RNA–Protein interactions for RNA: ENST00000471396.1

TRIM59-204, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-204ENST00000471396 ATP6V0A2Q9Y487 856 aa9.74□□□□□ -0.85
TRIM59-204ENST00000471396 PTPRCP08575 1304 aa9.74□□□□□ -0.85
TRIM59-204ENST00000471396 COL4A1P02462 1669 aa9.74□□□□□ -0.85
TRIM59-204ENST00000471396 H7C1W4 665 aa9.73□□□□□ -0.85
TRIM59-204ENST00000471396 PSEN1P49768 467 aa9.73□□□□□ -0.85
TRIM59-204ENST00000471396 CTSWP56202 376 aa9.73□□□□□ -0.85
TRIM59-204ENST00000471396 CCDC152Q4G0S7 254 aa9.73□□□□□ -0.85
TRIM59-204ENST00000471396 BEND3Q5T5X7 828 aa9.73□□□□□ -0.85
TRIM59-204ENST00000471396 UBE3BQ7Z3V4 1068 aa9.73□□□□□ -0.85
TRIM59-204ENST00000471396 SLC51AQ86UW1 340 aa9.73□□□□□ -0.85
TRIM59-204ENST00000471396 BCL2L13Q9BXK5 485 aa9.73□□□□□ -0.85
TRIM59-204ENST00000471396 ZNF277Q9NRM2 450 aaPredicted RBP9.73□□□□□ -0.85
TRIM59-204ENST00000471396 SMC4Q9NTJ3 1288 aa9.73□□□□□ -0.85
TRIM59-204ENST00000471396 ZBED9Q6R2W3 1325 aa9.73□□□□□ -0.85
TRIM59-204ENST00000471396 KDM2BQ8NHM5 1336 aa9.73□□□□□ -0.85
TRIM59-204ENST00000471396 IARSP41252 1262 aaKnown RBP9.72□□□□□ -0.85
TRIM59-204ENST00000471396 CASP7P55210 303 aa9.72□□□□□ -0.85
TRIM59-204ENST00000471396 SP8Q8IXZ3 490 aa9.72□□□□□ -0.85
TRIM59-204ENST00000471396 CELF1Q92879 486 aaKnown RBP9.72□□□□□ -0.85
TRIM59-204ENST00000471396 PLA2G12BQ9BX93 195 aa9.72□□□□□ -0.85
TRIM59-204ENST00000471396 RTL9Q8NET4 1388 aa9.72□□□□□ -0.85
TRIM59-204ENST00000471396 DUOX1Q9NRD9 1551 aa9.71□□□□□ -0.85
TRIM59-204ENST00000471396 ALDH1L1O75891 902 aa9.71□□□□□ -0.86
TRIM59-204ENST00000471396 SLC4A10Q6U841 1118 aa9.71□□□□□ -0.86
TRIM59-204ENST00000471396 SUPT20HQ8NEM7 779 aa9.71□□□□□ -0.86
TRIM59-204ENST00000471396 CCDC85AQ96PX6 553 aaPredicted RBP9.71□□□□□ -0.86
TRIM59-204ENST00000471396 SRCIN1Q9C0H9 1055 aa9.71□□□□□ -0.86
TRIM59-204ENST00000471396 SEC31BQ9NQW1 1179 aa9.71□□□□□ -0.86
TRIM59-204ENST00000471396 LTBP1Q14766 1721 aa9.7□□□□□ -0.86
TRIM59-204ENST00000471396 GLTPD2A6NH11 291 aa9.7□□□□□ -0.86
TRIM59-204ENST00000471396 GRM8O00222 908 aa9.7□□□□□ -0.86
TRIM59-204ENST00000471396 KIF3CO14782 793 aa9.7□□□□□ -0.86
TRIM59-204ENST00000471396 RARSP54136 660 aaKnown RBP9.7□□□□□ -0.86
TRIM59-204ENST00000471396 BRPF1P55201 1214 aaPredicted RBP9.7□□□□□ -0.86
TRIM59-204ENST00000471396 RPS8P62241 208 aaKnown RBP9.7□□□□□ -0.86
TRIM59-204ENST00000471396 DPP8Q6V1X1 898 aaPredicted RBP9.7□□□□□ -0.86
TRIM59-204ENST00000471396 MPNDQ8N594 471 aa9.7□□□□□ -0.86
TRIM59-204ENST00000471396 TTLL11Q8NHH1 800 aa9.7□□□□□ -0.86
TRIM59-204ENST00000471396 CDC5LQ99459 802 aaKnown RBP9.7□□□□□ -0.86
TRIM59-204ENST00000471396 RTFDC1Q9BY42 306 aaPredicted RBP9.7□□□□□ -0.86
TRIM59-204ENST00000471396 NMRK2Q9NPI5 230 aa9.7□□□□□ -0.86
TRIM59-204ENST00000471396 COL4A5P29400 1685 aa9.7□□□□□ -0.86
TRIM59-204ENST00000471396 PPIP5K2O43314 1243 aa9.69□□□□□ -0.86
TRIM59-204ENST00000471396 FAM161AQ3B820 660 aa9.69□□□□□ -0.86
TRIM59-204ENST00000471396 ANKRD18AQ8IVF6 992 aa9.69□□□□□ -0.86
TRIM59-204ENST00000471396 LARGE2Q8N3Y3 721 aa9.69□□□□□ -0.86
TRIM59-204ENST00000471396 WDR90Q96KV7 1748 aa9.69□□□□□ -0.86
TRIM59-204ENST00000471396 KIF16BQ96L93 1317 aa9.69□□□□□ -0.86
TRIM59-204ENST00000471396 SPEF2Q9C093 1822 aa9.69□□□□□ -0.86
TRIM59-204ENST00000471396 VPS33BQ9H267 617 aa9.69□□□□□ -0.86
TRIM59-204ENST00000471396 GREM2Q9H772 168 aa9.69□□□□□ -0.86
TRIM59-204ENST00000471396 C9orf78Q9NZ63 289 aaPredicted RBP9.69□□□□□ -0.86
TRIM59-204ENST00000471396 UTYO14607 1347 aa9.68□□□□□ -0.86
TRIM59-204ENST00000471396 ZNF541Q9H0D2 1346 aa9.68□□□□□ -0.86
TRIM59-204ENST00000471396 CSF1RP07333 972 aa9.68□□□□□ -0.86
TRIM59-204ENST00000471396 GPSM2P81274 684 aa9.68□□□□□ -0.86
TRIM59-204ENST00000471396 AOC3Q16853 763 aa9.68□□□□□ -0.86
TRIM59-204ENST00000471396 DPY19L2Q6NUT2 758 aa9.68□□□□□ -0.86
TRIM59-204ENST00000471396 JDP2Q8WYK2 163 aa9.68□□□□□ -0.86
TRIM59-204ENST00000471396 MS4A3Q96HJ5 214 aa9.68□□□□□ -0.86
TRIM59-204ENST00000471396 API5Q9BZZ5 524 aaKnown RBP9.68□□□□□ -0.86
TRIM59-204ENST00000471396 NOB1Q9ULX3 412 aaKnown RBP9.68□□□□□ -0.86
TRIM59-204ENST00000471396 NSFL1CQ9UNZ2 370 aaKnown RBP9.68□□□□□ -0.86
TRIM59-204ENST00000471396 FZD9O00144 591 aa9.67□□□□□ -0.86
TRIM59-204ENST00000471396 GTPBP6O43824 516 aaPredicted RBP9.67□□□□□ -0.86
TRIM59-204ENST00000471396 ITGA6P23229 1130 aa9.67□□□□□ -0.86
TRIM59-204ENST00000471396 CCT4P50991 539 aaKnown RBP9.67□□□□□ -0.86
TRIM59-204ENST00000471396 C1QTNF8P60827 252 aa9.67□□□□□ -0.86
TRIM59-204ENST00000471396 FOXO4P98177 505 aa9.67□□□□□ -0.86
TRIM59-204ENST00000471396 KIAA2012Q0VF49 1180 aa9.67□□□□□ -0.86
TRIM59-204ENST00000471396 NIM1KQ8IY84 436 aa9.67□□□□□ -0.86
TRIM59-204ENST00000471396 TSHZ2Q9NRE2 1034 aa9.67□□□□□ -0.86
TRIM59-204ENST00000471396 PODXL2Q9NZ53 605 aa9.67□□□□□ -0.86
TRIM59-204ENST00000471396 XDHP47989 1333 aa9.66□□□□□ -0.86
TRIM59-204ENST00000471396 ANKRD18BA2A2Z9 1011 aa9.66□□□□□ -0.86
TRIM59-204ENST00000471396 DDNO94850 711 aaPredicted RBP9.66□□□□□ -0.86
TRIM59-204ENST00000471396 NBPF7P0C2Y1 421 aaPredicted RBP9.66□□□□□ -0.86
TRIM59-204ENST00000471396 VEGFAP15692 232 aaPredicted RBP9.66□□□□□ -0.86
TRIM59-204ENST00000471396 IGHMBP2P38935 993 aaKnown RBP9.66□□□□□ -0.86
TRIM59-204ENST00000471396 EIF6P56537 245 aaKnown RBP9.66□□□□□ -0.86
TRIM59-204ENST00000471396 EPHA10Q5JZY3 1008 aa9.66□□□□□ -0.86
TRIM59-204ENST00000471396 C16orf71Q8IYS4 520 aaPredicted RBP9.66□□□□□ -0.86
TRIM59-204ENST00000471396 TBC1D16Q8TBP0 767 aa9.66□□□□□ -0.86
TRIM59-204ENST00000471396 ARHGAP45Q92619 1136 aa9.66□□□□□ -0.86
TRIM59-204ENST00000471396 SUCLG2Q96I99 432 aa9.66□□□□□ -0.86
TRIM59-204ENST00000471396 L3MBTL3Q96JM7 780 aaPredicted RBP9.66□□□□□ -0.86
TRIM59-204ENST00000471396 RRAGCQ9HB90 399 aa9.66□□□□□ -0.86
TRIM59-204ENST00000471396 BSDC1Q9NW68 430 aaPredicted RBP9.66□□□□□ -0.86
TRIM59-204ENST00000471396 SCN4AP35499 1836 aa9.66□□□□□ -0.86
TRIM59-204ENST00000471396 C6orf229H3BNL8 230 aa9.65□□□□□ -0.86
TRIM59-204ENST00000471396 IPO8O15397 1037 aaKnown RBP9.65□□□□□ -0.86
TRIM59-204ENST00000471396 TOMM70O94826 608 aa9.65□□□□□ -0.86
TRIM59-204ENST00000471396 UFL1O94874 794 aa9.65□□□□□ -0.86
TRIM59-204ENST00000471396 IFIT5Q13325 482 aaKnown RBP9.65□□□□□ -0.86
TRIM59-204ENST00000471396 WASHC4Q2M389 1173 aa9.65□□□□□ -0.86
TRIM59-204ENST00000471396 LMBR1LQ6UX01 489 aa9.65□□□□□ -0.86
TRIM59-204ENST00000471396 GPC2Q8N158 579 aa9.65□□□□□ -0.86
TRIM59-204ENST00000471396 KAZALD1Q96I82 304 aa9.65□□□□□ -0.86
TRIM59-204ENST00000471396 EYA3Q99504 573 aa9.65□□□□□ -0.86
TRIM59-204ENST00000471396 MPHOSPH8Q99549 860 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms