RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 SOX18P35713 384 aa6.91□□□□□ -1.3
VPS8-220ENST00000469713 RANGAP1P46060 587 aaPredicted RBP6.91□□□□□ -1.3
VPS8-220ENST00000469713 PCBP4P57723 403 aaKnown RBP6.91□□□□□ -1.3
VPS8-220ENST00000469713 MLLT1Q03111 559 aaPredicted RBP6.91□□□□□ -1.3
VPS8-220ENST00000469713 PLAURQ03405 335 aa6.91□□□□□ -1.3
VPS8-220ENST00000469713 TBC1D8BQ0IIM8 1120 aa6.91□□□□□ -1.3
VPS8-220ENST00000469713 MRPL58Q14197 206 aaKnown RBP6.91□□□□□ -1.3
VPS8-220ENST00000469713 RNFT1Q5M7Z0 435 aa6.91□□□□□ -1.3
VPS8-220ENST00000469713 TMC4Q7Z404 712 aa6.91□□□□□ -1.3
VPS8-220ENST00000469713 ZSCAN1Q8NBB4 408 aa6.91□□□□□ -1.3
VPS8-220ENST00000469713 KRTAP4-6Q9BYQ5 205 aa6.91□□□□□ -1.3
VPS8-220ENST00000469713 IGFLR1Q9H665 355 aa6.91□□□□□ -1.3
VPS8-220ENST00000469713 MBIPQ9NS73 344 aa6.91□□□□□ -1.3
VPS8-220ENST00000469713 SALL4Q9UJQ4 1053 aa6.91□□□□□ -1.3
VPS8-220ENST00000469713 ZBTB42B2RXF5 422 aa6.9□□□□□ -1.3
VPS8-220ENST00000469713 HOXD8P13378 290 aaPredicted RBP6.9□□□□□ -1.3
VPS8-220ENST00000469713 ACPPP15309 386 aa6.9□□□□□ -1.3
VPS8-220ENST00000469713 NRLP54845 237 aa6.9□□□□□ -1.3
VPS8-220ENST00000469713 HYAL2Q12891 473 aa6.9□□□□□ -1.3
VPS8-220ENST00000469713 COL25A1Q9BXS0 654 aaPredicted RBP6.9□□□□□ -1.3
VPS8-220ENST00000469713 UBE2OQ9C0C9 1292 aaKnown RBP6.9□□□□□ -1.3
VPS8-220ENST00000469713 NLRP2Q9NX02 1062 aa6.9□□□□□ -1.3
VPS8-220ENST00000469713 DNAJB12Q9NXW2 375 aaKnown RBP6.9□□□□□ -1.3
VPS8-220ENST00000469713 KLF15Q9UIH9 416 aa6.9□□□□□ -1.3
VPS8-220ENST00000469713 SORBS3O60504 671 aa6.89□□□□□ -1.31
VPS8-220ENST00000469713 SIN3BO75182 1162 aa6.89□□□□□ -1.31
VPS8-220ENST00000469713 GADD45BO75293 160 aaPredicted RBP6.89□□□□□ -1.31
VPS8-220ENST00000469713 KIF4AO95239 1232 aa6.89□□□□□ -1.31
VPS8-220ENST00000469713 RECKO95980 971 aa6.89□□□□□ -1.31
VPS8-220ENST00000469713 EDN3P14138 238 aa6.89□□□□□ -1.31
VPS8-220ENST00000469713 VAMP1P23763 118 aa6.89□□□□□ -1.31
VPS8-220ENST00000469713 GPLD1P80108 840 aa6.89□□□□□ -1.31
VPS8-220ENST00000469713 PEAR1Q5VY43 1037 aaPredicted RBP6.89□□□□□ -1.31
VPS8-220ENST00000469713 HFE2Q6ZVN8 426 aa6.89□□□□□ -1.31
VPS8-220ENST00000469713 NCAPG2Q86XI2 1143 aa6.89□□□□□ -1.31
VPS8-220ENST00000469713 TRPM4Q8TD43 1214 aa6.89□□□□□ -1.31
VPS8-220ENST00000469713 OSBPL7Q9BZF2 842 aa6.89□□□□□ -1.31
VPS8-220ENST00000469713 BCL11AQ9H165 835 aa6.89□□□□□ -1.31
VPS8-220ENST00000469713 MRS2Q9HD23 443 aa6.89□□□□□ -1.31
VPS8-220ENST00000469713 VTI1BQ9UEU0 232 aa6.89□□□□□ -1.31
VPS8-220ENST00000469713 SPG7Q9UQ90 795 aa6.89□□□□□ -1.31
VPS8-220ENST00000469713 IGF1RP08069 1367 aa6.88□□□□□ -1.31
VPS8-220ENST00000469713 A0A1W2PP55 124 aa6.88□□□□□ -1.31
VPS8-220ENST00000469713 J3QW42 95 aa6.88□□□□□ -1.31
VPS8-220ENST00000469713 ARAFP10398 606 aa6.88□□□□□ -1.31
VPS8-220ENST00000469713 TSNAXIP1Q2TAA8 658 aa6.88□□□□□ -1.31
VPS8-220ENST00000469713 FRMD6Q96NE9 622 aa6.88□□□□□ -1.31
VPS8-220ENST00000469713 SUV39H2Q9H5I1 410 aa6.88□□□□□ -1.31
VPS8-220ENST00000469713 AVENQ9NQS1 362 aaPredicted RBP6.88□□□□□ -1.31
VPS8-220ENST00000469713 NSFL1CQ9UNZ2 370 aaKnown RBP6.88□□□□□ -1.31
VPS8-220ENST00000469713 AK5Q9Y6K8 562 aa6.88□□□□□ -1.31
VPS8-220ENST00000469713 LOC102724428A0A0B4J2F2 783 aa6.87□□□□□ -1.31
VPS8-220ENST00000469713 NEURL1BA8MQ27 555 aa6.87□□□□□ -1.31
VPS8-220ENST00000469713 TRPA1O75762 1119 aa6.87□□□□□ -1.31
VPS8-220ENST00000469713 ADH6P28332 368 aa6.87□□□□□ -1.31
VPS8-220ENST00000469713 MAP2K3P46734 347 aa6.87□□□□□ -1.31
VPS8-220ENST00000469713 SIK1P57059 783 aa6.87□□□□□ -1.31
VPS8-220ENST00000469713 KRT76Q01546 638 aa6.87□□□□□ -1.31
VPS8-220ENST00000469713 GRM2Q14416 872 aa6.87□□□□□ -1.31
VPS8-220ENST00000469713 KIAA0319Q5VV43 1072 aa6.87□□□□□ -1.31
VPS8-220ENST00000469713 NXPE4Q6UWF7 544 aa6.87□□□□□ -1.31
VPS8-220ENST00000469713 FCHSD1Q86WN1 690 aa6.87□□□□□ -1.31
VPS8-220ENST00000469713 CEP120Q8N960 986 aa6.87□□□□□ -1.31
VPS8-220ENST00000469713 CNTNAP3BQ96NU0 1288 aa6.87□□□□□ -1.31
VPS8-220ENST00000469713 ZKSCAN3Q9BRR0 538 aa6.87□□□□□ -1.31
VPS8-220ENST00000469713 BCO2Q9BYV7 579 aa6.87□□□□□ -1.31
VPS8-220ENST00000469713 CNTNAP3Q9BZ76 1288 aa6.87□□□□□ -1.31
VPS8-220ENST00000469713 C12orf49Q9H741 205 aa6.87□□□□□ -1.31
VPS8-220ENST00000469713 EIF4BP23588 611 aaKnown RBP6.86□□□□□ -1.31
VPS8-220ENST00000469713 ADH7P40394 386 aa6.86□□□□□ -1.31
VPS8-220ENST00000469713 TNFRSF25Q93038 417 aa6.86□□□□□ -1.31
VPS8-220ENST00000469713 HHIPQ96QV1 700 aa6.86□□□□□ -1.31
VPS8-220ENST00000469713 OSMRQ99650 979 aa6.86□□□□□ -1.31
VPS8-220ENST00000469713 BACH2Q9BYV9 841 aa6.86□□□□□ -1.31
VPS8-220ENST00000469713 EHD4Q9H223 541 aa6.86□□□□□ -1.31
VPS8-220ENST00000469713 GGA1Q9UJY5 639 aa6.86□□□□□ -1.31
VPS8-220ENST00000469713 SLC6A14Q9UN76 642 aa6.86□□□□□ -1.31
VPS8-220ENST00000469713 GIPC1O14908 333 aa6.85□□□□□ -1.31
VPS8-220ENST00000469713 CTSHP09668 335 aa6.85□□□□□ -1.31
VPS8-220ENST00000469713 CPB1P15086 417 aa6.85□□□□□ -1.31
VPS8-220ENST00000469713 EIF2AK2P19525 551 aaKnown RBP6.85□□□□□ -1.31
VPS8-220ENST00000469713 ATP11AP98196 1134 aa6.85□□□□□ -1.31
VPS8-220ENST00000469713 LDLRAD1Q5T700 205 aa6.85□□□□□ -1.31
VPS8-220ENST00000469713 GLIS3Q8NEA6 775 aa6.85□□□□□ -1.31
VPS8-220ENST00000469713 SPACA7Q96KW9 195 aa6.85□□□□□ -1.31
VPS8-220ENST00000469713 MDFIQ99750 246 aa6.85□□□□□ -1.31
VPS8-220ENST00000469713 RASSF4Q9H2L5 321 aa6.85□□□□□ -1.31
VPS8-220ENST00000469713 DZANK1Q9NVP4 752 aa6.85□□□□□ -1.31
VPS8-220ENST00000469713 NAGPAQ9UK23 515 aa6.85□□□□□ -1.31
VPS8-220ENST00000469713 ADARB2-AS1A8MUL3 147 aa6.84□□□□□ -1.31
VPS8-220ENST00000469713 GHRHP01286 108 aa6.84□□□□□ -1.31
VPS8-220ENST00000469713 ITGAEP38570 1179 aa6.84□□□□□ -1.31
VPS8-220ENST00000469713 SRSF11Q05519 484 aaKnown RBP6.84□□□□□ -1.31
VPS8-220ENST00000469713 PCSK7Q16549 785 aa6.84□□□□□ -1.31
VPS8-220ENST00000469713 FAM35AQ86V20 835 aa6.84□□□□□ -1.31
VPS8-220ENST00000469713 TCF12Q99081 682 aa6.84□□□□□ -1.31
VPS8-220ENST00000469713 OXCT2Q9BYC2 517 aaPredicted RBP6.84□□□□□ -1.31
VPS8-220ENST00000469713 LIN7BQ9HAP6 207 aa6.84□□□□□ -1.31
VPS8-220ENST00000469713 IGSF5Q9NSI5 407 aa6.84□□□□□ -1.31
VPS8-220ENST00000469713 NFKBIEO00221 500 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms