -0.45
LINC01140-204ENST00000471417 ABHD8Q96I13 439 aa12.24□□□□□ -0.45
LINC01140-204ENST00000471417 HHIPL1Q96JK4 782 aa12.24□□□□□ -0.45
LINC01140-204ENST00000471417 BEGAINQ9BUH8 593 aa12.24□□□□□ -0.45
LINC01140-204ENST00000471417 ANKIB1Q9P2G1 1089 aa12.24□□□□□ -0.45
LINC01140-204ENST00000471417 SCN9AQ15858 1988 aa12.23□□□□□ -0.45
LINC01140-204ENST00000471417 PI4KAP2A4QPH2 592 aa12.23□□□□□ -0.45
LINC01140-204ENST00000471417 RPS12P25398 132 aaKnown RBP12.23□□□□□ -0.45
LINC01140-204ENST00000471417 HUNKP57058 714 aa12.23□□□□□ -0.45
LINC01140-204ENST00000471417 G2E3Q7L622 706 aa12.23□□□□□ -0.45
LINC01140-204ENST00000471417 PI4KAP1Q8N8J0 262 aa12.23□□□□□ -0.45
LINC01140-204ENST00000471417 GGA1Q9UJY5 639 aa12.23□□□□□ -0.45
LINC01140-204ENST00000471417 DDX58O95786 925 aaKnown RBP12.22□□□□□ -0.45
LINC01140-204ENST00000471417 CWF19L2Q2TBE0 894 aaKnown RBP12.22□□□□□ -0.45
LINC01140-204ENST00000471417 KIF4BQ2VIQ3 1234 aa12.22□□□□□ -0.45
LINC01140-204ENST00000471417 KSR2Q6VAB6 950 aa12.22□□□□□ -0.45
LINC01140-204ENST00000471417 DCPSQ96C86 337 aaKnown RBP12.22□□□□□ -0.45
LINC01140-204ENST00000471417 G3V3G9 751 aa12.21□□□□□ -0.45
LINC01140-204ENST00000471417 HSP90B1P14625 803 aaKnown RBP12.21□□□□□ -0.45
LINC01140-204ENST00000471417 BRPF1P55201 1214 aaPredicted RBP12.21□□□□□ -0.45
LINC01140-204ENST00000471417 CTSWP56202 376 aa12.21□□□□□ -0.45
LINC01140-204ENST00000471417 DCAF8Q5TAQ9 597 aa12.21□□□□□ -0.45
LINC01140-204ENST00000471417 ANKRD18AQ8IVF6 992 aa12.21□□□□□ -0.45
LINC01140-204ENST00000471417 TTLL11Q8NHH1 800 aa12.21□□□□□ -0.45
LINC01140-204ENST00000471417 GREM2Q9H772 168 aa12.21□□□□□ -0.45
LINC01140-204ENST00000471417 GBA2Q9HCG7 927 aaPredicted RBP12.21□□□□□ -0.45
LINC01140-204ENST00000471417 GGA3Q9NZ52 723 aa12.21□□□□□ -0.45
LINC01140-204ENST00000471417 POLR2AP24928 1970 aaKnown RBP12.21□□□□□ -0.46
LINC01140-204ENST00000471417 XDHP47989 1333 aa12.2□□□□□ -0.46
LINC01140-204ENST00000471417 FAM155AB1AL88 458 aaPredicted RBP12.2□□□□□ -0.46
LINC01140-204ENST00000471417 RSBN1LQ6PCB5 846 aaPredicted RBP12.2□□□□□ -0.46
LINC01140-204ENST00000471417 WWC1Q8IX03 1113 aa12.2□□□□□ -0.46
LINC01140-204ENST00000471417 GMLQ99445 158 aa12.2□□□□□ -0.46
LINC01140-204ENST00000471417 NEURL1BA8MQ27 555 aa12.19□□□□□ -0.46
LINC01140-204ENST00000471417 ATP2B4P23634 1241 aa12.19□□□□□ -0.46
LINC01140-204ENST00000471417 ZNF280AP59817 542 aaPredicted RBP12.19□□□□□ -0.46
LINC01140-204ENST00000471417 NOGQ13253 232 aa12.19□□□□□ -0.46
LINC01140-204ENST00000471417 SCARF1Q14162 830 aa12.19□□□□□ -0.46
LINC01140-204ENST00000471417 TWISTNBQ3B726 338 aaPredicted RBP12.19□□□□□ -0.46
LINC01140-204ENST00000471417 RGMBQ6NW40 437 aa12.19□□□□□ -0.46
LINC01140-204ENST00000471417 C2orf69Q8N8R5 385 aa12.19□□□□□ -0.46
LINC01140-204ENST00000471417 MXD3Q9BW11 206 aa12.19□□□□□ -0.46
LINC01140-204ENST00000471417 MINPP1Q9UNW1 487 aa12.19□□□□□ -0.46
LINC01140-204ENST00000471417 SCAF8Q9UPN6 1271 aaKnown RBP12.19□□□□□ -0.46
LINC01140-204ENST00000471417 CCDC85CA6NKD9 419 aa12.18□□□□□ -0.46
LINC01140-204ENST00000471417 CA12O43570 354 aa12.18□□□□□ -0.46
LINC01140-204ENST00000471417 SLC4A2P04920 1241 aa12.18□□□□□ -0.46
LINC01140-204ENST00000471417 KIF23Q02241 960 aaPredicted RBP12.18□□□□□ -0.46
LINC01140-204ENST00000471417 CCDC27Q2M243 656 aa12.18□□□□□ -0.46
LINC01140-204ENST00000471417 ANGEL2Q5VTE6 544 aaKnown RBP12.18□□□□□ -0.46
LINC01140-204ENST00000471417 UBE3BQ7Z3V4 1068 aa12.18□□□□□ -0.46
LINC01140-204ENST00000471417 SULF1Q8IWU6 871 aa12.18□□□□□ -0.46
LINC01140-204ENST00000471417 AGBL3Q8NEM8 1001 aa12.18□□□□□ -0.46
LINC01140-204ENST00000471417 CDCA5Q96FF9 252 aa12.18□□□□□ -0.46
LINC01140-204ENST00000471417 CDC5LQ99459 802 aaKnown RBP12.18□□□□□ -0.46
LINC01140-204ENST00000471417 STK31Q9BXU1 1019 aa12.18□□□□□ -0.46
LINC01140-204ENST00000471417 USP17L3A6NCW0 530 aa12.17□□□□□ -0.46
LINC01140-204ENST00000471417 USP17L4A6NCW7 530 aa12.17□□□□□ -0.46
LINC01140-204ENST00000471417 H7C1W4 665 aa12.17□□□□□ -0.46
LINC01140-204ENST00000471417 USP17L8P0C7I0 530 aa12.17□□□□□ -0.46
LINC01140-204ENST00000471417 ZNF157P51786 506 aaPredicted RBP12.17□□□□□ -0.46
LINC01140-204ENST00000471417 NEXNQ0ZGT2 675 aa12.17□□□□□ -0.46
LINC01140-204ENST00000471417 USP17L1Q7RTZ2 530 aa12.17□□□□□ -0.46
LINC01140-204ENST00000471417 PODNQ7Z5L7 613 aa12.17□□□□□ -0.46
LINC01140-204ENST00000471417 TXNRD3Q86VQ6 643 aa12.17□□□□□ -0.46
LINC01140-204ENST00000471417 CHMP4AQ9BY43 222 aa12.17□□□□□ -0.46
LINC01140-204ENST00000471417 MCOLN1Q9GZU1 580 aa12.17□□□□□ -0.46
LINC01140-204ENST00000471417 MYOZ2Q9NPC6 264 aa12.17□□□□□ -0.46
LINC01140-204ENST00000471417 BSDC1Q9NW68 430 aaPredicted RBP12.17□□□□□ -0.46
LINC01140-204ENST00000471417 SALL2Q9Y467 1007 aaPredicted RBP12.17□□□□□ -0.46
LINC01140-204ENST00000471417 CASP8AP2Q9UKL3 1982 aa12.17□□□□□ -0.46
LINC01140-204ENST00000471417 KLRK1P26718 216 aa12.16□□□□□ -0.46
LINC01140-204ENST00000471417 CCT4P50991 539 aaKnown RBP12.16□□□□□ -0.46
LINC01140-204ENST00000471417 CASP7P55210 303 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms