RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 ZBED9Q6R2W3 1325 aa17.88■□□□□ 0.45
TOP3B-215ENST00000470338 IGHMBP2P38935 993 aaKnown RBP17.87■□□□□ 0.45
TOP3B-215ENST00000470338 LMBR1LQ6UX01 489 aa17.87■□□□□ 0.45
TOP3B-215ENST00000470338 KAZALD1Q96I82 304 aa17.87■□□□□ 0.45
TOP3B-215ENST00000470338 GGA1Q9UJY5 639 aa17.87■□□□□ 0.45
TOP3B-215ENST00000470338 GJA3Q9Y6H8 435 aa17.87■□□□□ 0.45
TOP3B-215ENST00000470338 ANKRD18BA2A2Z9 1011 aa17.86■□□□□ 0.45
TOP3B-215ENST00000470338 YDJCA8MPS7 323 aa17.86■□□□□ 0.45
TOP3B-215ENST00000470338 RIMBP2O15034 1052 aa17.86■□□□□ 0.45
TOP3B-215ENST00000470338 UFL1O94874 794 aa17.86■□□□□ 0.45
TOP3B-215ENST00000470338 HSPA6P17066 643 aa17.86■□□□□ 0.45
TOP3B-215ENST00000470338 IFIT5Q13325 482 aaKnown RBP17.86■□□□□ 0.45
TOP3B-215ENST00000470338 SMC1BQ8NDV3 1235 aa17.86■□□□□ 0.45
TOP3B-215ENST00000470338 ARHGAP45Q92619 1136 aa17.86■□□□□ 0.45
TOP3B-215ENST00000470338 SUCLG2Q96I99 432 aa17.86■□□□□ 0.45
TOP3B-215ENST00000470338 USP44Q9H0E7 712 aa17.86■□□□□ 0.45
TOP3B-215ENST00000470338 TAF1DQ9H5J8 278 aaPredicted RBP17.86■□□□□ 0.45
TOP3B-215ENST00000470338 HACL1Q9UJ83 578 aa17.86■□□□□ 0.45
TOP3B-215ENST00000470338 ATP2B4P23634 1241 aa17.85■□□□□ 0.45
TOP3B-215ENST00000470338 SCN9AQ15858 1988 aa17.85■□□□□ 0.45
TOP3B-215ENST00000470338 GPR101Q96P66 508 aaPredicted RBP17.85■□□□□ 0.45
TOP3B-215ENST00000470338 MPHOSPH8Q99549 860 aa17.85■□□□□ 0.45
TOP3B-215ENST00000470338 API5Q9BZZ5 524 aaKnown RBP17.85■□□□□ 0.45
TOP3B-215ENST00000470338 ZC3H12CQ9C0D7 883 aaKnown RBP17.85■□□□□ 0.45
TOP3B-215ENST00000470338 A0A1B0GUL6 1792 aa17.84■□□□□ 0.45
TOP3B-215ENST00000470338 KIF16BQ96L93 1317 aa17.84■□□□□ 0.45
TOP3B-215ENST00000470338 CCT4P50991 539 aaKnown RBP17.84■□□□□ 0.45
TOP3B-215ENST00000470338 SCNN1DP51172 638 aa17.84■□□□□ 0.45
TOP3B-215ENST00000470338 TNIP1Q15025 636 aa17.84■□□□□ 0.45
TOP3B-215ENST00000470338 CIAPIN1Q6FI81 312 aa17.84■□□□□ 0.45
TOP3B-215ENST00000470338 CEP350Q5VT06 3117 aa17.84■□□□□ 0.45
TOP3B-215ENST00000470338 PSME4Q14997 1843 aa17.84■□□□□ 0.45
TOP3B-215ENST00000470338 ADAMTSL1Q8N6G6 1762 aa17.84■□□□□ 0.45
TOP3B-215ENST00000470338 WTIPA6NIX2 430 aaPredicted RBP17.83■□□□□ 0.44
TOP3B-215ENST00000470338 EPHX2P34913 555 aa17.83■□□□□ 0.44
TOP3B-215ENST00000470338 CCDC57Q2TAC2 916 aa17.83■□□□□ 0.44
TOP3B-215ENST00000470338 RABL6Q3YEC7 729 aaPredicted RBP17.83■□□□□ 0.44
TOP3B-215ENST00000470338 ANKRD2Q9GZV1 360 aa17.83■□□□□ 0.44
TOP3B-215ENST00000470338 DBNDD1Q9H9R9 158 aa17.83■□□□□ 0.44
TOP3B-215ENST00000470338 CHMP3Q9Y3E7 222 aa17.83■□□□□ 0.44
TOP3B-215ENST00000470338 ECE2O60344 883 aa17.82■□□□□ 0.44
TOP3B-215ENST00000470338 RAD17O75943 681 aa17.82■□□□□ 0.44
TOP3B-215ENST00000470338 POTEIP0CG38 1075 aa17.82■□□□□ 0.44
TOP3B-215ENST00000470338 POTEJP0CG39 1038 aa17.82■□□□□ 0.44
TOP3B-215ENST00000470338 DOK7Q18PE1 504 aa17.82■□□□□ 0.44
TOP3B-215ENST00000470338 PNMA8AQ86V59 439 aaPredicted RBP17.82■□□□□ 0.44
TOP3B-215ENST00000470338 BICC1Q9H694 974 aaKnown RBP17.82■□□□□ 0.44
TOP3B-215ENST00000470338 LEMD3Q9Y2U8 911 aa17.82■□□□□ 0.44
TOP3B-215ENST00000470338 BCAR3O75815 825 aa17.81■□□□□ 0.44
TOP3B-215ENST00000470338 LMOD1P29536 600 aaPredicted RBP17.81■□□□□ 0.44
TOP3B-215ENST00000470338 EPS15P42566 896 aa17.81■□□□□ 0.44
TOP3B-215ENST00000470338 CHRNDQ07001 517 aa17.81■□□□□ 0.44
TOP3B-215ENST00000470338 CHADLQ6NUI6 762 aa17.81■□□□□ 0.44
TOP3B-215ENST00000470338 LDHDQ86WU2 507 aa17.81■□□□□ 0.44
TOP3B-215ENST00000470338 ANKRD44Q8N8A2 993 aa17.81■□□□□ 0.44
TOP3B-215ENST00000470338 GPRC5DQ9NZD1 345 aa17.81■□□□□ 0.44
TOP3B-215ENST00000470338 MED23Q9ULK4 1368 aa17.8■□□□□ 0.44
TOP3B-215ENST00000470338 IPO8O15397 1037 aaKnown RBP17.8■□□□□ 0.44
TOP3B-215ENST00000470338 GMPSP49915 693 aaPredicted RBP17.8■□□□□ 0.44
TOP3B-215ENST00000470338 ZNF594Q96JF6 807 aaPredicted RBP17.8■□□□□ 0.44
TOP3B-215ENST00000470338 KCNQ5Q9NR82 932 aa17.8■□□□□ 0.44
TOP3B-215ENST00000470338 PSMD14O00487 310 aa17.79■□□□□ 0.44
TOP3B-215ENST00000470338 APLP1P51693 650 aa17.79■□□□□ 0.44
TOP3B-215ENST00000470338 INTS3Q68E01 1043 aaKnown RBP17.79■□□□□ 0.44
TOP3B-215ENST00000470338 LDHAL6AQ6ZMR3 332 aa17.79■□□□□ 0.44
TOP3B-215ENST00000470338 ZNF804BA4D1E1 1349 aa17.78■□□□□ 0.44
TOP3B-215ENST00000470338 G3V3G9 751 aa17.78■□□□□ 0.44
TOP3B-215ENST00000470338 EAPPQ56P03 285 aaPredicted RBP17.78■□□□□ 0.44
TOP3B-215ENST00000470338 TAF7LQ5H9L4 462 aa17.78■□□□□ 0.44
TOP3B-215ENST00000470338 DCAF8Q5TAQ9 597 aa17.78■□□□□ 0.44
TOP3B-215ENST00000470338 USP50Q70EL3 339 aaPredicted RBP17.78■□□□□ 0.44
TOP3B-215ENST00000470338 PODNQ7Z5L7 613 aa17.78■□□□□ 0.44
TOP3B-215ENST00000470338 VIL1P09327 827 aaKnown RBP17.77■□□□□ 0.44
TOP3B-215ENST00000470338 TRIM27P14373 513 aa17.77■□□□□ 0.44
TOP3B-215ENST00000470338 ATF7IPQ6VMQ6 1270 aa17.77■□□□□ 0.44
TOP3B-215ENST00000470338 TXNRD3Q86VQ6 643 aa17.77■□□□□ 0.44
TOP3B-215ENST00000470338 DPF2Q92785 391 aa17.77■□□□□ 0.44
TOP3B-215ENST00000470338 ADARB2Q9NS39 739 aaKnown RBP17.77■□□□□ 0.44
TOP3B-215ENST00000470338 ZNF646O15015 1829 aaPredicted RBP17.77■□□□□ 0.43
TOP3B-215ENST00000470338 TAF5LO75529 589 aa17.76■□□□□ 0.43
TOP3B-215ENST00000470338 RPS12P25398 132 aaKnown RBP17.76■□□□□ 0.43
TOP3B-215ENST00000470338 C15orf52Q6ZUT6 534 aaKnown RBP17.76■□□□□ 0.43
TOP3B-215ENST00000470338 HELBQ8NG08 1087 aaPredicted RBP17.76■□□□□ 0.43
TOP3B-215ENST00000470338 FRAT1Q92837 279 aaPredicted RBP17.76■□□□□ 0.43
TOP3B-215ENST00000470338 CNNM1Q9NRU3 951 aa17.76■□□□□ 0.43
TOP3B-215ENST00000470338 CNOT7Q9UIV1 285 aaKnown RBP17.76■□□□□ 0.43
TOP3B-215ENST00000470338 ZBTB12Q9Y330 459 aaPredicted RBP17.76■□□□□ 0.43
TOP3B-215ENST00000470338 IRS2Q9Y4H2 1338 aa17.75■□□□□ 0.43
TOP3B-215ENST00000470338 ITGBL1O95965 494 aaPredicted RBP17.75■□□□□ 0.43
TOP3B-215ENST00000470338 UBTFL1P0CB47 393 aaPredicted RBP17.75■□□□□ 0.43
TOP3B-215ENST00000470338 PUS3Q9BZE2 481 aaKnown RBP17.75■□□□□ 0.43
TOP3B-215ENST00000470338 COA1Q9GZY4 146 aa17.75■□□□□ 0.43
TOP3B-215ENST00000470338 CLEC11AQ9Y240 323 aa17.75■□□□□ 0.43
TOP3B-215ENST00000470338 RIPOR2Q9Y4F9 1068 aa17.75■□□□□ 0.43
TOP3B-215ENST00000470338 ZNF609O15014 1411 aa17.74■□□□□ 0.43
TOP3B-215ENST00000470338 SNAP23O00161 211 aa17.74■□□□□ 0.43
TOP3B-215ENST00000470338 KLRK1P26718 216 aa17.74■□□□□ 0.43
TOP3B-215ENST00000470338 KCNJ4P48050 445 aa17.74■□□□□ 0.43
TOP3B-215ENST00000470338 ZKSCAN2Q63HK3 967 aa17.74■□□□□ 0.43
TOP3B-215ENST00000470338 HDAC5Q9UQL6 1122 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms