RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 UFL1O94874 794 aa19.66■□□□□ 0.74
COL1A1-203ENST00000471344 USP50Q70EL3 339 aaPredicted RBP19.66■□□□□ 0.74
COL1A1-203ENST00000471344 TTLL11Q8NHH1 800 aa19.66■□□□□ 0.74
COL1A1-203ENST00000471344 TRPM4Q8TD43 1214 aa19.66■□□□□ 0.74
COL1A1-203ENST00000471344 ADARB2Q9NS39 739 aaKnown RBP19.66■□□□□ 0.74
COL1A1-203ENST00000471344 F6X3S4 739 aa19.65■□□□□ 0.74
COL1A1-203ENST00000471344 HSP90B1P14625 803 aaKnown RBP19.65■□□□□ 0.74
COL1A1-203ENST00000471344 GCKRQ14397 625 aa19.65■□□□□ 0.74
COL1A1-203ENST00000471344 DNAAF4Q8WXU2 420 aa19.65■□□□□ 0.74
COL1A1-203ENST00000471344 BCL2L13Q9BXK5 485 aa19.65■□□□□ 0.74
COL1A1-203ENST00000471344 PODXL2Q9NZ53 605 aa19.65■□□□□ 0.74
COL1A1-203ENST00000471344 ANKIB1Q9P2G1 1089 aa19.65■□□□□ 0.74
COL1A1-203ENST00000471344 ZNF521Q96K83 1311 aa19.65■□□□□ 0.74
COL1A1-203ENST00000471344 H7C1W4 665 aa19.64■□□□□ 0.73
COL1A1-203ENST00000471344 HSPA1AP0DMV8 641 aaKnown RBP19.64■□□□□ 0.73
COL1A1-203ENST00000471344 HSPA1BP0DMV9 641 aaKnown RBP19.64■□□□□ 0.73
COL1A1-203ENST00000471344 HIRAP54198 1017 aaPredicted RBP19.64■□□□□ 0.73
COL1A1-203ENST00000471344 CASP7P55210 303 aa19.64■□□□□ 0.73
COL1A1-203ENST00000471344 TNIP1Q15025 636 aa19.64■□□□□ 0.73
COL1A1-203ENST00000471344 ANKRD18AQ8IVF6 992 aa19.64■□□□□ 0.73
COL1A1-203ENST00000471344 MICALL2Q8IY33 904 aa19.63■□□□□ 0.73
COL1A1-203ENST00000471344 EYA3Q99504 573 aa19.63■□□□□ 0.73
COL1A1-203ENST00000471344 GGA1Q9UJY5 639 aa19.63■□□□□ 0.73
COL1A1-203ENST00000471344 EGFRP00533 1210 aa19.62■□□□□ 0.73
COL1A1-203ENST00000471344 MYH16Q9H6N6 1097 aa19.62■□□□□ 0.73
COL1A1-203ENST00000471344 CNOT7Q9UIV1 285 aaKnown RBP19.62■□□□□ 0.73
COL1A1-203ENST00000471344 TRPM7Q96QT4 1865 aa19.62■□□□□ 0.73
COL1A1-203ENST00000471344 VEGFBP49765 207 aa19.61■□□□□ 0.73
COL1A1-203ENST00000471344 FAM161AQ3B820 660 aa19.61■□□□□ 0.73
COL1A1-203ENST00000471344 LINS1Q8NG48 757 aa19.61■□□□□ 0.73
COL1A1-203ENST00000471344 XDHP47989 1333 aa19.6■□□□□ 0.73
COL1A1-203ENST00000471344 COL13A1Q5TAT6 717 aaPredicted RBP19.6■□□□□ 0.73
COL1A1-203ENST00000471344 IFFO2Q5TF58 517 aa19.6■□□□□ 0.73
COL1A1-203ENST00000471344 CST9Q5W186 159 aa19.6■□□□□ 0.73
COL1A1-203ENST00000471344 SAMD7Q7Z3H4 446 aa19.6■□□□□ 0.73
COL1A1-203ENST00000471344 CDC5LQ99459 802 aaKnown RBP19.6■□□□□ 0.73
COL1A1-203ENST00000471344 GLIS2Q9BZE0 524 aaPredicted RBP19.6■□□□□ 0.73
COL1A1-203ENST00000471344 ZC3H12CQ9C0D7 883 aaKnown RBP19.6■□□□□ 0.73
COL1A1-203ENST00000471344 PSME4Q14997 1843 aa19.6■□□□□ 0.73
COL1A1-203ENST00000471344 DLK2Q6UY11 383 aa19.59■□□□□ 0.73
COL1A1-203ENST00000471344 PLA2G12BQ9BX93 195 aa19.59■□□□□ 0.73
COL1A1-203ENST00000471344 MINPP1Q9UNW1 487 aa19.59■□□□□ 0.73
COL1A1-203ENST00000471344 ZNF646O15015 1829 aaPredicted RBP19.59■□□□□ 0.73
COL1A1-203ENST00000471344 ITGA6P23229 1130 aa19.58■□□□□ 0.72
COL1A1-203ENST00000471344 TBC1D10BQ4KMP7 808 aaPredicted RBP19.58■□□□□ 0.72
COL1A1-203ENST00000471344 BEND3Q5T5X7 828 aa19.58■□□□□ 0.72
COL1A1-203ENST00000471344 BSDC1Q9NW68 430 aaPredicted RBP19.58■□□□□ 0.72
COL1A1-203ENST00000471344 ABT1Q9ULW3 272 aaKnown RBP19.58■□□□□ 0.72
COL1A1-203ENST00000471344 RASSF10A6NK89 507 aa19.57■□□□□ 0.72
COL1A1-203ENST00000471344 DPF2Q92785 391 aa19.57■□□□□ 0.72
COL1A1-203ENST00000471344 PGAP2Q9UHJ9 254 aa19.57■□□□□ 0.72
COL1A1-203ENST00000471344 A0A1B0GUL6 1792 aa19.57■□□□□ 0.72
COL1A1-203ENST00000471344 H7C1D1 291 aa19.56■□□□□ 0.72
COL1A1-203ENST00000471344 CSF1RP07333 972 aa19.56■□□□□ 0.72
COL1A1-203ENST00000471344 ATP2B4P23634 1241 aa19.56■□□□□ 0.72
COL1A1-203ENST00000471344 G3V3G9 751 aa19.55■□□□□ 0.72
COL1A1-203ENST00000471344 VIL1P09327 827 aaKnown RBP19.55■□□□□ 0.72
COL1A1-203ENST00000471344 KLRK1P26718 216 aa19.55■□□□□ 0.72
COL1A1-203ENST00000471344 FOXO4P98177 505 aa19.55■□□□□ 0.72
COL1A1-203ENST00000471344 DEFB115Q30KQ5 88 aa19.55■□□□□ 0.72
COL1A1-203ENST00000471344 EPHA10Q5JZY3 1008 aa19.55■□□□□ 0.72
COL1A1-203ENST00000471344 RBM26Q5T8P6 1007 aaKnown RBP19.55■□□□□ 0.72
COL1A1-203ENST00000471344 DCAF8Q5TAQ9 597 aa19.55■□□□□ 0.72
COL1A1-203ENST00000471344 TXNRD3Q86VQ6 643 aa19.55■□□□□ 0.72
COL1A1-203ENST00000471344 ASTN2O75129 1339 aaPredicted RBP19.54■□□□□ 0.72
COL1A1-203ENST00000471344 RPS12P25398 132 aaKnown RBP19.54■□□□□ 0.72
COL1A1-203ENST00000471344 CCT4P50991 539 aaKnown RBP19.54■□□□□ 0.72
COL1A1-203ENST00000471344 MED23Q9ULK4 1368 aa19.54■□□□□ 0.72
COL1A1-203ENST00000471344 THSD7BQ9C0I4 1608 aa19.54■□□□□ 0.72
COL1A1-203ENST00000471344 CELF2O95319 508 aaKnown RBP19.53■□□□□ 0.72
COL1A1-203ENST00000471344 IGHMBP2P38935 993 aaKnown RBP19.53■□□□□ 0.72
COL1A1-203ENST00000471344 SLC4A10Q6U841 1118 aa19.53■□□□□ 0.72
COL1A1-203ENST00000471344 USP48Q86UV5 1035 aa19.53■□□□□ 0.72
COL1A1-203ENST00000471344 ZC3H15Q8WU90 426 aaKnown RBP19.53■□□□□ 0.72
COL1A1-203ENST00000471344 MXD3Q9BW11 206 aa19.53■□□□□ 0.72
COL1A1-203ENST00000471344 ZNF408Q9H9D4 720 aa19.53■□□□□ 0.72
COL1A1-203ENST00000471344 WDR33Q9C0J8 1336 aaKnown RBP19.52■□□□□ 0.72
COL1A1-203ENST00000471344 POLR2AP24928 1970 aaKnown RBP19.52■□□□□ 0.72
COL1A1-203ENST00000471344 SNAP23O00161 211 aa19.52■□□□□ 0.72
COL1A1-203ENST00000471344 FOXN1O15353 648 aa19.52■□□□□ 0.72
COL1A1-203ENST00000471344 GRM1Q13255 1194 aa19.52■□□□□ 0.72
COL1A1-203ENST00000471344 CYP4F22Q6NT55 531 aa19.52■□□□□ 0.72
COL1A1-203ENST00000471344 RSBN1LQ6PCB5 846 aaPredicted RBP19.52■□□□□ 0.72
COL1A1-203ENST00000471344 CDCA7LQ96GN5 454 aa19.52■□□□□ 0.72
COL1A1-203ENST00000471344 TLL2Q9Y6L7 1015 aa19.52■□□□□ 0.72
COL1A1-203ENST00000471344 ZNF609O15014 1411 aa19.51■□□□□ 0.71
COL1A1-203ENST00000471344 ADM5C9JUS6 153 aa19.51■□□□□ 0.71
COL1A1-203ENST00000471344 GRM8O00222 908 aa19.51■□□□□ 0.71
COL1A1-203ENST00000471344 KIF4BQ2VIQ3 1234 aa19.51■□□□□ 0.71
COL1A1-203ENST00000471344 PAXIP1Q6ZW49 1069 aaPredicted RBP19.51■□□□□ 0.71
COL1A1-203ENST00000471344 MRPL50Q8N5N7 158 aaKnown RBP19.51■□□□□ 0.71
COL1A1-203ENST00000471344 GMLQ99445 158 aa19.51■□□□□ 0.71
COL1A1-203ENST00000471344 CHMP3Q9Y3E7 222 aa19.51■□□□□ 0.71
COL1A1-203ENST00000471344 CHRNDQ07001 517 aa19.5■□□□□ 0.71
COL1A1-203ENST00000471344 LMBR1LQ6UX01 489 aa19.5■□□□□ 0.71
COL1A1-203ENST00000471344 ZNF594Q96JF6 807 aaPredicted RBP19.5■□□□□ 0.71
COL1A1-203ENST00000471344 CAPNS2Q96L46 248 aa19.5■□□□□ 0.71
COL1A1-203ENST00000471344 MPHOSPH8Q99549 860 aa19.5■□□□□ 0.71
COL1A1-203ENST00000471344 ANKRD18BA2A2Z9 1011 aa19.49■□□□□ 0.71
COL1A1-203ENST00000471344 USP17L3A6NCW0 530 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms