RNA–Protein interactions for RNA: ENST00000470259.1

ITGA6-209, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 365 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-209ENST00000470259 SSFA2P28290 1259 aa7.86□□□□□ -1.15
ITGA6-209ENST00000470259 NRG1Q02297 640 aaPredicted RBP7.86□□□□□ -1.15
ITGA6-209ENST00000470259 DNM1Q05193 864 aaKnown RBP7.86□□□□□ -1.15
ITGA6-209ENST00000470259 HYAL2Q12891 473 aa7.86□□□□□ -1.15
ITGA6-209ENST00000470259 NOM1Q5C9Z4 860 aaKnown RBP7.86□□□□□ -1.15
ITGA6-209ENST00000470259 DTWD1Q8N5C7 304 aa7.86□□□□□ -1.15
ITGA6-209ENST00000470259 OR13H1Q8NG92 308 aa7.86□□□□□ -1.15
ITGA6-209ENST00000470259 NUDT16Q96DE0 195 aaKnown RBP7.86□□□□□ -1.15
ITGA6-209ENST00000470259 SEMA6BQ9H3T3 888 aa7.86□□□□□ -1.15
ITGA6-209ENST00000470259 CARNS1A5YM72 827 aa7.85□□□□□ -1.15
ITGA6-209ENST00000470259 ZNF438Q7Z4V0 828 aa7.85□□□□□ -1.15
ITGA6-209ENST00000470259 IL22RA1Q8N6P7 574 aa7.85□□□□□ -1.15
ITGA6-209ENST00000470259 EDEM1Q92611 657 aa7.85□□□□□ -1.15
ITGA6-209ENST00000470259 LENG1Q96BZ8 264 aaPredicted RBP7.85□□□□□ -1.15
ITGA6-209ENST00000470259 ARID3AQ99856 593 aa7.85□□□□□ -1.15
ITGA6-209ENST00000470259 ABI2Q9NYB9 513 aaPredicted RBP7.85□□□□□ -1.15
ITGA6-209ENST00000470259 MTMR7Q9Y216 660 aa7.85□□□□□ -1.15
ITGA6-209ENST00000470259 MBTPS1Q14703 1052 aa7.84□□□□□ -1.15
ITGA6-209ENST00000470259 C8orf34Q49A92 452 aa7.84□□□□□ -1.15
ITGA6-209ENST00000470259 FBXO11Q86XK2 927 aa7.84□□□□□ -1.15
ITGA6-209ENST00000470259 ELP3Q9H9T3 547 aa7.84□□□□□ -1.15
ITGA6-209ENST00000470259 TPSG1Q9NRR2 321 aa7.84□□□□□ -1.15
ITGA6-209ENST00000470259 RPLP1P05386 114 aaKnown RBP7.83□□□□□ -1.16
ITGA6-209ENST00000470259 HOXD8P13378 290 aaPredicted RBP7.83□□□□□ -1.16
ITGA6-209ENST00000470259 MPSTP25325 297 aa7.83□□□□□ -1.16
ITGA6-209ENST00000470259 MTMR3Q13615 1198 aa7.83□□□□□ -1.16
ITGA6-209ENST00000470259 ADGRE1Q14246 886 aa7.83□□□□□ -1.16
ITGA6-209ENST00000470259 ERICH6Q7L0X2 663 aa7.83□□□□□ -1.16
ITGA6-209ENST00000470259 TRIM33Q9UPN9 1127 aa7.83□□□□□ -1.16
ITGA6-209ENST00000470259 SMNDC1O75940 238 aaKnown RBP eCLIP7.82□□□□□ -1.16
ITGA6-209ENST00000470259 ABL1P00519 1130 aa7.82□□□□□ -1.16
ITGA6-209ENST00000470259 EIF1AXP47813 144 aaKnown RBP7.82□□□□□ -1.16
ITGA6-209ENST00000470259 COL13A1Q5TAT6 717 aaPredicted RBP7.82□□□□□ -1.16
ITGA6-209ENST00000470259 CEP135Q66GS9 1140 aa7.82□□□□□ -1.16
ITGA6-209ENST00000470259 PDE12Q6L8Q7 609 aaKnown RBP7.82□□□□□ -1.16
ITGA6-209ENST00000470259 ALKBH2Q6NS38 261 aa7.82□□□□□ -1.16
ITGA6-209ENST00000470259 TXNRD3Q86VQ6 643 aa7.82□□□□□ -1.16
ITGA6-209ENST00000470259 NCAPG2Q86XI2 1143 aa7.82□□□□□ -1.16
ITGA6-209ENST00000470259 SUPT5HO00267 1087 aaKnown RBP7.81□□□□□ -1.16
ITGA6-209ENST00000470259 CYP2E1P05181 493 aaPredicted RBP7.81□□□□□ -1.16
ITGA6-209ENST00000470259 ILDR2Q71H61 639 aa7.81□□□□□ -1.16
ITGA6-209ENST00000470259 LACRTQ9GZZ8 138 aa7.81□□□□□ -1.16
ITGA6-209ENST00000470259 TMEM63CQ9P1W3 806 aa7.81□□□□□ -1.16
ITGA6-209ENST00000470259 PDGFAP04085 211 aa7.8□□□□□ -1.16
ITGA6-209ENST00000470259 MZF1P28698 734 aaPredicted RBP7.8□□□□□ -1.16
ITGA6-209ENST00000470259 ATP11AP98196 1134 aa7.8□□□□□ -1.16
ITGA6-209ENST00000470259 RSPO4Q2I0M5 234 aaPredicted RBP7.8□□□□□ -1.16
ITGA6-209ENST00000470259 IGF2-ASQ6U949 168 aa7.8□□□□□ -1.16
ITGA6-209ENST00000470259 KANSL3Q9P2N6 904 aa7.8□□□□□ -1.16
ITGA6-209ENST00000470259 LOC100996750A0A140TA64 210 aa7.79□□□□□ -1.16
ITGA6-209ENST00000470259 A6NHS1 94 aa7.79□□□□□ -1.16
ITGA6-209ENST00000470259 FAM177BA6PVY3 158 aa7.79□□□□□ -1.16
ITGA6-209ENST00000470259 DEAF1O75398 565 aaPredicted RBP7.79□□□□□ -1.16
ITGA6-209ENST00000470259 FAM13AO94988 1023 aa7.79□□□□□ -1.16
ITGA6-209ENST00000470259 CDC25BP30305 580 aa7.79□□□□□ -1.16
ITGA6-209ENST00000470259 CACTIN-AS1Q8N1I8 211 aa7.79□□□□□ -1.16
ITGA6-209ENST00000470259 TP53INP1Q96A56 240 aa7.79□□□□□ -1.16
ITGA6-209ENST00000470259 KRTAP4-6Q9BYQ5 205 aa7.79□□□□□ -1.16
ITGA6-209ENST00000470259 MUC3BQ9H195 1237 aa7.79□□□□□ -1.16
ITGA6-209ENST00000470259 RASSF4Q9H2L5 321 aa7.79□□□□□ -1.16
ITGA6-209ENST00000470259 GGNBP2Q9H3C7 697 aa7.79□□□□□ -1.16
ITGA6-209ENST00000470259 ANO2Q9NQ90 1003 aa7.79□□□□□ -1.16
ITGA6-209ENST00000470259 CNTN3Q9P232 1028 aa7.79□□□□□ -1.16
ITGA6-209ENST00000470259 PPME1Q9Y570 386 aa7.79□□□□□ -1.16
ITGA6-209ENST00000470259 CES1P23141 567 aa7.78□□□□□ -1.16
ITGA6-209ENST00000470259 IREB2P48200 963 aaKnown RBP7.78□□□□□ -1.16
ITGA6-209ENST00000470259 WFDC12Q8WWY7 111 aa7.78□□□□□ -1.16
ITGA6-209ENST00000470259 POLIQ9UNA4 740 aa7.78□□□□□ -1.16
ITGA6-209ENST00000470259 LINC01387J3KSC0 135 aa7.77□□□□□ -1.17
ITGA6-209ENST00000470259 DLL1O00548 723 aa7.77□□□□□ -1.17
ITGA6-209ENST00000470259 CDC27P30260 824 aa7.77□□□□□ -1.17
ITGA6-209ENST00000470259 FKBP4Q02790 459 aaKnown RBP eCLIP7.77□□□□□ -1.17
ITGA6-209ENST00000470259 ZNF211Q13398 564 aaPredicted RBP7.77□□□□□ -1.17
ITGA6-209ENST00000470259 SF3B2Q13435 895 aaKnown RBP7.77□□□□□ -1.17
ITGA6-209ENST00000470259 NKAPLQ5M9Q1 402 aa7.77□□□□□ -1.17
ITGA6-209ENST00000470259 B4GALNT3Q6L9W6 998 aa7.77□□□□□ -1.17
ITGA6-209ENST00000470259 PHLDB3Q6NSJ2 640 aa7.77□□□□□ -1.17
ITGA6-209ENST00000470259 DCAF11Q8TEB1 546 aa7.77□□□□□ -1.17
ITGA6-209ENST00000470259 PBX4Q9BYU1 374 aa7.77□□□□□ -1.17
ITGA6-209ENST00000470259 DYRK3O43781 588 aa7.76□□□□□ -1.17
ITGA6-209ENST00000470259 KIF4AO95239 1232 aa7.76□□□□□ -1.17
ITGA6-209ENST00000470259 SETDB1Q15047 1291 aa7.76□□□□□ -1.17
ITGA6-209ENST00000470259 FAM117BQ6P1L5 589 aa7.76□□□□□ -1.17
ITGA6-209ENST00000470259 TXNDC11Q6PKC3 985 aa7.76□□□□□ -1.17
ITGA6-209ENST00000470259 XKR5Q6UX68 686 aa7.76□□□□□ -1.17
ITGA6-209ENST00000470259 MAP4K3Q8IVH8 894 aa7.76□□□□□ -1.17
ITGA6-209ENST00000470259 C1orf127Q8N9H9 656 aa7.76□□□□□ -1.17
ITGA6-209ENST00000470259 PMEPA1Q969W9 287 aa7.76□□□□□ -1.17
ITGA6-209ENST00000470259 SRA1Q9HD15 236 aaKnown RBP7.76□□□□□ -1.17
ITGA6-209ENST00000470259 USTQ9Y2C2 406 aa7.76□□□□□ -1.17
ITGA6-209ENST00000470259 PTPRAP18433 802 aa7.75□□□□□ -1.17
ITGA6-209ENST00000470259 NOS3P29474 1203 aa7.75□□□□□ -1.17
ITGA6-209ENST00000470259 CEP120Q8N960 986 aa7.75□□□□□ -1.17
ITGA6-209ENST00000470259 MRPL18Q9H0U6 180 aaKnown RBP7.75□□□□□ -1.17
ITGA6-209ENST00000470259 USP5P45974 858 aa7.74□□□□□ -1.17
ITGA6-209ENST00000470259 AKTIPQ9H8T0 292 aa7.74□□□□□ -1.17
ITGA6-209ENST00000470259 SH2B1Q9NRF2 756 aaPredicted RBP7.74□□□□□ -1.17
ITGA6-209ENST00000470259 PHACTR2O75167 634 aa7.73□□□□□ -1.17
ITGA6-209ENST00000470259 ALX3O95076 343 aa7.73□□□□□ -1.17
ITGA6-209ENST00000470259 H2AFB1P0C5Y9 115 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms