RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 TSHZ2Q9NRE2 1034 aa11.31□□□□□ -0.6
PTPRE-207ENST00000471218 ZNF277Q9NRM2 450 aaPredicted RBP11.31□□□□□ -0.6
PTPRE-207ENST00000471218 WBP1LQ9NX94 342 aa11.31□□□□□ -0.6
PTPRE-207ENST00000471218 CWC25Q9NXE8 425 aaPredicted RBP11.31□□□□□ -0.6
PTPRE-207ENST00000471218 NOP58Q9Y2X3 529 aaKnown RBP11.31□□□□□ -0.6
PTPRE-207ENST00000471218 ARFGEF2Q9Y6D5 1785 aa11.31□□□□□ -0.6
PTPRE-207ENST00000471218 FOXN1O15353 648 aa11.3□□□□□ -0.6
PTPRE-207ENST00000471218 VEGFBP49765 207 aa11.3□□□□□ -0.6
PTPRE-207ENST00000471218 AIMP1Q12904 312 aaKnown RBP11.3□□□□□ -0.6
PTPRE-207ENST00000471218 TCIRG1Q13488 830 aa11.3□□□□□ -0.6
PTPRE-207ENST00000471218 GIGYF2Q6Y7W6 1299 aaKnown RBP11.3□□□□□ -0.6
PTPRE-207ENST00000471218 RPGRQ92834 1020 aaKnown RBP11.3□□□□□ -0.6
PTPRE-207ENST00000471218 AOX1Q06278 1338 aa11.3□□□□□ -0.6
PTPRE-207ENST00000471218 SLX4Q8IY92 1834 aa11.3□□□□□ -0.6
PTPRE-207ENST00000471218 ANKRD31Q8N7Z5 1873 aa11.29□□□□□ -0.6
PTPRE-207ENST00000471218 H7C1W4 665 aa11.29□□□□□ -0.6
PTPRE-207ENST00000471218 NBPF7P0C2Y1 421 aaPredicted RBP11.29□□□□□ -0.6
PTPRE-207ENST00000471218 POTEIP0CG38 1075 aa11.29□□□□□ -0.6
PTPRE-207ENST00000471218 POTEJP0CG39 1038 aa11.29□□□□□ -0.6
PTPRE-207ENST00000471218 CRY2Q49AN0 593 aa11.29□□□□□ -0.6
PTPRE-207ENST00000471218 BMP2KLQ5H9B9 411 aa11.29□□□□□ -0.6
PTPRE-207ENST00000471218 USP50Q70EL3 339 aaPredicted RBP11.29□□□□□ -0.6
PTPRE-207ENST00000471218 RBM17Q96I25 401 aaKnown RBP11.29□□□□□ -0.6
PTPRE-207ENST00000471218 MYD88Q99836 296 aa11.29□□□□□ -0.6
PTPRE-207ENST00000471218 PLA2G12BQ9BX93 195 aa11.29□□□□□ -0.6
PTPRE-207ENST00000471218 BACH2Q9BYV9 841 aa11.29□□□□□ -0.6
PTPRE-207ENST00000471218 OSBPL3Q9H4L5 887 aa11.29□□□□□ -0.6
PTPRE-207ENST00000471218 FBXO3Q9UK99 471 aa11.29□□□□□ -0.6
PTPRE-207ENST00000471218 ABT1Q9ULW3 272 aaKnown RBP11.29□□□□□ -0.6
PTPRE-207ENST00000471218 SRGAP3O43295 1099 aa11.28□□□□□ -0.6
PTPRE-207ENST00000471218 HOXA10P31260 410 aaPredicted RBP11.28□□□□□ -0.6
PTPRE-207ENST00000471218 CASP7P55210 303 aa11.28□□□□□ -0.6
PTPRE-207ENST00000471218 CWF19L2Q2TBE0 894 aaKnown RBP11.28□□□□□ -0.6
PTPRE-207ENST00000471218 PARP10Q53GL7 1025 aa11.28□□□□□ -0.6
PTPRE-207ENST00000471218 ANKRD45Q5TZF3 282 aa11.28□□□□□ -0.6
PTPRE-207ENST00000471218 PPP1R42Q7Z4L9 355 aa11.28□□□□□ -0.6
PTPRE-207ENST00000471218 SUPT20HQ8NEM7 779 aa11.28□□□□□ -0.6
PTPRE-207ENST00000471218 KIF1BPQ96EK5 621 aa11.28□□□□□ -0.6
PTPRE-207ENST00000471218 CRAMP1Q96RY5 1269 aa11.28□□□□□ -0.6
PTPRE-207ENST00000471218 LRRCC1Q9C099 1032 aa11.28□□□□□ -0.6
PTPRE-207ENST00000471218 CDHR2Q9BYE9 1310 aa11.28□□□□□ -0.6
PTPRE-207ENST00000471218 CA12O43570 354 aa11.27□□□□□ -0.61
PTPRE-207ENST00000471218 PCCAP05165 728 aaPredicted RBP11.27□□□□□ -0.61
PTPRE-207ENST00000471218 PDE4AP27815 886 aa11.27□□□□□ -0.61
PTPRE-207ENST00000471218 TTLL7Q6ZT98 887 aa11.27□□□□□ -0.61
PTPRE-207ENST00000471218 LARGE2Q8N3Y3 721 aa11.27□□□□□ -0.61
PTPRE-207ENST00000471218 NLRP3Q96P20 1036 aa11.27□□□□□ -0.61
PTPRE-207ENST00000471218 WDR33Q9C0J8 1336 aaKnown RBP11.27□□□□□ -0.61
PTPRE-207ENST00000471218 PNMA6EA0A0J9YXQ4 647 aa11.26□□□□□ -0.61
PTPRE-207ENST00000471218 FAM177BA6PVY3 158 aa11.26□□□□□ -0.61
PTPRE-207ENST00000471218 MAP2K2P36507 400 aa11.26□□□□□ -0.61
PTPRE-207ENST00000471218 RGS3P49796 1198 aa11.26□□□□□ -0.61
PTPRE-207ENST00000471218 LBX1P52954 281 aa11.26□□□□□ -0.61
PTPRE-207ENST00000471218 NIM1KQ8IY84 436 aa11.26□□□□□ -0.61
PTPRE-207ENST00000471218 ZBTB38Q8NAP3 1195 aaPredicted RBP11.26□□□□□ -0.61
PTPRE-207ENST00000471218 LNPKQ9C0E8 428 aa11.26□□□□□ -0.61
PTPRE-207ENST00000471218 COPRSQ9NQ92 184 aa11.26□□□□□ -0.61
PTPRE-207ENST00000471218 GJA3Q9Y6H8 435 aa11.26□□□□□ -0.61
PTPRE-207ENST00000471218 ZNF541Q9H0D2 1346 aa11.26□□□□□ -0.61
PTPRE-207ENST00000471218 RIC1Q4ADV7 1423 aa11.26□□□□□ -0.61
PTPRE-207ENST00000471218 PIP4K2AP48426 406 aaPredicted RBP11.25□□□□□ -0.61
PTPRE-207ENST00000471218 HLFQ16534 295 aa11.25□□□□□ -0.61
PTPRE-207ENST00000471218 MAP1SQ66K74 1059 aaPredicted RBP11.25□□□□□ -0.61
PTPRE-207ENST00000471218 SUCLG2Q96I99 432 aa11.25□□□□□ -0.61
PTPRE-207ENST00000471218 ADARB2Q9NS39 739 aaKnown RBP11.25□□□□□ -0.61
PTPRE-207ENST00000471218 STAP2Q9UGK3 403 aa11.25□□□□□ -0.61
PTPRE-207ENST00000471218 COL11A2P13942 1736 aaPredicted RBP11.25□□□□□ -0.61
PTPRE-207ENST00000471218 BCORQ6W2J9 1755 aa11.25□□□□□ -0.61
PTPRE-207ENST00000471218 BBOX1O75936 387 aa11.24□□□□□ -0.61
PTPRE-207ENST00000471218 C8orf34Q49A92 452 aa11.24□□□□□ -0.61
PTPRE-207ENST00000471218 TICAM2Q86XR7 235 aa11.24□□□□□ -0.61
PTPRE-207ENST00000471218 ZNF34Q8IZ26 560 aa11.24□□□□□ -0.61
PTPRE-207ENST00000471218 ZC3H15Q8WU90 426 aaKnown RBP11.24□□□□□ -0.61
PTPRE-207ENST00000471218 KAZALD1Q96I82 304 aa11.24□□□□□ -0.61
PTPRE-207ENST00000471218 HHIPL1Q96JK4 782 aa11.24□□□□□ -0.61
PTPRE-207ENST00000471218 GPR101Q96P66 508 aaPredicted RBP11.24□□□□□ -0.61
PTPRE-207ENST00000471218 ZBTB3Q9H5J0 574 aa11.24□□□□□ -0.61
PTPRE-207ENST00000471218 BICC1Q9H694 974 aaKnown RBP11.24□□□□□ -0.61
PTPRE-207ENST00000471218 SALL3Q9BXA9 1300 aa11.24□□□□□ -0.61
PTPRE-207ENST00000471218 PPEF1O14829 653 aaPredicted RBP11.23□□□□□ -0.61
PTPRE-207ENST00000471218 SURF6O75683 361 aaKnown RBP11.23□□□□□ -0.61
PTPRE-207ENST00000471218 TNIP1Q15025 636 aa11.23□□□□□ -0.61
PTPRE-207ENST00000471218 PAXIP1Q6ZW49 1069 aaPredicted RBP11.23□□□□□ -0.61
PTPRE-207ENST00000471218 UBE3BQ7Z3V4 1068 aa11.23□□□□□ -0.61
PTPRE-207ENST00000471218 TMC4Q7Z404 712 aa11.23□□□□□ -0.61
PTPRE-207ENST00000471218 NLRP10Q86W26 655 aa11.23□□□□□ -0.61
PTPRE-207ENST00000471218 PLEKHM2Q8IWE5 1019 aa11.23□□□□□ -0.61
PTPRE-207ENST00000471218 CAPNS2Q96L46 248 aa11.23□□□□□ -0.61
PTPRE-207ENST00000471218 RTL9Q8NET4 1388 aa11.23□□□□□ -0.61
PTPRE-207ENST00000471218 PPIP5K2O43314 1243 aa11.22□□□□□ -0.61
PTPRE-207ENST00000471218 CIAO1O76071 339 aa11.22□□□□□ -0.61
PTPRE-207ENST00000471218 HSPA8P11142 646 aaKnown RBP11.22□□□□□ -0.61
PTPRE-207ENST00000471218 ANKRD36CQ5JPF3 1778 aa11.22□□□□□ -0.61
PTPRE-207ENST00000471218 SLC10A5Q5PT55 438 aa11.22□□□□□ -0.61
PTPRE-207ENST00000471218 TTC41PQ6P2S7 1318 aa11.22□□□□□ -0.61
PTPRE-207ENST00000471218 NUTM1Q86Y26 1132 aa11.22□□□□□ -0.61
PTPRE-207ENST00000471218 CLASRPQ8N2M8 674 aaKnown RBP11.22□□□□□ -0.61
PTPRE-207ENST00000471218 RHPN1Q8TCX5 695 aa11.22□□□□□ -0.61
PTPRE-207ENST00000471218 ABHD8Q96I13 439 aa11.22□□□□□ -0.61
PTPRE-207ENST00000471218 GPATCH3Q96I76 525 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms