RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 ZBTB7BO15156 539 aaPredicted RBP10.53□□□□□ -0.72
GAPVD1-213ENST00000469498 NPHP1O15259 732 aa10.53□□□□□ -0.72
GAPVD1-213ENST00000469498 PCCAP05165 728 aaPredicted RBP10.53□□□□□ -0.72
GAPVD1-213ENST00000469498 GNAI3P08754 354 aa10.53□□□□□ -0.72
GAPVD1-213ENST00000469498 MMP10P09238 476 aa10.53□□□□□ -0.72
GAPVD1-213ENST00000469498 TRIM28Q13263 835 aaKnown RBP10.53□□□□□ -0.72
GAPVD1-213ENST00000469498 DOK7Q18PE1 504 aa10.53□□□□□ -0.72
GAPVD1-213ENST00000469498 PPP1R42Q7Z4L9 355 aa10.53□□□□□ -0.72
GAPVD1-213ENST00000469498 NBPF5PQ86XG9 351 aaPredicted RBP10.53□□□□□ -0.72
GAPVD1-213ENST00000469498 SYNE4Q8N205 404 aa10.53□□□□□ -0.72
GAPVD1-213ENST00000469498 NLGN1Q8N2Q7 840 aa10.53□□□□□ -0.72
GAPVD1-213ENST00000469498 FAM89AQ96GI7 184 aa10.53□□□□□ -0.72
GAPVD1-213ENST00000469498 UTP14AQ9BVJ6 771 aaKnown RBP10.53□□□□□ -0.72
GAPVD1-213ENST00000469498 LRRFIP2Q9Y608 721 aaKnown RBP10.53□□□□□ -0.72
GAPVD1-213ENST00000469498 UTYO14607 1347 aa10.53□□□□□ -0.72
GAPVD1-213ENST00000469498 SH3TC1Q8TE82 1336 aa10.53□□□□□ -0.72
GAPVD1-213ENST00000469498 LRP5O75197 1615 aa10.52□□□□□ -0.73
GAPVD1-213ENST00000469498 H7C1W4 665 aa10.52□□□□□ -0.73
GAPVD1-213ENST00000469498 POLRMTO00411 1230 aaKnown RBP10.52□□□□□ -0.73
GAPVD1-213ENST00000469498 ZBTB7AO95365 584 aa10.52□□□□□ -0.73
GAPVD1-213ENST00000469498 CASP7P55210 303 aa10.52□□□□□ -0.73
GAPVD1-213ENST00000469498 ERFEQ4G0M1 354 aa10.52□□□□□ -0.73
GAPVD1-213ENST00000469498 CCDC24Q8N4L8 307 aa10.52□□□□□ -0.73
GAPVD1-213ENST00000469498 CNBD1Q8NA66 436 aa10.52□□□□□ -0.73
GAPVD1-213ENST00000469498 ZBTB38Q8NAP3 1195 aaPredicted RBP10.52□□□□□ -0.73
GAPVD1-213ENST00000469498 SUCLG2Q96I99 432 aa10.52□□□□□ -0.73
GAPVD1-213ENST00000469498 ZBTB40Q9NUA8 1239 aa10.52□□□□□ -0.73
GAPVD1-213ENST00000469498 MYH13Q9UKX3 1938 aa10.52□□□□□ -0.73
GAPVD1-213ENST00000469498 CDHR2Q9BYE9 1310 aa10.52□□□□□ -0.73
GAPVD1-213ENST00000469498 LRRC37AA6NMS7 1700 aa10.51□□□□□ -0.73
GAPVD1-213ENST00000469498 SOCS7O14512 581 aa10.51□□□□□ -0.73
GAPVD1-213ENST00000469498 RIMBP2O15034 1052 aa10.51□□□□□ -0.73
GAPVD1-213ENST00000469498 GNAI2P04899 355 aa10.51□□□□□ -0.73
GAPVD1-213ENST00000469498 SERPINB2P05120 415 aa10.51□□□□□ -0.73
GAPVD1-213ENST00000469498 HOXB3P14651 431 aaPredicted RBP10.51□□□□□ -0.73
GAPVD1-213ENST00000469498 GTF2E1P29083 439 aaPredicted RBP10.51□□□□□ -0.73
GAPVD1-213ENST00000469498 TM4SF1P30408 202 aa10.51□□□□□ -0.73
GAPVD1-213ENST00000469498 SLC16A10Q8TF71 515 aa10.51□□□□□ -0.73
GAPVD1-213ENST00000469498 NYXQ9GZU5 481 aa10.51□□□□□ -0.73
GAPVD1-213ENST00000469498 CHMP4BQ9H444 224 aaKnown RBP10.51□□□□□ -0.73
GAPVD1-213ENST00000469498 PARP3Q9Y6F1 533 aa10.51□□□□□ -0.73
GAPVD1-213ENST00000469498 RIC1Q4ADV7 1423 aa10.5□□□□□ -0.73
GAPVD1-213ENST00000469498 IRS4O14654 1257 aaPredicted RBP10.5□□□□□ -0.73
GAPVD1-213ENST00000469498 HCLS1P14317 486 aaPredicted RBP10.5□□□□□ -0.73
GAPVD1-213ENST00000469498 EPHA10Q5JZY3 1008 aa10.5□□□□□ -0.73
GAPVD1-213ENST00000469498 PRR5LQ6MZQ0 368 aa10.5□□□□□ -0.73
GAPVD1-213ENST00000469498 KAZALD1Q96I82 304 aa10.5□□□□□ -0.73
GAPVD1-213ENST00000469498 BICC1Q9H694 974 aaKnown RBP10.5□□□□□ -0.73
GAPVD1-213ENST00000469498 GTF3C3Q9Y5Q9 886 aa10.5□□□□□ -0.73
GAPVD1-213ENST00000469498 ARAP2Q8WZ64 1704 aa10.5□□□□□ -0.73
GAPVD1-213ENST00000469498 C10orf71Q711Q0 1435 aa10.5□□□□□ -0.73
GAPVD1-213ENST00000469498 SLX4Q8IY92 1834 aa10.49□□□□□ -0.73
GAPVD1-213ENST00000469498 AK9Q5TCS8 1911 aa10.49□□□□□ -0.73
GAPVD1-213ENST00000469498 ST5P78524 1137 aa10.49□□□□□ -0.73
GAPVD1-213ENST00000469498 DPY19L2Q6NUT2 758 aa10.49□□□□□ -0.73
GAPVD1-213ENST00000469498 TPTE2Q6XPS3 522 aa10.49□□□□□ -0.73
GAPVD1-213ENST00000469498 ANKRD44Q8N8A2 993 aa10.49□□□□□ -0.73
GAPVD1-213ENST00000469498 CCDC85AQ96PX6 553 aaPredicted RBP10.49□□□□□ -0.73
GAPVD1-213ENST00000469498 MTFR1LQ9H019 292 aa10.49□□□□□ -0.73
GAPVD1-213ENST00000469498 CHMP3Q9Y3E7 222 aa10.49□□□□□ -0.73
GAPVD1-213ENST00000469498 PCDHB15Q9Y5E8 787 aa10.49□□□□□ -0.73
GAPVD1-213ENST00000469498 PDE8AO60658 829 aa10.48□□□□□ -0.73
GAPVD1-213ENST00000469498 CTSWP56202 376 aa10.48□□□□□ -0.73
GAPVD1-213ENST00000469498 FOXO4P98177 505 aa10.48□□□□□ -0.73
GAPVD1-213ENST00000469498 CEP85Q6P2H3 762 aa10.48□□□□□ -0.73
GAPVD1-213ENST00000469498 HDAC5Q9UQL6 1122 aa10.48□□□□□ -0.73
GAPVD1-213ENST00000469498 ARFGEF1Q9Y6D6 1849 aa10.48□□□□□ -0.73
GAPVD1-213ENST00000469498 CCDC88AQ3V6T2 1871 aa10.48□□□□□ -0.73
GAPVD1-213ENST00000469498 PNMA6EA0A0J9YXQ4 647 aa10.47□□□□□ -0.73
GAPVD1-213ENST00000469498 AAMPQ13685 434 aa10.47□□□□□ -0.73
GAPVD1-213ENST00000469498 FAM161AQ3B820 660 aa10.47□□□□□ -0.73
GAPVD1-213ENST00000469498 VARS2Q5ST30 1063 aaKnown RBP10.47□□□□□ -0.73
GAPVD1-213ENST00000469498 LMBR1LQ6UX01 489 aa10.47□□□□□ -0.73
GAPVD1-213ENST00000469498 PLA2G12BQ9BX93 195 aa10.47□□□□□ -0.73
GAPVD1-213ENST00000469498 SRGAP3O43295 1099 aa10.46□□□□□ -0.73
GAPVD1-213ENST00000469498 POLD1P28340 1107 aa10.46□□□□□ -0.73
GAPVD1-213ENST00000469498 RABL6Q3YEC7 729 aaPredicted RBP10.46□□□□□ -0.73
GAPVD1-213ENST00000469498 LTBP1Q14766 1721 aa10.45□□□□□ -0.74
GAPVD1-213ENST00000469498 HSP90B1P14625 803 aaKnown RBP10.45□□□□□ -0.74
GAPVD1-213ENST00000469498 ATP8B2P98198 1209 aa10.45□□□□□ -0.74
GAPVD1-213ENST00000469498 SLC10A5Q5PT55 438 aa10.45□□□□□ -0.74
GAPVD1-213ENST00000469498 ERICH6BQ5W0A0 696 aa10.45□□□□□ -0.74
GAPVD1-213ENST00000469498 B4GALNT3Q6L9W6 998 aa10.45□□□□□ -0.74
GAPVD1-213ENST00000469498 SIRT2Q8IXJ6 389 aa10.45□□□□□ -0.74
GAPVD1-213ENST00000469498 TTLL11Q8NHH1 800 aa10.45□□□□□ -0.74
GAPVD1-213ENST00000469498 CCDC136Q96JN2 1154 aa10.45□□□□□ -0.74
GAPVD1-213ENST00000469498 GREM2Q9H772 168 aa10.45□□□□□ -0.74
GAPVD1-213ENST00000469498 PPP4R2Q9NY27 417 aa10.45□□□□□ -0.74
GAPVD1-213ENST00000469498 RTL9Q8NET4 1388 aa10.44□□□□□ -0.74
GAPVD1-213ENST00000469498 HMMRO75330 724 aa10.44□□□□□ -0.74
GAPVD1-213ENST00000469498 MTX1Q13505 466 aa10.44□□□□□ -0.74
GAPVD1-213ENST00000469498 CCDC152Q4G0S7 254 aa10.44□□□□□ -0.74
GAPVD1-213ENST00000469498 RPAP2Q8IXW5 612 aaPredicted RBP10.44□□□□□ -0.74
GAPVD1-213ENST00000469498 KLHDC4Q8TBB5 520 aa10.44□□□□□ -0.74
GAPVD1-213ENST00000469498 NLRP3Q96P20 1036 aa10.44□□□□□ -0.74
GAPVD1-213ENST00000469498 SPON1Q9HCB6 807 aa10.44□□□□□ -0.74
GAPVD1-213ENST00000469498 BOLA1Q9Y3E2 137 aa10.44□□□□□ -0.74
GAPVD1-213ENST00000469498 FER1L6Q2WGJ9 1857 aa10.43□□□□□ -0.74
GAPVD1-213ENST00000469498 IGHDP01880 384 aa10.43□□□□□ -0.74
GAPVD1-213ENST00000469498 CSF1RP07333 972 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms