RNA–Protein interactions for RNA: ENST00000470543.1

HIGD1A-205, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2

Gene HIGD1A, Length 983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-205ENST00000470543 PAPPA2Q9BXP8 1791 aa16.36■□□□□ 0.21
HIGD1A-205ENST00000470543 RTL9Q8NET4 1388 aa16.36■□□□□ 0.21
HIGD1A-205ENST00000470543 GPSM2P81274 684 aa16.35■□□□□ 0.21
HIGD1A-205ENST00000470543 LMOD3Q0VAK6 560 aa16.35■□□□□ 0.21
HIGD1A-205ENST00000470543 CELF1Q92879 486 aaKnown RBP16.35■□□□□ 0.21
HIGD1A-205ENST00000470543 CSRNP1Q96S65 589 aa16.35■□□□□ 0.21
HIGD1A-205ENST00000470543 SCN9AQ15858 1988 aa16.35■□□□□ 0.21
HIGD1A-205ENST00000470543 RASAL3Q86YV0 1011 aa16.34■□□□□ 0.21
HIGD1A-205ENST00000470543 ZC3H12CQ9C0D7 883 aaKnown RBP16.34■□□□□ 0.21
HIGD1A-205ENST00000470543 POLLQ9UGP5 575 aa16.34■□□□□ 0.21
HIGD1A-205ENST00000470543 HPS5Q9UPZ3 1129 aa16.34■□□□□ 0.21
HIGD1A-205ENST00000470543 RIPK4P57078 832 aa16.33■□□□□ 0.2
HIGD1A-205ENST00000470543 PKN2Q16513 984 aaKnown RBP16.33■□□□□ 0.2
HIGD1A-205ENST00000470543 RTL5Q5HYW3 569 aaPredicted RBP16.33■□□□□ 0.2
HIGD1A-205ENST00000470543 ANGEL2Q5VTE6 544 aaKnown RBP16.33■□□□□ 0.2
HIGD1A-205ENST00000470543 FAM89AQ96GI7 184 aa16.33■□□□□ 0.2
HIGD1A-205ENST00000470543 KCNQ5Q9NR82 932 aa16.33■□□□□ 0.2
HIGD1A-205ENST00000470543 BABAM1Q9NWV8 329 aa16.33■□□□□ 0.2
HIGD1A-205ENST00000470543 ASTN2O75129 1339 aaPredicted RBP16.32■□□□□ 0.2
HIGD1A-205ENST00000470543 UFL1O94874 794 aa16.32■□□□□ 0.2
HIGD1A-205ENST00000470543 FKBP1BP68106 108 aa16.32■□□□□ 0.2
HIGD1A-205ENST00000470543 PSME4Q14997 1843 aa16.32■□□□□ 0.2
HIGD1A-205ENST00000470543 TBC1D16Q8TBP0 767 aa16.32■□□□□ 0.2
HIGD1A-205ENST00000470543 ANKIB1Q9P2G1 1089 aa16.32■□□□□ 0.2
HIGD1A-205ENST00000470543 TTLL12Q14166 644 aaPredicted RBP16.31■□□□□ 0.2
HIGD1A-205ENST00000470543 SF3B3Q15393 1217 aaKnown RBP16.31■□□□□ 0.2
HIGD1A-205ENST00000470543 PLBD2Q8NHP8 589 aa16.31■□□□□ 0.2
HIGD1A-205ENST00000470543 CHPF2Q9P2E5 772 aa16.31■□□□□ 0.2
HIGD1A-205ENST00000470543 ATP5J2-PTCD1G3V325 749 aa16.3■□□□□ 0.2
HIGD1A-205ENST00000470543 VIL1P09327 827 aaKnown RBP16.3■□□□□ 0.2
HIGD1A-205ENST00000470543 SCARF1Q14162 830 aa16.3■□□□□ 0.2
HIGD1A-205ENST00000470543 HDGFL1Q5TGJ6 251 aa16.3■□□□□ 0.2
HIGD1A-205ENST00000470543 GGA1Q9UJY5 639 aa16.3■□□□□ 0.2
HIGD1A-205ENST00000470543 LAS1LQ9Y4W2 734 aaKnown RBP16.3■□□□□ 0.2
HIGD1A-205ENST00000470543 COL4A1P02462 1669 aa16.3■□□□□ 0.2
HIGD1A-205ENST00000470543 IRS4O14654 1257 aaPredicted RBP16.29■□□□□ 0.2
HIGD1A-205ENST00000470543 RPS8P62241 208 aaKnown RBP16.29■□□□□ 0.2
HIGD1A-205ENST00000470543 RSBN1LQ6PCB5 846 aaPredicted RBP16.29■□□□□ 0.2
HIGD1A-205ENST00000470543 ANKRD13DQ6ZTN6 518 aa16.29■□□□□ 0.2
HIGD1A-205ENST00000470543 AGBL3Q8NEM8 1001 aa16.29■□□□□ 0.2
HIGD1A-205ENST00000470543 ZNF296Q8WUU4 475 aaPredicted RBP16.29■□□□□ 0.2
HIGD1A-205ENST00000470543 TBC1D8O95759 1140 aa16.28■□□□□ 0.2
HIGD1A-205ENST00000470543 HSP90B1P14625 803 aaKnown RBP16.28■□□□□ 0.2
HIGD1A-205ENST00000470543 NF2P35240 595 aa16.28■□□□□ 0.2
HIGD1A-205ENST00000470543 GCC1Q96CN9 775 aa16.28■□□□□ 0.2
HIGD1A-205ENST00000470543 ZNF609O15014 1411 aa16.28■□□□□ 0.2
HIGD1A-205ENST00000470543 PITPNM2Q9BZ72 1349 aa16.27■□□□□ 0.2
HIGD1A-205ENST00000470543 USP17L8P0C7I0 530 aa16.27■□□□□ 0.2
HIGD1A-205ENST00000470543 ZNF280AP59817 542 aaPredicted RBP16.27■□□□□ 0.2
HIGD1A-205ENST00000470543 ISCA1Q9BUE6 129 aa16.27■□□□□ 0.2
HIGD1A-205ENST00000470543 MYOZ2Q9NPC6 264 aa16.27■□□□□ 0.2
HIGD1A-205ENST00000470543 SREBF2Q12772 1141 aa16.26■□□□□ 0.19
HIGD1A-205ENST00000470543 MKRN3Q13064 507 aaKnown RBP16.26■□□□□ 0.19
HIGD1A-205ENST00000470543 NEUROD2Q15784 382 aa16.26■□□□□ 0.19
HIGD1A-205ENST00000470543 KRT24Q2M2I5 525 aa16.26■□□□□ 0.19
HIGD1A-205ENST00000470543 FBXO46Q6PJ61 603 aaPredicted RBP16.26■□□□□ 0.19
HIGD1A-205ENST00000470543 PODXL2Q9NZ53 605 aa16.26■□□□□ 0.19
HIGD1A-205ENST00000470543 DBF4Q9UBU7 674 aaPredicted RBP16.26■□□□□ 0.19
HIGD1A-205ENST00000470543 UBE2Q2LH0YL09 131 aa16.25■□□□□ 0.19
HIGD1A-205ENST00000470543 TMPOP42166 694 aaKnown RBP16.25■□□□□ 0.19
HIGD1A-205ENST00000470543 MOB2Q70IA6 237 aa16.25■□□□□ 0.19
HIGD1A-205ENST00000470543 FBXW7Q969H0 707 aa16.25■□□□□ 0.19
HIGD1A-205ENST00000470543 SCAF8Q9UPN6 1271 aaKnown RBP16.25■□□□□ 0.19
HIGD1A-205ENST00000470543 GPR25O00155 361 aa16.24■□□□□ 0.19
HIGD1A-205ENST00000470543 GOLGA2Q08379 1002 aa16.24■□□□□ 0.19
HIGD1A-205ENST00000470543 CCDC152Q4G0S7 254 aa16.24■□□□□ 0.19
HIGD1A-205ENST00000470543 RIC3Q7Z5B4 369 aa16.24■□□□□ 0.19
HIGD1A-205ENST00000470543 SEC31BQ9NQW1 1179 aa16.24■□□□□ 0.19
HIGD1A-205ENST00000470543 HYPKQ9NX55 129 aa16.24■□□□□ 0.19
HIGD1A-205ENST00000470543 SPEF2Q9C093 1822 aa16.24■□□□□ 0.19
HIGD1A-205ENST00000470543 XDHP47989 1333 aa16.23■□□□□ 0.19
HIGD1A-205ENST00000470543 USP17L3A6NCW0 530 aa16.23■□□□□ 0.19
HIGD1A-205ENST00000470543 USP17L4A6NCW7 530 aa16.23■□□□□ 0.19
HIGD1A-205ENST00000470543 HOXB7P09629 217 aa16.23■□□□□ 0.19
HIGD1A-205ENST00000470543 USP17L1Q7RTZ2 530 aa16.23■□□□□ 0.19
HIGD1A-205ENST00000470543 ZBTB38Q8NAP3 1195 aaPredicted RBP16.23■□□□□ 0.19
HIGD1A-205ENST00000470543 FKTNO75072 461 aa16.22■□□□□ 0.19
HIGD1A-205ENST00000470543 PRAMEF18Q5VWM3 479 aa16.22■□□□□ 0.19
HIGD1A-205ENST00000470543 ANKRD18AQ8IVF6 992 aa16.22■□□□□ 0.19
HIGD1A-205ENST00000470543 OGFOD1Q8N543 542 aa16.22■□□□□ 0.19
HIGD1A-205ENST00000470543 CCDC85AQ96PX6 553 aaPredicted RBP16.22■□□□□ 0.19
HIGD1A-205ENST00000470543 ATP2B4P23634 1241 aa16.21■□□□□ 0.19
HIGD1A-205ENST00000470543 NOM1Q5C9Z4 860 aaKnown RBP16.21■□□□□ 0.19
HIGD1A-205ENST00000470543 ARMC9Q7Z3E5 817 aa16.21■□□□□ 0.19
HIGD1A-205ENST00000470543 PODNQ7Z5L7 613 aa16.21■□□□□ 0.19
HIGD1A-205ENST00000470543 CHL1O00533 1208 aa16.2■□□□□ 0.18
HIGD1A-205ENST00000470543 TM4SF4P48230 202 aa16.2■□□□□ 0.18
HIGD1A-205ENST00000470543 PRKG1Q13976 671 aa16.2■□□□□ 0.18
HIGD1A-205ENST00000470543 CCDC146Q8IYE0 955 aa16.2■□□□□ 0.18
HIGD1A-205ENST00000470543 MYD88Q99836 296 aa16.2■□□□□ 0.18
HIGD1A-205ENST00000470543 MYH3P11055 1940 aa16.19■□□□□ 0.18
HIGD1A-205ENST00000470543 PDE8AO60658 829 aa16.19■□□□□ 0.18
HIGD1A-205ENST00000470543 TRIM28Q13263 835 aaKnown RBP16.19■□□□□ 0.18
HIGD1A-205ENST00000470543 NBPF9Q3BBW0 867 aa16.19■□□□□ 0.18
HIGD1A-205ENST00000470543 GMLQ99445 158 aa16.19■□□□□ 0.18
HIGD1A-205ENST00000470543 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.19■□□□□ 0.18
HIGD1A-205ENST00000470543 MYO3BQ8WXR4 1341 aa16.19■□□□□ 0.18
HIGD1A-205ENST00000470543 MED23Q9ULK4 1368 aa16.18■□□□□ 0.18
HIGD1A-205ENST00000470543 ALDH1A1P00352 501 aa16.18■□□□□ 0.18
HIGD1A-205ENST00000470543 DUSP27Q5VZP5 1158 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms