RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 CTSWP56202 376 aa11.82□□□□□ -0.52
SHROOM3-203ENST00000469923 COL13A1Q5TAT6 717 aaPredicted RBP11.82□□□□□ -0.52
SHROOM3-203ENST00000469923 CIAPIN1Q6FI81 312 aa11.82□□□□□ -0.52
SHROOM3-203ENST00000469923 MIER1Q8N108 512 aa11.82□□□□□ -0.52
SHROOM3-203ENST00000469923 MRPL50Q8N5N7 158 aaKnown RBP11.82□□□□□ -0.52
SHROOM3-203ENST00000469923 KAZALD1Q96I82 304 aa11.82□□□□□ -0.52
SHROOM3-203ENST00000469923 GLIS2Q9BZE0 524 aaPredicted RBP11.82□□□□□ -0.52
SHROOM3-203ENST00000469923 GPRC5DQ9NZD1 345 aa11.82□□□□□ -0.52
SHROOM3-203ENST00000469923 CNOT7Q9UIV1 285 aaKnown RBP11.82□□□□□ -0.52
SHROOM3-203ENST00000469923 ECE2O60344 883 aa11.81□□□□□ -0.52
SHROOM3-203ENST00000469923 UFL1O94874 794 aa11.81□□□□□ -0.52
SHROOM3-203ENST00000469923 DDX58O95786 925 aaKnown RBP11.81□□□□□ -0.52
SHROOM3-203ENST00000469923 VEGFBP49765 207 aa11.81□□□□□ -0.52
SHROOM3-203ENST00000469923 SLFN5Q08AF3 891 aa11.81□□□□□ -0.52
SHROOM3-203ENST00000469923 FAM161AQ3B820 660 aa11.81□□□□□ -0.52
SHROOM3-203ENST00000469923 TBC1D10BQ4KMP7 808 aaPredicted RBP11.81□□□□□ -0.52
SHROOM3-203ENST00000469923 NCBP3Q53F19 620 aaKnown RBP11.81□□□□□ -0.52
SHROOM3-203ENST00000469923 JMYQ8N9B5 988 aa11.81□□□□□ -0.52
SHROOM3-203ENST00000469923 SSH1Q8WYL5 1049 aa11.81□□□□□ -0.52
SHROOM3-203ENST00000469923 IQCA1LA6NCM1 817 aa11.8□□□□□ -0.52
SHROOM3-203ENST00000469923 TAF5LO75529 589 aa11.8□□□□□ -0.52
SHROOM3-203ENST00000469923 CSF1RP07333 972 aa11.8□□□□□ -0.52
SHROOM3-203ENST00000469923 CCDC152Q4G0S7 254 aa11.8□□□□□ -0.52
SHROOM3-203ENST00000469923 SLC4A10Q6U841 1118 aa11.8□□□□□ -0.52
SHROOM3-203ENST00000469923 USP48Q86UV5 1035 aa11.8□□□□□ -0.52
SHROOM3-203ENST00000469923 ANKIB1Q9P2G1 1089 aa11.8□□□□□ -0.52
SHROOM3-203ENST00000469923 ITGA6P23229 1130 aa11.79□□□□□ -0.52
SHROOM3-203ENST00000469923 MICALL2Q8IY33 904 aa11.79□□□□□ -0.52
SHROOM3-203ENST00000469923 ZIC5Q96T25 663 aa11.79□□□□□ -0.52
SHROOM3-203ENST00000469923 PUS3Q9BZE2 481 aaKnown RBP11.79□□□□□ -0.52
SHROOM3-203ENST00000469923 TNNQ9UQP3 1299 aa11.79□□□□□ -0.52
SHROOM3-203ENST00000469923 CDHR2Q9BYE9 1310 aa11.79□□□□□ -0.52
SHROOM3-203ENST00000469923 SCN9AQ15858 1988 aa11.78□□□□□ -0.52
SHROOM3-203ENST00000469923 NBPF7P0C2Y1 421 aaPredicted RBP11.78□□□□□ -0.52
SHROOM3-203ENST00000469923 LMBR1LQ6UX01 489 aa11.78□□□□□ -0.52
SHROOM3-203ENST00000469923 ANKRD18AQ8IVF6 992 aa11.78□□□□□ -0.52
SHROOM3-203ENST00000469923 TRMT2AQ8IZ69 625 aaKnown RBP11.78□□□□□ -0.52
SHROOM3-203ENST00000469923 SUPT20HQ8NEM7 779 aa11.78□□□□□ -0.52
SHROOM3-203ENST00000469923 LINS1Q8NG48 757 aa11.78□□□□□ -0.52
SHROOM3-203ENST00000469923 SUCLG2Q96I99 432 aa11.78□□□□□ -0.52
SHROOM3-203ENST00000469923 TMX4Q9H1E5 349 aaPredicted RBP11.78□□□□□ -0.52
SHROOM3-203ENST00000469923 PODXL2Q9NZ53 605 aa11.78□□□□□ -0.52
SHROOM3-203ENST00000469923 GGA1Q9UJY5 639 aa11.78□□□□□ -0.52
SHROOM3-203ENST00000469923 PCDHAC2Q9Y5I4 1007 aa11.78□□□□□ -0.52
SHROOM3-203ENST00000469923 VIL1P09327 827 aaKnown RBP11.77□□□□□ -0.53
SHROOM3-203ENST00000469923 NEXNQ0ZGT2 675 aa11.77□□□□□ -0.53
SHROOM3-203ENST00000469923 GRIPAP1Q4V328 841 aa11.77□□□□□ -0.53
SHROOM3-203ENST00000469923 PRAMEF18Q5VWM3 479 aa11.77□□□□□ -0.53
SHROOM3-203ENST00000469923 ZC3H12CQ9C0D7 883 aaKnown RBP11.77□□□□□ -0.53
SHROOM3-203ENST00000469923 CREBZFQ9NS37 354 aa11.77□□□□□ -0.53
SHROOM3-203ENST00000469923 ADARB2Q9NS39 739 aaKnown RBP11.77□□□□□ -0.53
SHROOM3-203ENST00000469923 JAG2Q9Y219 1238 aa11.77□□□□□ -0.53
SHROOM3-203ENST00000469923 ADAMTSL1Q8N6G6 1762 aa11.77□□□□□ -0.53
SHROOM3-203ENST00000469923 TMEM88BA6NKF7 163 aa11.76□□□□□ -0.53
SHROOM3-203ENST00000469923 ADM5C9JUS6 153 aa11.76□□□□□ -0.53
SHROOM3-203ENST00000469923 PLIN1O60240 522 aa11.76□□□□□ -0.53
SHROOM3-203ENST00000469923 AOC2O75106 756 aa11.76□□□□□ -0.53
SHROOM3-203ENST00000469923 HSPA1AP0DMV8 641 aaKnown RBP11.76□□□□□ -0.53
SHROOM3-203ENST00000469923 HSPA1BP0DMV9 641 aaKnown RBP11.76□□□□□ -0.53
SHROOM3-203ENST00000469923 LMOD1P29536 600 aaPredicted RBP11.76□□□□□ -0.53
SHROOM3-203ENST00000469923 GRM1Q13255 1194 aa11.76□□□□□ -0.53
SHROOM3-203ENST00000469923 USP50Q70EL3 339 aaPredicted RBP11.76□□□□□ -0.53
SHROOM3-203ENST00000469923 PNMA8AQ86V59 439 aaPredicted RBP11.76□□□□□ -0.53
SHROOM3-203ENST00000469923 KLHDC4Q8TBB5 520 aa11.76□□□□□ -0.53
SHROOM3-203ENST00000469923 GMLQ99445 158 aa11.76□□□□□ -0.53
SHROOM3-203ENST00000469923 PLA2G12BQ9BX93 195 aa11.76□□□□□ -0.53
SHROOM3-203ENST00000469923 VPS33BQ9H267 617 aa11.76□□□□□ -0.53
SHROOM3-203ENST00000469923 MYH16Q9H6N6 1097 aa11.76□□□□□ -0.53
SHROOM3-203ENST00000469923 BSDC1Q9NW68 430 aaPredicted RBP11.76□□□□□ -0.53
SHROOM3-203ENST00000469923 PGAP2Q9UHJ9 254 aa11.76□□□□□ -0.53
SHROOM3-203ENST00000469923 AOX1Q06278 1338 aa11.76□□□□□ -0.53
SHROOM3-203ENST00000469923 SCN4AP35499 1836 aa11.75□□□□□ -0.53
SHROOM3-203ENST00000469923 CCT4P50991 539 aaKnown RBP11.75□□□□□ -0.53
SHROOM3-203ENST00000469923 TNIP1Q15025 636 aa11.75□□□□□ -0.53
SHROOM3-203ENST00000469923 CYP4F22Q6NT55 531 aa11.75□□□□□ -0.53
SHROOM3-203ENST00000469923 TMC4Q7Z404 712 aa11.75□□□□□ -0.53
SHROOM3-203ENST00000469923 ZNF408Q9H9D4 720 aa11.75□□□□□ -0.53
SHROOM3-203ENST00000469923 CHMP3Q9Y3E7 222 aa11.75□□□□□ -0.53
SHROOM3-203ENST00000469923 IRS2Q9Y4H2 1338 aa11.75□□□□□ -0.53
SHROOM3-203ENST00000469923 POLR2AP24928 1970 aaKnown RBP11.74□□□□□ -0.53
SHROOM3-203ENST00000469923 FOXN1O15353 648 aa11.74□□□□□ -0.53
SHROOM3-203ENST00000469923 CHRNDQ07001 517 aa11.74□□□□□ -0.53
SHROOM3-203ENST00000469923 MOB2Q70IA6 237 aa11.74□□□□□ -0.53
SHROOM3-203ENST00000469923 ANKRD44Q8N8A2 993 aa11.74□□□□□ -0.53
SHROOM3-203ENST00000469923 LRRC37AA6NMS7 1700 aa11.73□□□□□ -0.53
SHROOM3-203ENST00000469923 GRM8O00222 908 aa11.73□□□□□ -0.53
SHROOM3-203ENST00000469923 CELF2O95319 508 aaKnown RBP11.73□□□□□ -0.53
SHROOM3-203ENST00000469923 ATP2B4P23634 1241 aa11.73□□□□□ -0.53
SHROOM3-203ENST00000469923 XDHP47989 1333 aa11.73□□□□□ -0.53
SHROOM3-203ENST00000469923 CNTNAP1P78357 1384 aa11.73□□□□□ -0.53
SHROOM3-203ENST00000469923 SCARF1Q14162 830 aa11.73□□□□□ -0.53
SHROOM3-203ENST00000469923 GRIK5Q16478 980 aa11.73□□□□□ -0.53
SHROOM3-203ENST00000469923 DEFB115Q30KQ5 88 aa11.73□□□□□ -0.53
SHROOM3-203ENST00000469923 NBPF9Q3BBW0 867 aa11.73□□□□□ -0.53
SHROOM3-203ENST00000469923 DACT2Q5SW24 774 aa11.73□□□□□ -0.53
SHROOM3-203ENST00000469923 CERS5Q8N5B7 392 aa11.73□□□□□ -0.53
SHROOM3-203ENST00000469923 FBXW7Q969H0 707 aa11.73□□□□□ -0.53
SHROOM3-203ENST00000469923 USP44Q9H0E7 712 aa11.73□□□□□ -0.53
SHROOM3-203ENST00000469923 TSKSQ9UJT2 592 aa11.73□□□□□ -0.53
SHROOM3-203ENST00000469923 ABT1Q9ULW3 272 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms