RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 DPF2Q92785 391 aa15.91■□□□□ 0.14
HDAC3-204ENST00000469207 WTIPA6NIX2 430 aaPredicted RBP15.9■□□□□ 0.14
HDAC3-204ENST00000469207 TSPYL6Q8N831 410 aa15.9■□□□□ 0.14
HDAC3-204ENST00000469207 ASTN2O75129 1339 aaPredicted RBP15.9■□□□□ 0.14
HDAC3-204ENST00000469207 CDHR2Q9BYE9 1310 aa15.9■□□□□ 0.14
HDAC3-204ENST00000469207 LRRC37AA6NMS7 1700 aa15.89■□□□□ 0.13
HDAC3-204ENST00000469207 ADM5C9JUS6 153 aa15.89■□□□□ 0.13
HDAC3-204ENST00000469207 GOLGA2Q08379 1002 aa15.89■□□□□ 0.13
HDAC3-204ENST00000469207 ZC3H12CQ9C0D7 883 aaKnown RBP15.89■□□□□ 0.13
HDAC3-204ENST00000469207 IFT57Q9NWB7 429 aa15.89■□□□□ 0.13
HDAC3-204ENST00000469207 POLR2AP24928 1970 aaKnown RBP15.88■□□□□ 0.13
HDAC3-204ENST00000469207 HUNKP57058 714 aa15.88■□□□□ 0.13
HDAC3-204ENST00000469207 GNAI1P63096 354 aa15.88■□□□□ 0.13
HDAC3-204ENST00000469207 CCDC184Q52MB2 194 aa15.88■□□□□ 0.13
HDAC3-204ENST00000469207 EYA3Q99504 573 aa15.88■□□□□ 0.13
HDAC3-204ENST00000469207 ANKIB1Q9P2G1 1089 aa15.88■□□□□ 0.13
HDAC3-204ENST00000469207 UFL1O94874 794 aa15.87■□□□□ 0.13
HDAC3-204ENST00000469207 KRT26Q7Z3Y9 468 aa15.87■□□□□ 0.13
HDAC3-204ENST00000469207 THSD7BQ9C0I4 1608 aa15.86■□□□□ 0.13
HDAC3-204ENST00000469207 CCDC85CA6NKD9 419 aa15.86■□□□□ 0.13
HDAC3-204ENST00000469207 PDE8AO60658 829 aa15.86■□□□□ 0.13
HDAC3-204ENST00000469207 PCCAP05165 728 aaPredicted RBP15.86■□□□□ 0.13
HDAC3-204ENST00000469207 VIL1P09327 827 aaKnown RBP15.86■□□□□ 0.13
HDAC3-204ENST00000469207 CCDC191Q8NCU4 936 aa15.86■□□□□ 0.13
HDAC3-204ENST00000469207 TSR2Q969E8 191 aaKnown RBP15.86■□□□□ 0.13
HDAC3-204ENST00000469207 HHIPL1Q96JK4 782 aa15.86■□□□□ 0.13
HDAC3-204ENST00000469207 METTL22Q9BUU2 404 aaPredicted RBP15.86■□□□□ 0.13
HDAC3-204ENST00000469207 CWC25Q9NXE8 425 aaPredicted RBP15.86■□□□□ 0.13
HDAC3-204ENST00000469207 PODXL2Q9NZ53 605 aa15.86■□□□□ 0.13
HDAC3-204ENST00000469207 SCAF8Q9UPN6 1271 aaKnown RBP15.86■□□□□ 0.13
HDAC3-204ENST00000469207 MAP3K2Q9Y2U5 619 aa15.86■□□□□ 0.13
HDAC3-204ENST00000469207 SCN9AQ15858 1988 aa15.86■□□□□ 0.13
HDAC3-204ENST00000469207 G3V3G9 751 aa15.85■□□□□ 0.13
HDAC3-204ENST00000469207 RPS12P25398 132 aaKnown RBP15.85■□□□□ 0.13
HDAC3-204ENST00000469207 KIF4BQ2VIQ3 1234 aa15.85■□□□□ 0.13
HDAC3-204ENST00000469207 DCAF8Q5TAQ9 597 aa15.85■□□□□ 0.13
HDAC3-204ENST00000469207 DCPSQ96C86 337 aaKnown RBP15.85■□□□□ 0.13
HDAC3-204ENST00000469207 GGA1Q9UJY5 639 aa15.85■□□□□ 0.13
HDAC3-204ENST00000469207 FAM155AB1AL88 458 aaPredicted RBP15.84■□□□□ 0.13
HDAC3-204ENST00000469207 IGKV5-2P06315 115 aa15.84■□□□□ 0.13
HDAC3-204ENST00000469207 CCDC152Q4G0S7 254 aa15.84■□□□□ 0.13
HDAC3-204ENST00000469207 G2E3Q7L622 706 aa15.84■□□□□ 0.13
HDAC3-204ENST00000469207 GBA2Q9HCG7 927 aaPredicted RBP15.84■□□□□ 0.13
HDAC3-204ENST00000469207 CASP8AP2Q9UKL3 1982 aa15.84■□□□□ 0.13
HDAC3-204ENST00000469207 PI4KAP2A4QPH2 592 aa15.83■□□□□ 0.12
HDAC3-204ENST00000469207 BRPF1P55201 1214 aaPredicted RBP15.83■□□□□ 0.12
HDAC3-204ENST00000469207 SCARF1Q14162 830 aa15.83■□□□□ 0.12
HDAC3-204ENST00000469207 CWF19L2Q2TBE0 894 aaKnown RBP15.83■□□□□ 0.12
HDAC3-204ENST00000469207 FAM161AQ3B820 660 aa15.83■□□□□ 0.12
HDAC3-204ENST00000469207 CCDC30Q5VVM6 783 aa15.83■□□□□ 0.12
HDAC3-204ENST00000469207 RGMBQ6NW40 437 aa15.83■□□□□ 0.12
HDAC3-204ENST00000469207 PI4KAP1Q8N8J0 262 aa15.83■□□□□ 0.12
HDAC3-204ENST00000469207 MXD3Q9BW11 206 aa15.83■□□□□ 0.12
HDAC3-204ENST00000469207 MCOLN1Q9GZU1 580 aa15.83■□□□□ 0.12
HDAC3-204ENST00000469207 GGA3Q9NZ52 723 aa15.83■□□□□ 0.12
HDAC3-204ENST00000469207 ANKRD18AQ8IVF6 992 aa15.82■□□□□ 0.12
HDAC3-204ENST00000469207 C2orf69Q8N8R5 385 aa15.82■□□□□ 0.12
HDAC3-204ENST00000469207 TTLL11Q8NHH1 800 aa15.82■□□□□ 0.12
HDAC3-204ENST00000469207 DDX58O95786 925 aaKnown RBP15.81■□□□□ 0.12
HDAC3-204ENST00000469207 ZNF157P51786 506 aaPredicted RBP15.81■□□□□ 0.12
HDAC3-204ENST00000469207 KIF23Q02241 960 aaPredicted RBP15.81■□□□□ 0.12
HDAC3-204ENST00000469207 CALD1Q05682 793 aaKnown RBP15.81■□□□□ 0.12
HDAC3-204ENST00000469207 NOGQ13253 232 aa15.81■□□□□ 0.12
HDAC3-204ENST00000469207 ANGEL2Q5VTE6 544 aaKnown RBP15.81■□□□□ 0.12
HDAC3-204ENST00000469207 RSBN1LQ6PCB5 846 aaPredicted RBP15.81■□□□□ 0.12
HDAC3-204ENST00000469207 KSR2Q6VAB6 950 aa15.81■□□□□ 0.12
HDAC3-204ENST00000469207 GREM2Q9H772 168 aa15.81■□□□□ 0.12
HDAC3-204ENST00000469207 ZNF280AP59817 542 aaPredicted RBP15.8■□□□□ 0.12
HDAC3-204ENST00000469207 PRAMEF18Q5VWM3 479 aa15.8■□□□□ 0.12
HDAC3-204ENST00000469207 SULF1Q8IWU6 871 aa15.8■□□□□ 0.12
HDAC3-204ENST00000469207 CDCA5Q96FF9 252 aa15.8■□□□□ 0.12
HDAC3-204ENST00000469207 GMLQ99445 158 aa15.8■□□□□ 0.12
HDAC3-204ENST00000469207 MINPP1Q9UNW1 487 aa15.8■□□□□ 0.12
HDAC3-204ENST00000469207 XDHP47989 1333 aa15.79■□□□□ 0.12
HDAC3-204ENST00000469207 CA12O43570 354 aa15.79■□□□□ 0.12
HDAC3-204ENST00000469207 HSP90B1P14625 803 aaKnown RBP15.79■□□□□ 0.12
HDAC3-204ENST00000469207 ATP2B4P23634 1241 aa15.79■□□□□ 0.12
HDAC3-204ENST00000469207 CTSWP56202 376 aa15.79■□□□□ 0.12
HDAC3-204ENST00000469207 DGKZQ13574 1117 aa15.79■□□□□ 0.12
HDAC3-204ENST00000469207 MOB2Q70IA6 237 aa15.79■□□□□ 0.12
HDAC3-204ENST00000469207 TXNRD3Q86VQ6 643 aa15.79■□□□□ 0.12
HDAC3-204ENST00000469207 TRPA1O75762 1119 aa15.78■□□□□ 0.12
HDAC3-204ENST00000469207 SLC4A2P04920 1241 aa15.78■□□□□ 0.12
HDAC3-204ENST00000469207 USP17L8P0C7I0 530 aa15.78■□□□□ 0.12
HDAC3-204ENST00000469207 AGBL3Q8NEM8 1001 aa15.78■□□□□ 0.12
HDAC3-204ENST00000469207 CSRNP1Q96S65 589 aa15.78■□□□□ 0.12
HDAC3-204ENST00000469207 MYOZ2Q9NPC6 264 aa15.78■□□□□ 0.12
HDAC3-204ENST00000469207 RNF186Q9NXI6 227 aa15.78■□□□□ 0.12
HDAC3-204ENST00000469207 USP17L3A6NCW0 530 aa15.77■□□□□ 0.12
HDAC3-204ENST00000469207 USP17L4A6NCW7 530 aa15.77■□□□□ 0.12
HDAC3-204ENST00000469207 NEURL1BA8MQ27 555 aa15.77■□□□□ 0.12
HDAC3-204ENST00000469207 NBPF9Q3BBW0 867 aa15.77■□□□□ 0.12
HDAC3-204ENST00000469207 USP17L1Q7RTZ2 530 aa15.77■□□□□ 0.12
HDAC3-204ENST00000469207 UBE3BQ7Z3V4 1068 aa15.77■□□□□ 0.12
HDAC3-204ENST00000469207 PODNQ7Z5L7 613 aa15.77■□□□□ 0.12
HDAC3-204ENST00000469207 WWC1Q8IX03 1113 aa15.77■□□□□ 0.12
HDAC3-204ENST00000469207 FBXW7Q969H0 707 aa15.77■□□□□ 0.12
HDAC3-204ENST00000469207 CCDC102AQ96A19 550 aa15.77■□□□□ 0.12
HDAC3-204ENST00000469207 BSDC1Q9NW68 430 aaPredicted RBP15.77■□□□□ 0.12
HDAC3-204ENST00000469207 SALL2Q9Y467 1007 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms